RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 GLYATL3Q5SZD4 288 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 LHFPL2Q6ZUX7 228 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 GPR141Q7Z602 305 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ZNF429Q86V71 674 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 NKAPQ8N5F7 415 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 OR8U1Q8NH10 309 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 NUBPLQ8TB37 319 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 MYDGFQ969H8 173 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 MAGOHBQ96A72 148 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 RANBP9Q96S59 729 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 CNN2Q99439 309 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 PAAF1Q9BRP4 392 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 NPCDR1Q9BY65 106 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 OR2B2Q9GZK3 357 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 NXF2Q9GZY0 626 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 NRN1Q9NPD7 142 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 NXT2Q9NPJ8 142 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 V9GYH0 126 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 MXRA5Q9NR99 2828 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 MYH14Q7Z406 1995 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 C20orf202A1L168 122 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 YKT6O15498 198 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 TPST1O60507 370 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 HMGB1P09429 215 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 GKN3PP0CG01 181 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 FOXA3P55318 350 aaPredicted RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 OR1D5P58170 312 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 PFN3P60673 137 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 RPL7AP62424 266 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 TNXAQ16473 311 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 PDZD11Q5EBL8 140 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 C5orf24Q7Z6I8 188 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 TRAPPC6BQ86SZ2 158 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 MARCH9Q86YJ5 346 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 OR2AP1Q8NGE2 309 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 SLC25A40Q8TBP6 338 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 CHCHD1Q96BP2 118 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 RCHY1Q96PM5 261 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 LRRC2Q9BYS8 371 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ZSCAN16Q9H4T2 348 aaPredicted RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 SFXN1Q9H9B4 322 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 NEK6Q9HC98 313 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 FAM30AQ9NZY2 134 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 PCTPQ9UKL6 214 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 UBE2D4Q9Y2X8 147 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 TRAPPC1Q9Y5R8 145 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 SERP1Q9Y6X1 66 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 PDZD2O15018 2839 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 RGPD2P0DJD1 1756 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 TRBV5-7A0A0A0MS05 114 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 IGHV2-70DA0A0C4DH43 119 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 H3BQF6 201 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 SYNGR1O43759 233 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 DPM2O94777 84 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 NXPH4O95158 308 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 RNASE2P10153 161 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 RPS3P23396 243 aaKnown RBP eCLIP1.08□□□□□ -2.24
XRN1-214ENST00000498077 SDC4P31431 198 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 CPOXP36551 454 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 PRLHRP49683 370 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 CRISP1P54107 249 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ARPP19P56211 112 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 TMEM33P57088 247 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ZNF121P58317 390 aaPredicted RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 FXYD4P59646 89 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 CKS1BP61024 79 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 RPL27P61353 136 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 COX6A2Q02221 97 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 MALLQ13021 153 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 AQP6Q13520 282 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 BECN1Q14457 450 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 TMEM183BQ1AE95 376 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 MICAQ29983 383 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 BEAN1Q3B7T3 259 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 RNASE12Q5GAN4 147 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 COA6Q5JTJ3 125 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 LINC00696Q6ZRV3 163 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ZNF826PQ6ZT77 177 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 GRINAQ7Z429 371 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 TMEM183AQ8IXX5 376 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ACBD7Q8N6N7 88 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 TCTEX1D1Q8N7M0 179 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 SIGLECL1Q8N7X8 197 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 C20orf203Q8NBC4 194 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 OR10G6Q8NH81 332 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 C11orf45Q8TAV5 145 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 FAM110DQ8TAY7 271 aaPredicted RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 DUX3Q96PT4 197 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 VKORC1Q9BQB6 163 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ZNF426Q9BUY5 554 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 TMEM191AQ9H0A3 160 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 RHOFQ9HBH0 211 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 TPRKBQ9Y3C4 175 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 NF1P21359 2839 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 DOCK11Q5JSL3 2073 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 IGHV7-81A0A0B4J1V7 117 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 TRAV40A0A0B4J280 105 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 A0A0U1RQS6 177 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 H0YL77 283 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms