RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 C21orf62Q9NYP8 219 aa5.36□□□□□ -1.55
VPS45-210ENST00000497638 TMED3Q9Y3Q3 217 aa5.36□□□□□ -1.55
VPS45-210ENST00000497638 VPS13BQ7Z7G8 4022 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 TMEM189A5PLL7 270 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 ERICH4A6NGS2 130 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 EI24O14681 340 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 SLC22A5O76082 557 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 MBPP02686 304 aaPredicted RBP5.35□□□□□ -1.55
VPS45-210ENST00000497638 EIF4EP06730 217 aaKnown RBP5.35□□□□□ -1.55
VPS45-210ENST00000497638 FCGR3AP08637 254 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 SPART-AS1P0CW21 52 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 TMEM50BP56557 158 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 OR2B8PP59922 312 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 OR2B11Q5JQS5 317 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 Q5VSD8 79 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 HSD17B13Q7Z5P4 300 aaPredicted RBP5.35□□□□□ -1.55
VPS45-210ENST00000497638 H1FOOQ8IZA3 346 aaPredicted RBP5.35□□□□□ -1.55
VPS45-210ENST00000497638 CSNK1G2-AS1Q8NCQ2 148 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 PHYHIPQ92561 330 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 FRZBQ92765 325 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 ZNF414Q96IQ9 312 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 OR10C1Q96KK4 312 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 YTHDF1Q9BYJ9 559 aaKnown RBP5.35□□□□□ -1.55
VPS45-210ENST00000497638 MS4A6AQ9H2W1 248 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 ZNF446Q9NWS9 450 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 BET1LQ9NYM9 111 aa5.35□□□□□ -1.55
VPS45-210ENST00000497638 DIMT1Q9UNQ2 313 aaKnown RBP5.35□□□□□ -1.55
VPS45-210ENST00000497638 RBMX2Q9Y388 322 aaKnown RBP5.35□□□□□ -1.55
VPS45-210ENST00000497638 IGHV3-49A0A0A0MS15 119 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 TRAV14DV4A0A0A6YYC5 116 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 NUPL2O15504 423 aaKnown RBP5.34□□□□□ -1.55
VPS45-210ENST00000497638 YIF1AO95070 293 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 RPL30P62888 115 aaKnown RBP5.34□□□□□ -1.55
VPS45-210ENST00000497638 P2RY14Q15391 338 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 TIMM50Q3ZCQ8 353 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 Q56UQ5 140 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 LRRTM1Q86UE6 522 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 C15orf53Q8NAA6 179 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 UBAC2Q8NBM4 344 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 ZNF485Q8NCK3 441 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 DUSP18Q8NEJ0 188 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 OR56B1Q8NGI3 324 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 TCTEX1D2Q8WW35 142 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 APH1BQ8WW43 257 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 GRAMD2BQ96HH9 432 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 HSD17B10Q99714 261 aaKnown RBP5.34□□□□□ -1.55
VPS45-210ENST00000497638 GINS3Q9BRX5 216 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 C1QTNF4Q9BXJ3 329 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 COMMD5Q9GZQ3 224 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 CLEC5AQ9NY25 188 aa5.34□□□□□ -1.55
VPS45-210ENST00000497638 IGHV3OR16-13A0A075B7E8 117 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 IGHV3-74A0A0B4J1X5 117 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 PNMA8CA0A1B0GUJ8 204 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 ST8SIA3O43173 380 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 SERPINE2P07093 398 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 CTSGP08311 255 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 CD37P11049 281 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 GNGT1P63211 74 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 OXA1LQ15070 435 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 RBM48Q5RL73 367 aaKnown RBP5.33□□□□□ -1.56
VPS45-210ENST00000497638 UBE2UQ5VVX9 321 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 SLC25A24Q6NUK1 477 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 ZNF773Q6PK81 442 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 Q6ZS49 121 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 LYPD1Q8N2G4 141 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 FAM24BQ8N5W8 94 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 ATG101Q9BSB4 218 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 RBM38Q9H0Z9 239 aaKnown RBP5.33□□□□□ -1.56
VPS45-210ENST00000497638 TMEM231Q9H6L2 316 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 VSIRQ9H7M9 311 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 HRASLSQ9HDD0 168 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 CLEC2DQ9UHP7 191 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 RABAC1Q9UI14 185 aa5.33□□□□□ -1.56
VPS45-210ENST00000497638 IGHV3-21A0A0B4J1V1 117 aa5.32□□□□□ -1.56
VPS45-210ENST00000497638 K7EIM0 57 aa5.32□□□□□ -1.56
VPS45-210ENST00000497638 HLA-DQB1P01920 261 aa5.32□□□□□ -1.56
VPS45-210ENST00000497638 OR13C7P0DN81 318 aa5.32□□□□□ -1.56
VPS45-210ENST00000497638 GNB3P16520 340 aa5.32□□□□□ -1.56
VPS45-210ENST00000497638 MT3P25713 68 aa5.32□□□□□ -1.56
VPS45-210ENST00000497638 FGF9P31371 208 aaPredicted RBP5.32□□□□□ -1.56
VPS45-210ENST00000497638 NUTF2P61970 127 aaKnown RBP5.32□□□□□ -1.56
VPS45-210ENST00000497638 TMEM88Q6PEY1 159 aa5.32□□□□□ -1.56
VPS45-210ENST00000497638 CCDC197Q8NCU1 140 aa5.32□□□□□ -1.56
VPS45-210ENST00000497638 ZNRF2Q8NHG8 242 aa5.32□□□□□ -1.56
VPS45-210ENST00000497638 MAFIPQ8WZ33 124 aa5.32□□□□□ -1.56
VPS45-210ENST00000497638 NIPSNAP3BQ9BS92 247 aa5.32□□□□□ -1.56
VPS45-210ENST00000497638 PTTG2Q9NZH5 202 aa5.32□□□□□ -1.56
VPS45-210ENST00000497638 OR2W1Q9Y3N9 320 aa5.32□□□□□ -1.56
VPS45-210ENST00000497638 F11RQ9Y624 299 aaKnown RBP5.32□□□□□ -1.56
VPS45-210ENST00000497638 LOC100130705A0A1B0GUX0 176 aa5.31□□□□□ -1.56
VPS45-210ENST00000497638 EFCAB10A6NFE3 127 aa5.31□□□□□ -1.56
VPS45-210ENST00000497638 SMIM9A6NGZ8 99 aa5.31□□□□□ -1.56
VPS45-210ENST00000497638 KNCNA6PVL3 124 aa5.31□□□□□ -1.56
VPS45-210ENST00000497638 K7EQG2 157 aa5.31□□□□□ -1.56
VPS45-210ENST00000497638 UPK2O00526 184 aa5.31□□□□□ -1.56
VPS45-210ENST00000497638 SLC17A2O00624 439 aa5.31□□□□□ -1.56
VPS45-210ENST00000497638 RBFOX2O43251 390 aaKnown RBP eCLIP5.31□□□□□ -1.56
VPS45-210ENST00000497638 WBP4O75554 376 aaKnown RBP5.31□□□□□ -1.56
VPS45-210ENST00000497638 CTXN2P0C2S0 81 aa5.31□□□□□ -1.56
VPS45-210ENST00000497638 TRAPPC2P0DI81 140 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms