RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ZNF439Q8NDP4 499 aa4.51□□□□□ -1.69
TMEM39A-212ENST00000497993 EEF1AKMT3Q96AZ1 226 aa4.51□□□□□ -1.69
TMEM39A-212ENST00000497993 GPER1Q99527 375 aa4.51□□□□□ -1.69
TMEM39A-212ENST00000497993 MGLLQ99685 303 aa4.51□□□□□ -1.69
TMEM39A-212ENST00000497993 TOLLIPQ9H0E2 274 aa4.51□□□□□ -1.69
TMEM39A-212ENST00000497993 ZNF702PQ9H963 129 aa4.51□□□□□ -1.69
TMEM39A-212ENST00000497993 ZNF286AQ9HBT8 521 aa4.51□□□□□ -1.69
TMEM39A-212ENST00000497993 ACOT13Q9NPJ3 140 aa4.51□□□□□ -1.69
TMEM39A-212ENST00000497993 NDUFB11Q9NX14 153 aa4.51□□□□□ -1.69
TMEM39A-212ENST00000497993 KCNIP1Q9NZI2 227 aa4.51□□□□□ -1.69
TMEM39A-212ENST00000497993 A0A087WW49 117 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 TRAV1-2A0A0B4J238 106 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 IGHV3-38A0A0C4DH36 116 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 A0A1B0GU03 582 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 TRDV1A0A1B0GX56 115 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 TMEM30CPA0ZSE6 113 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 LEUTXA8MZ59 168 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 M0QZK8 103 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 GEMIN2O14893 280 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 FGF16O43320 207 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 EIF3GO75821 320 aaKnown RBP eCLIP4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 ARL6IP5O75915 188 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 OR7C1O76099 320 aaPredicted RBP4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 TOMM40O96008 361 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 NAPSAO96009 420 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 MT-ND4P03905 459 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 FUT3P21217 361 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 MAS1LP35410 378 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 RPL29P47914 159 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 KRTAP10-3P60369 221 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 RPS25P62851 125 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 EMX1Q04741 257 aaPredicted RBP4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 NSUN5P1Q3KNT7 163 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 COX19Q49B96 90 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 TPTE2P1Q5T6R2 138 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 SYT6Q5T7P8 510 aaPredicted RBP4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 GLT8D1Q68CQ7 371 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 GLIPR1L1Q6UWM5 242 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 ACOT7LQ6ZUV0 252 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 MOB1BQ7L9L4 216 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 MRPL52Q86TS9 123 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 PDZD9Q8IXQ8 264 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 PUSL1Q8N0Z8 303 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 Q8N6K4 173 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 OR4C13Q8NGP0 309 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 OR10K1Q8NGX5 313 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 PTX4Q96A99 478 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 CST11Q9H112 138 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 PLEKHJ1Q9NW61 149 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 IDI2-AS1Q9NZ38 188 aa4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 AMMECR1Q9Y4X0 333 aaPredicted RBP4.5□□□□□ -1.69
TMEM39A-212ENST00000497993 MEIKINA0A087WXM9 373 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 TEX48A0A1B0GUV7 120 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 ZNF705EA8MWA4 302 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 SMIM1B2RUZ4 78 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 CCRL2O00421 344 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 GCGP01275 180 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 RAB4AP20338 218 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 RAB5AP20339 215 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 COX7A1P24310 79 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 BRS3P32247 399 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 SSTR5P35346 364 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 GLP1RP43220 463 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 ALDH3B2P48448 385 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 RAB7AP51149 207 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 PSMD7P51665 324 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 FABP5Q01469 135 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 PRB3Q04118 309 aaPredicted RBP4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 HERPUD1Q15011 391 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 HMGN3Q15651 99 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 HSD17B12Q53GQ0 312 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 AWAT2Q6E213 333 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 ZNF773Q6PK81 442 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 BAIAP2L2Q6UXY1 529 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 Q6ZN92 141 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 TRAPPC6BQ86SZ2 158 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 NR2C2APQ86WQ0 139 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 LFNGQ8NES3 379 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 SCGB3A2Q96PL1 93 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 S100A13Q99584 98 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 TSNAXQ99598 290 aaKnown RBP4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 RARRES2Q99969 163 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 AGMATQ9BSE5 352 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 NICN1Q9BSH3 213 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 Q9H521 79 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 JPT1Q9UK76 154 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 PSG11Q9UQ72 335 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 LRRC42Q9Y546 428 aa4.49□□□□□ -1.69
TMEM39A-212ENST00000497993 PNMA8CA0A1B0GUJ8 204 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 C12orf77C9JDV5 145 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 MCRIP1C9JLW8 97 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 SMKR1H3BMG3 65 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 AIPO00170 330 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 YPEL1O60688 119 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 ORM1P02763 201 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 MAS1P04201 325 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 RBMY1CP0DJD4 496 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 CT45A10P0DMU9 189 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 OMGP23515 440 aa4.48□□□□□ -1.69
TMEM39A-212ENST00000497993 MAP2K4P45985 399 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms