RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 PET100P0DJ07 73 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 MFAP2P55001 183 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 VAMP2P63027 116 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 LRRC37A5PQ49AS3 106 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 KHDC1LQ5JSQ8 128 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 C11orf87Q6NUJ2 197 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 CITED1Q99966 193 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 PSENENQ9NZ42 101 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 FBXL7Q9UJT9 491 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 DMRT1Q9Y5R6 373 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 TSSC4Q9Y5U2 329 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-222ENST00000496567 BOLA2-SMG1P6H3BVE0 249 aa16.93■□□□□ 0.3
C9orf3-222ENST00000496567 RPL23AP62750 156 aaKnown RBP16.93■□□□□ 0.3
C9orf3-222ENST00000496567 PVRIGQ6DKI7 326 aa16.93■□□□□ 0.3
C9orf3-222ENST00000496567 ZNF491Q8N8L2 437 aa16.93■□□□□ 0.3
C9orf3-222ENST00000496567 UBE2E2Q96LR5 201 aa16.93■□□□□ 0.3
C9orf3-222ENST00000496567 CITED2Q99967 270 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-222ENST00000496567 STRAPQ9Y3F4 350 aaKnown RBP16.93■□□□□ 0.3
C9orf3-222ENST00000496567 COL6A5A8TX70 2615 aa16.92■□□□□ 0.3
C9orf3-222ENST00000496567 DEDDO75618 318 aa16.92■□□□□ 0.3
C9orf3-222ENST00000496567 CDX1P47902 265 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-222ENST00000496567 RAB11AP62491 216 aa16.92■□□□□ 0.3
C9orf3-222ENST00000496567 ATP5G2Q06055 141 aa16.92■□□□□ 0.3
C9orf3-222ENST00000496567 KIAA0141Q14154 515 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-222ENST00000496567 SPANXN5Q5MJ07 72 aa16.92■□□□□ 0.3
C9orf3-222ENST00000496567 TCTE3Q8IZS6 198 aa16.92■□□□□ 0.3
C9orf3-222ENST00000496567 MISP3Q96FF7 219 aa16.92■□□□□ 0.3
C9orf3-222ENST00000496567 SMLR1H3BR10 107 aa16.91■□□□□ 0.3
C9orf3-222ENST00000496567 TSC22D2O75157 780 aa16.91■□□□□ 0.3
C9orf3-222ENST00000496567 NDUFB8O95169 186 aa16.91■□□□□ 0.3
C9orf3-222ENST00000496567 PAX9P55771 341 aa16.91■□□□□ 0.3
C9orf3-222ENST00000496567 RAP2BP61225 183 aa16.91■□□□□ 0.3
C9orf3-222ENST00000496567 EXOSC2Q13868 293 aaKnown RBP16.91■□□□□ 0.3
C9orf3-222ENST00000496567 C15orf32Q32M92 178 aa16.91■□□□□ 0.3
C9orf3-222ENST00000496567 RNASEH2CQ8TDP1 164 aaKnown RBP16.91■□□□□ 0.3
C9orf3-222ENST00000496567 PPP1R14BQ96C90 147 aa16.91■□□□□ 0.3
C9orf3-222ENST00000496567 CXorf58Q96LI9 332 aa16.91■□□□□ 0.3
C9orf3-222ENST00000496567 H3BP45 60 aa16.9■□□□□ 0.3
C9orf3-222ENST00000496567 MPC2O95563 127 aa16.9■□□□□ 0.3
C9orf3-222ENST00000496567 TMEM50AO95807 157 aa16.9■□□□□ 0.3
C9orf3-222ENST00000496567 HNRNPCP07910 306 aaKnown RBP eCLIP16.9■□□□□ 0.36e-9■■□□□ 11.5
C9orf3-222ENST00000496567 SHISA2Q6UWI4 295 aa16.9■□□□□ 0.3
C9orf3-222ENST00000496567 PAIP2BQ9ULR5 123 aaKnown RBP16.9■□□□□ 0.3
C9orf3-222ENST00000496567 C15orf62A8K5M9 175 aa16.89■□□□□ 0.3
C9orf3-222ENST00000496567 IFNA4P05014 189 aa16.89■□□□□ 0.3
C9orf3-222ENST00000496567 OR8U8P0C7N1 319 aa16.89■□□□□ 0.3
C9orf3-222ENST00000496567 DEFA5Q01523 94 aa16.89■□□□□ 0.3
C9orf3-222ENST00000496567 FGL1Q08830 312 aa16.89■□□□□ 0.3
C9orf3-222ENST00000496567 NDUFA11Q86Y39 141 aa16.89■□□□□ 0.3
C9orf3-222ENST00000496567 VN1R17PQ8TDU5 208 aa16.89■□□□□ 0.3
C9orf3-222ENST00000496567 TMEM170AQ8WVE7 144 aa16.89■□□□□ 0.3
C9orf3-222ENST00000496567 PINX1Q96BK5 328 aaKnown RBP16.89■□□□□ 0.3
C9orf3-222ENST00000496567 C11orf1Q9H5F2 150 aa16.89■□□□□ 0.3
C9orf3-222ENST00000496567 E5RGE8 158 aa16.89■□□□□ 0.29
C9orf3-222ENST00000496567 OR4C12Q96R67 309 aa16.89■□□□□ 0.29
C9orf3-222ENST00000496567 MT-CO2P00403 227 aa16.88■□□□□ 0.29
C9orf3-222ENST00000496567 OPRK1P41145 380 aa16.88■□□□□ 0.29
C9orf3-222ENST00000496567 PRSS54Q6PEW0 395 aa16.88■□□□□ 0.29
C9orf3-222ENST00000496567 EEF1AKMT3Q96AZ1 226 aa16.88■□□□□ 0.29
C9orf3-222ENST00000496567 TENM1Q9UKZ4 2725 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 RPS10-NUDT3A0A1W2PQS6 291 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 NUDT19A8MXV4 375 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 H0YIZ8 118 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 I3L2K1 104 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 K7EIM0 57 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 IGHV3-11P01762 117 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 CAV2P51636 162 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 Q5BKY6 102 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 FAM209BQ5JX69 171 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 HIST2H2BDQ6DRA6 164 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 TMEM14EPQ6UXP3 125 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 ETV3LQ6ZN32 361 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 KLHL30-AS1Q8NEE0 82 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 OR2T35Q8NGX2 323 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 THAP6Q8TBB0 222 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 C4orf3Q8WVX3 66 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 GNB4Q9HAV0 340 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 LYRM2Q9NU23 88 aaPredicted RBP16.87■□□□□ 0.29
C9orf3-222ENST00000496567 OR5AC2Q9NZP5 309 aa16.87■□□□□ 0.29
C9orf3-222ENST00000496567 TRBV7-1A0A0A6YYK4 115 aa16.86■□□□□ 0.29
C9orf3-222ENST00000496567 ETFRF1Q6IPR1 90 aa16.86■□□□□ 0.29
C9orf3-222ENST00000496567 SCARB1Q8WTV0 552 aa16.86■□□□□ 0.29
C9orf3-222ENST00000496567 A0A1W2PRX2 142 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 MFSD2BA6NFX1 497 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 G3V3Q6 166 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 LGALS1P09382 135 aaKnown RBP16.85■□□□□ 0.29
C9orf3-222ENST00000496567 P2RY1P47900 373 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 RUNX1Q01196 453 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 NSUN5P1Q3KNT7 163 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 ZFP69Q49AA0 526 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 ZNF343Q6P1L6 599 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 OR5B12Q96R08 314 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 RNF126Q9BV68 326 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 C21orf62Q9NYP8 219 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 IGHV3-21A0A0B4J1V1 117 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 SCAF4O95104 1147 aaKnown RBP16.85■□□□□ 0.29
C9orf3-222ENST00000496567 C1QBP02746 253 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 ATP6V0BQ99437 205 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 MBD2Q9UBB5 411 aa16.85■□□□□ 0.29
C9orf3-222ENST00000496567 FAM24AA6NFZ4 105 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms