RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 HIST1H3AP68431 136 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 H3F3AP84243 136 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 FADDQ13158 208 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 NNATQ16517 81 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 TMEM97Q5BJF2 176 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 FAM173BQ6P4H8 233 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 AAED1Q7RTV5 226 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 Q96M85 177 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 TMEM147Q9BVK8 224 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 YIPF3Q9GZM5 350 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 CCDC90BQ9GZT6 254 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 CYSTM1Q9H1C7 97 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 DCSTAMPQ9H295 470 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 C11orf68Q9H3H3 251 aaKnown RBP1.44□□□□□ -2.18
SMC4-225ENST00000497203 GLTPQ9NZD2 209 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 CKLFQ9UBR5 152 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 CCDC88AQ3V6T2 1871 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 A0A087WUJ7 227 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 IGKV1D-43A0A0B4J1Z2 117 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 FUOMA2VDF0 154 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 CNIH1O95406 144 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 RBP1P09455 135 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 RPS20P60866 119 aaKnown RBP1.43□□□□□ -2.18
SMC4-225ENST00000497203 ZNF345Q14585 488 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 CDK10Q15131 360 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 FP248Q71RG6 208 aaPredicted RBP1.43□□□□□ -2.18
SMC4-225ENST00000497203 MIR17HGQ75NE6 70 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 WFDC11Q8NEX6 87 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 CT55Q8WUE5 264 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 H1FXQ92522 213 aaKnown RBP1.43□□□□□ -2.18
SMC4-225ENST00000497203 GINS4Q9BRT9 223 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 SLC39A9Q9NUM3 307 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 LHFPL6Q9Y693 200 aa1.43□□□□□ -2.18
SMC4-225ENST00000497203 BAZ2BQ9UIF8 2168 aaKnown RBP1.42□□□□□ -2.18
SMC4-225ENST00000497203 A0A0D9SG52 128 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 HTR1AP08908 422 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 SMIM10L2AP0DMW4 78 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 SMIM10L2BP0DMW5 78 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 KISS1Q15726 138 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 DEFB128Q7Z7B8 93 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 KRT222Q8N1A0 295 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 LINC00471Q8N535 108 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 C9orf163Q8N9P6 203 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 PFN4Q8NHR9 129 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 TP73-AS1Q9UF72 201 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 FBXO5Q9UKT4 447 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 KIF24Q5T7B8 1368 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 TONSLQ96HA7 1378 aa1.42□□□□□ -2.18
SMC4-225ENST00000497203 TOPBP1Q92547 1522 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 FAM236DA0A1B0GTK5 79 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 hADV38S2A0JD32 116 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 TMEM210A6NLX4 147 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 FADS1O60427 444 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 HAND1O96004 215 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 FAM236CP0DP71 79 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 G6PCP35575 357 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 LCN15Q6UWW0 184 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 DPPA3Q6W0C5 159 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 OOSP2Q86WS3 158 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 BPIFA4PQ86YQ2 179 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 GDPD1Q8N9F7 314 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 DNAJC9Q8WXX5 260 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 PRAP1Q96NZ9 151 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 TLNRD1Q9H1K6 362 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 MED9Q9NWA0 146 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 PRELID3BQ9Y3B1 194 aa1.41□□□□□ -2.18
SMC4-225ENST00000497203 FCGBPQ9Y6R7 5405 aaPredicted RBP1.41□□□□□ -2.18
SMC4-225ENST00000497203 TTC21AQ8NDW8 1320 aa1.4□□□□□ -2.18
SMC4-225ENST00000497203 PDE6DO43924 150 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 OR5F1O95221 314 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 TCL1BO95988 128 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 CLPSP04118 112 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 CTXN2P0C2S0 81 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 UBBP0CG47 229 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 REEP5Q00765 189 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 RUNX1Q01196 453 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 TRAPPC6BQ86SZ2 158 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 CLVS1Q8IUQ0 354 aaPredicted RBP1.4□□□□□ -2.19
SMC4-225ENST00000497203 ZNF439Q8NDP4 499 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 OR4D11Q8NGI4 311 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 TERB2Q8NHR7 220 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 BTF3L4Q96K17 158 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 C2orf50Q96LR7 162 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 MIXL1Q9H2W2 232 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 ERGIC3Q9Y282 383 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 MED12LQ86YW9 2145 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 PIK3C2GO75747 1445 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 ZFYVE9O95405 1425 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 RIC1Q4ADV7 1423 aa1.4□□□□□ -2.19
SMC4-225ENST00000497203 HEATR5BQ9P2D3 2071 aa1.39□□□□□ -2.19
SMC4-225ENST00000497203 RTL1A6NKG5 1358 aa1.39□□□□□ -2.19
SMC4-225ENST00000497203 C19orf84I3L1E1 186 aa1.39□□□□□ -2.19
SMC4-225ENST00000497203 MRPS14O60783 128 aaKnown RBP1.39□□□□□ -2.19
SMC4-225ENST00000497203 SERPINE1P05121 402 aa1.39□□□□□ -2.19
SMC4-225ENST00000497203 COX6A1P12074 109 aa1.39□□□□□ -2.19
SMC4-225ENST00000497203 PPIBP23284 216 aaKnown RBP1.39□□□□□ -2.19
SMC4-225ENST00000497203 S100A4P26447 101 aaKnown RBP1.39□□□□□ -2.19
SMC4-225ENST00000497203 DEFA1P59665 94 aa1.39□□□□□ -2.19
SMC4-225ENST00000497203 C12orf74Q32Q52 190 aa1.39□□□□□ -2.19
SMC4-225ENST00000497203 ZNF826PQ6ZT77 177 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms