RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 OXA1LQ15070 435 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 ANKRD55Q3KP44 614 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 METTL26Q96S19 204 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 ZNF580Q9UK33 172 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 F11RQ9Y624 299 aaKnown RBP6.84□□□□□ -1.31
U2AF1-212ENST00000496462 IGHV7-81A0A0B4J1V7 117 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 IGF1P05019 195 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 CNTFRP26992 372 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 P2RY1P47900 373 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 CMC4P56277 68 aaPredicted RBP6.84□□□□□ -1.31
U2AF1-212ENST00000496462 RBPMS2Q6ZRY4 209 aaKnown RBP6.84□□□□□ -1.31
U2AF1-212ENST00000496462 RNF2Q99496 336 aa6.84□□□□□ -1.31
U2AF1-212ENST00000496462 SDHCQ99643 169 aaPredicted RBP6.84□□□□□ -1.31
U2AF1-212ENST00000496462 PEF1Q9UBV8 284 aaKnown RBP6.84□□□□□ -1.31
U2AF1-212ENST00000496462 TAAR5O14804 337 aa6.84□□□□□ -1.32
U2AF1-212ENST00000496462 FCN3O75636 299 aa6.84□□□□□ -1.32
U2AF1-212ENST00000496462 REG1AP05451 166 aa6.84□□□□□ -1.32
U2AF1-212ENST00000496462 SLC38A11Q08AI6 406 aa6.84□□□□□ -1.32
U2AF1-212ENST00000496462 ZNF585BQ52M93 769 aa6.84□□□□□ -1.32
U2AF1-212ENST00000496462 AWAT1Q58HT5 328 aa6.84□□□□□ -1.32
U2AF1-212ENST00000496462 LCNL1Q6ZST4 164 aa6.84□□□□□ -1.32
U2AF1-212ENST00000496462 ZNF546Q86UE3 836 aa6.84□□□□□ -1.32
U2AF1-212ENST00000496462 TTC9CQ8N5M4 171 aa6.84□□□□□ -1.32
U2AF1-212ENST00000496462 Q8N6K4 173 aa6.84□□□□□ -1.32
U2AF1-212ENST00000496462 OR1L4Q8NGR5 311 aa6.84□□□□□ -1.32
U2AF1-212ENST00000496462 LINC01006Q8NI28 216 aa6.84□□□□□ -1.32
U2AF1-212ENST00000496462 UBE2E2Q96LR5 201 aa6.84□□□□□ -1.32
U2AF1-212ENST00000496462 LINC01619G3V211 115 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 ZNF616Q08AN1 781 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 FCN2Q15485 313 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 OR1N2Q8NGR9 330 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 OR5B12Q96R08 314 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 ATP6V0BQ99437 205 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 PBDC1Q9BVG4 233 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 GGACTQ9BVM4 153 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 A0A0D9SG52 128 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 A0A1W2PPV4 95 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 DNASE2O00115 360 aaPredicted RBP6.83□□□□□ -1.32
U2AF1-212ENST00000496462 IGHV3-11P01762 117 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 PRH1P02810 166 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 HSPB1P04792 205 aaKnown RBP6.83□□□□□ -1.32
U2AF1-212ENST00000496462 MDKP21741 143 aaPredicted RBP6.83□□□□□ -1.32
U2AF1-212ENST00000496462 NPVFQ9HCQ7 196 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 TMEM14BQ9NUH8 114 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 HSPB7Q9UBY9 170 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 C7orf66A4D0T2 115 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 RPL12P30050 165 aaKnown RBP6.83□□□□□ -1.32
U2AF1-212ENST00000496462 C15orf32Q32M92 178 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 C2orf83Q53S99 150 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 SAMD13Q5VXD3 122 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 PRSS54Q6PEW0 395 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 SLC16A13Q7RTY0 426 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 IQCF2Q8IXL9 164 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 TMEM217Q8N7C4 229 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 MARC2Q969Z3 335 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 NOL4LQ96MY1 436 aaPredicted RBP6.83□□□□□ -1.32
U2AF1-212ENST00000496462 MDFIQ99750 246 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 PPP1R14DQ9NXH3 145 aa6.83□□□□□ -1.32
U2AF1-212ENST00000496462 H3BP45 60 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 MPDU1O75352 247 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 MBP02144 154 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 SULT1A1P50225 295 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 TAS2R45P59539 299 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 DLK1P80370 383 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 AKR1C8PQ5T2L2 129 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 ZNF600Q6ZNG1 722 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 PPP1R1CQ8WVI7 109 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 HYLS1Q96M11 299 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 MFFQ9GZY8 342 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 NDUFA4L2Q9NRX3 87 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 NBEAL1Q6ZS30 2694 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 FCN1O00602 326 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 COX7A2P2O60397 106 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 SIX6O95475 246 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 LGALS1P09382 135 aaKnown RBP6.82□□□□□ -1.32
U2AF1-212ENST00000496462 OR5G3P0C626 314 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 RAB14P61106 215 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 RAB32Q13637 225 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 CLEC19AQ6UXS0 136 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 STPG3Q8N7X2 389 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 GNPNAT1Q96EK6 184 aaPredicted RBP6.82□□□□□ -1.32
U2AF1-212ENST00000496462 BSCL2Q96G97 398 aaPredicted RBP6.82□□□□□ -1.32
U2AF1-212ENST00000496462 ZNF702PQ9H963 129 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 PRR13Q9NZ81 148 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 G3V318 75 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 IGKV1-5P01602 117 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 NPPCP23582 126 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 RND2P52198 227 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 PJVKQ0ZLH3 352 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 C10orf55Q5SWW7 151 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 TEPPQ6URK8 271 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 PFDN5Q99471 154 aa6.82□□□□□ -1.32
U2AF1-212ENST00000496462 SOX21Q9Y651 276 aaPredicted RBP6.82□□□□□ -1.32
U2AF1-212ENST00000496462 HELTA6NFD8 242 aa6.81□□□□□ -1.32
U2AF1-212ENST00000496462 IGHG4P01861 327 aa6.81□□□□□ -1.32
U2AF1-212ENST00000496462 HNRNPCP07910 306 aaKnown RBP eCLIP6.81□□□□□ -1.32
U2AF1-212ENST00000496462 RD3LP0DJH9 198 aa6.81□□□□□ -1.32
U2AF1-212ENST00000496462 GPR183P32249 361 aa6.81□□□□□ -1.32
U2AF1-212ENST00000496462 CDX1P47902 265 aaPredicted RBP6.81□□□□□ -1.32
U2AF1-212ENST00000496462 LINC00205P59089 165 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms