RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 TNFSF18Q9UNG2 199 aa14.26□□□□□ -0.13
RGP1-202ENST00000496906 TMEM89A2RUT3 159 aa14.26□□□□□ -0.13
RGP1-202ENST00000496906 CYB5BO43169 146 aa14.26□□□□□ -0.13
RGP1-202ENST00000496906 IFNA4P05014 189 aa14.26□□□□□ -0.13
RGP1-202ENST00000496906 HIST1H1BP16401 226 aaKnown RBP14.26□□□□□ -0.13
RGP1-202ENST00000496906 PSMB8P28062 276 aa14.26□□□□□ -0.13
RGP1-202ENST00000496906 TEX38Q6PEX7 206 aa14.26□□□□□ -0.13
RGP1-202ENST00000496906 ETV3LQ6ZN32 361 aa14.26□□□□□ -0.13
RGP1-202ENST00000496906 ZNF546Q86UE3 836 aa14.26□□□□□ -0.13
RGP1-202ENST00000496906 KLHDC1Q8N7A1 406 aa14.26□□□□□ -0.13
RGP1-202ENST00000496906 RNF114Q9Y508 228 aa14.26□□□□□ -0.13
RGP1-202ENST00000496906 PRSS46E5RG02 174 aa14.25□□□□□ -0.13
RGP1-202ENST00000496906 CORTO00230 105 aa14.25□□□□□ -0.13
RGP1-202ENST00000496906 OR2J3O76001 311 aa14.25□□□□□ -0.13
RGP1-202ENST00000496906 RPL12P30050 165 aaKnown RBP14.25□□□□□ -0.13
RGP1-202ENST00000496906 PROK1P58294 105 aa14.25□□□□□ -0.13
RGP1-202ENST00000496906 EWSR1Q01844 656 aaKnown RBP eCLIP14.25□□□□□ -0.13
RGP1-202ENST00000496906 HAPLN4Q86UW8 402 aa14.25□□□□□ -0.13
RGP1-202ENST00000496906 RNASEH2CQ8TDP1 164 aaKnown RBP14.25□□□□□ -0.13
RGP1-202ENST00000496906 MISP3Q96FF7 219 aa14.25□□□□□ -0.13
RGP1-202ENST00000496906 MS4A10Q96PG2 267 aa14.25□□□□□ -0.13
RGP1-202ENST00000496906 SLC25A31Q9H0C2 315 aa14.25□□□□□ -0.13
RGP1-202ENST00000496906 KLK15Q9H2R5 256 aa14.25□□□□□ -0.13
RGP1-202ENST00000496906 A0A1B0GUS0 222 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 ARPC5O15511 151 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 CST7O76096 145 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 ELANEP08246 267 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 PF4V1P10720 104 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 SULT1A1P50225 295 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 RHOGP84095 191 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 DEFA5Q01523 94 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 FOXE3Q13461 319 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 KRTAP24-1Q3LI83 254 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 STX12Q86Y82 276 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 COMMD1Q8N668 190 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 AQP10Q96PS8 301 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 SLA2Q9H6Q3 261 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 THYN1Q9P016 225 aa14.24□□□□□ -0.13
RGP1-202ENST00000496906 RNF222A6NCQ9 220 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 HMSDA8MTL9 139 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 TRGV3P03979 118 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 RAB9AP51151 201 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 RIPPLY3P57055 190 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 TPPP2P59282 170 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 NHLH2Q02577 135 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 BAXQ07812 192 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 ARL16Q0P5N6 197 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 EXOSC2Q13868 293 aaKnown RBP14.23□□□□□ -0.13
RGP1-202ENST00000496906 ZFP69Q49AA0 526 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 OR8G2PQ6IF36 304 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 LCNL1Q6ZST4 164 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 RNF152Q8N8N0 203 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 NECAP1Q8NC96 275 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 OR5AU1Q8NGC0 362 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 PINX1Q96BK5 328 aaKnown RBP14.23□□□□□ -0.13
RGP1-202ENST00000496906 FNDC4Q9H6D8 234 aaPredicted RBP14.23□□□□□ -0.13
RGP1-202ENST00000496906 FBXL7Q9UJT9 491 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 ATRQ13535 2644 aa14.23□□□□□ -0.13
RGP1-202ENST00000496906 I3L2K1 104 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 K7EIM0 57 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 NDUFB8O95169 186 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 MT-CO2P00403 227 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 OPRK1P41145 380 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 FOXL1Q12952 345 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 TMEM217Q8N7C4 229 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 INO80EQ8NBZ0 244 aaPredicted RBP14.22□□□□□ -0.13
RGP1-202ENST00000496906 OR10P1Q8NGE3 313 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 HYLS1Q96M11 299 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 FAM223BA6NKX1 122 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 HAX1O00165 279 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 SCAF4O95104 1147 aaKnown RBP14.22□□□□□ -0.13
RGP1-202ENST00000496906 NUP62P37198 522 aaPredicted RBP14.22□□□□□ -0.13
RGP1-202ENST00000496906 CD69Q07108 199 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 ACOT7LQ6ZUV0 252 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 FAM223AQ8IWN6 122 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 MYOZ3Q8TDC0 251 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 BSCL2Q96G97 398 aaPredicted RBP14.22□□□□□ -0.13
RGP1-202ENST00000496906 HSPB11Q9Y547 144 aa14.22□□□□□ -0.13
RGP1-202ENST00000496906 IGHV3-21A0A0B4J1V1 117 aa14.21□□□□□ -0.14
RGP1-202ENST00000496906 RPLP1P05386 114 aaKnown RBP14.21□□□□□ -0.14
RGP1-202ENST00000496906 MLANAQ16655 118 aa14.21□□□□□ -0.14
RGP1-202ENST00000496906 C15orf32Q32M92 178 aa14.21□□□□□ -0.14
RGP1-202ENST00000496906 TCTEX1D4Q5JR98 221 aa14.21□□□□□ -0.14
RGP1-202ENST00000496906 OR4X2Q8NGF9 303 aa14.21□□□□□ -0.14
RGP1-202ENST00000496906 MFFQ9GZY8 342 aa14.21□□□□□ -0.14
RGP1-202ENST00000496906 MFSD2BA6NFX1 497 aa14.2□□□□□ -0.14
RGP1-202ENST00000496906 GPX4P36969 197 aaPredicted RBP14.2□□□□□ -0.14
RGP1-202ENST00000496906 HBG1P69891 147 aa14.2□□□□□ -0.14
RGP1-202ENST00000496906 HBG2P69892 147 aa14.2□□□□□ -0.14
RGP1-202ENST00000496906 SLC38A11Q08AI6 406 aa14.2□□□□□ -0.14
RGP1-202ENST00000496906 KIAA0141Q14154 515 aaPredicted RBP14.2□□□□□ -0.14
RGP1-202ENST00000496906 SLC16A13Q7RTY0 426 aa14.2□□□□□ -0.14
RGP1-202ENST00000496906 SCARB1Q8WTV0 552 aa14.2□□□□□ -0.14
RGP1-202ENST00000496906 USMG5Q96IX5 58 aa14.2□□□□□ -0.14
RGP1-202ENST00000496906 ZC4H2Q9NQZ6 224 aa14.2□□□□□ -0.14
RGP1-202ENST00000496906 RPS10-NUDT3A0A1W2PQS6 291 aa14.19□□□□□ -0.14
RGP1-202ENST00000496906 IGHV3-48P01763 117 aa14.19□□□□□ -0.14
RGP1-202ENST00000496906 S100A11P31949 105 aa14.19□□□□□ -0.14
RGP1-202ENST00000496906 EIF2B2P49770 351 aaKnown RBP14.19□□□□□ -0.14
RGP1-202ENST00000496906 AP2S1P53680 142 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms