RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 Q8N1Y9 231 aa13.28□□□□□ -0.28
RHBDD3-207ENST00000496342 GALNT14Q96FL9 552 aa13.28□□□□□ -0.28
RHBDD3-207ENST00000496342 PDCD10Q9BUL8 212 aa13.28□□□□□ -0.28
RHBDD3-207ENST00000496342 TMEM56-RWDD3S4R434 201 aa13.28□□□□□ -0.28
RHBDD3-207ENST00000496342 A8MWP6 167 aa13.27□□□□□ -0.29
RHBDD3-207ENST00000496342 RNASE2P10153 161 aaKnown RBP13.27□□□□□ -0.29
RHBDD3-207ENST00000496342 DCTN2Q13561 401 aaKnown RBP13.27□□□□□ -0.29
RHBDD3-207ENST00000496342 DEFB114Q30KQ6 69 aa13.27□□□□□ -0.29
RHBDD3-207ENST00000496342 FAM106AQ4KMX7 169 aa13.27□□□□□ -0.29
RHBDD3-207ENST00000496342 WDR89Q96FK6 387 aaPredicted RBP13.27□□□□□ -0.29
RHBDD3-207ENST00000496342 SCGB3A2Q96PL1 93 aa13.27□□□□□ -0.29
RHBDD3-207ENST00000496342 MLXQ9UH92 298 aa13.27□□□□□ -0.29
RHBDD3-207ENST00000496342 ZNF207O43670 478 aaKnown RBP13.26□□□□□ -0.29
RHBDD3-207ENST00000496342 FRMD6-AS1P0C7T7 363 aa13.26□□□□□ -0.29
RHBDD3-207ENST00000496342 CBLN1P23435 193 aa13.26□□□□□ -0.29
RHBDD3-207ENST00000496342 TRIQKQ629K1 86 aa13.26□□□□□ -0.29
RHBDD3-207ENST00000496342 LCN12Q6JVE5 192 aa13.26□□□□□ -0.29
RHBDD3-207ENST00000496342 LYZL2Q7Z4W2 148 aa13.26□□□□□ -0.29
RHBDD3-207ENST00000496342 FAM219AQ8IW50 185 aa13.26□□□□□ -0.29
RHBDD3-207ENST00000496342 UXS1Q8NBZ7 420 aa13.26□□□□□ -0.29
RHBDD3-207ENST00000496342 OR1L6Q8NGR2 347 aa13.26□□□□□ -0.29
RHBDD3-207ENST00000496342 TMEM190Q8WZ59 177 aa13.26□□□□□ -0.29
RHBDD3-207ENST00000496342 BSCL2Q96G97 398 aaPredicted RBP13.26□□□□□ -0.29
RHBDD3-207ENST00000496342 ZNF436Q9C0F3 470 aaPredicted RBP13.26□□□□□ -0.29
RHBDD3-207ENST00000496342 BTNL8Q6UX41 500 aa13.25□□□□□ -0.29
RHBDD3-207ENST00000496342 WFDC10AQ9H1F0 79 aa13.25□□□□□ -0.29
RHBDD3-207ENST00000496342 ENY2Q9NPA8 101 aa13.25□□□□□ -0.29
RHBDD3-207ENST00000496342 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.25□□□□□ -0.29
RHBDD3-207ENST00000496342 NDUFA13Q9P0J0 144 aa13.25□□□□□ -0.29
RHBDD3-207ENST00000496342 MRPL36Q9P0J6 103 aaKnown RBP13.25□□□□□ -0.29
RHBDD3-207ENST00000496342 KCNIP3Q9Y2W7 256 aa13.25□□□□□ -0.29
RHBDD3-207ENST00000496342 ZNF785A8K8V0 405 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 INS-IGF2F8WCM5 200 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 CTSGP08311 255 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 IGHV4-30-4P0DP06 118 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 VAMP1P23763 118 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 SNCAP37840 140 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 INPP1P49441 399 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 SPCS3P61009 180 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 PPP1R1AQ13522 171 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 MLANAQ16655 118 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 ANKRD55Q3KP44 614 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 AARDQ4LEZ3 155 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 NMSQ5H8A3 153 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 SBSPONQ8IVN8 264 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 TMEM61Q8N0U2 210 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 IL22RA2Q969J5 263 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 C20orf24Q9BUV8 137 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 FNDC4Q9H6D8 234 aaPredicted RBP13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 FLVCR2Q9UPI3 526 aa13.24□□□□□ -0.29
RHBDD3-207ENST00000496342 CEBPZOSA8MTT3 80 aa13.23□□□□□ -0.29
RHBDD3-207ENST00000496342 CD7P09564 240 aa13.23□□□□□ -0.29
RHBDD3-207ENST00000496342 SULT1A3P0DMM9 295 aa13.23□□□□□ -0.29
RHBDD3-207ENST00000496342 SULT1A4P0DMN0 295 aa13.23□□□□□ -0.29
RHBDD3-207ENST00000496342 IL7P13232 177 aa13.23□□□□□ -0.29
RHBDD3-207ENST00000496342 BTCP35070 178 aa13.23□□□□□ -0.29
RHBDD3-207ENST00000496342 MFAP4P55083 255 aa13.23□□□□□ -0.29
RHBDD3-207ENST00000496342 GUCA2BQ16661 112 aa13.23□□□□□ -0.29
RHBDD3-207ENST00000496342 LGI3Q8N145 548 aa13.23□□□□□ -0.29
RHBDD3-207ENST00000496342 A0A0B4J2A0 478 aa13.22□□□□□ -0.29
RHBDD3-207ENST00000496342 SCAF4O95104 1147 aaKnown RBP13.22□□□□□ -0.29
RHBDD3-207ENST00000496342 CD81P60033 236 aa13.22□□□□□ -0.29
RHBDD3-207ENST00000496342 BSXQ3C1V8 233 aa13.22□□□□□ -0.29
RHBDD3-207ENST00000496342 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
RHBDD3-207ENST00000496342 SPSB3Q6PJ21 355 aa13.22□□□□□ -0.29
RHBDD3-207ENST00000496342 CENPSQ8N2Z9 138 aa13.22□□□□□ -0.29
RHBDD3-207ENST00000496342 OR2K2Q8NGT1 345 aa13.22□□□□□ -0.29
RHBDD3-207ENST00000496342 OR52E5Q8NH55 327 aa13.22□□□□□ -0.29
RHBDD3-207ENST00000496342 TMEM170AQ8WVE7 144 aa13.22□□□□□ -0.29
RHBDD3-207ENST00000496342 SHPKQ9UHJ6 478 aa13.22□□□□□ -0.29
RHBDD3-207ENST00000496342 IGHV3-49A0A0A0MS15 119 aa13.21□□□□□ -0.29
RHBDD3-207ENST00000496342 NDUFA4O00483 81 aa13.21□□□□□ -0.29
RHBDD3-207ENST00000496342 GNG7O60262 68 aa13.21□□□□□ -0.29
RHBDD3-207ENST00000496342 C8orf88P0DMB2 117 aa13.21□□□□□ -0.29
RHBDD3-207ENST00000496342 ANXA3P12429 323 aa13.21□□□□□ -0.29
RHBDD3-207ENST00000496342 RBMS2Q15434 407 aaKnown RBP13.21□□□□□ -0.29
RHBDD3-207ENST00000496342 TMEM128Q5BJH2 165 aa13.21□□□□□ -0.29
RHBDD3-207ENST00000496342 SLC25A21Q9BQT8 299 aaPredicted RBP13.21□□□□□ -0.29
RHBDD3-207ENST00000496342 PALMDQ9NP74 551 aa13.21□□□□□ -0.29
RHBDD3-207ENST00000496342 HEYLQ9NQ87 328 aaPredicted RBP13.21□□□□□ -0.29
RHBDD3-207ENST00000496342 TECRQ9NZ01 308 aaKnown RBP13.21□□□□□ -0.29
RHBDD3-207ENST00000496342 UFC1Q9Y3C8 167 aa13.21□□□□□ -0.29
RHBDD3-207ENST00000496342 NUPL2O15504 423 aaKnown RBP13.2□□□□□ -0.3
RHBDD3-207ENST00000496342 SFT2D2O95562 160 aa13.2□□□□□ -0.3
RHBDD3-207ENST00000496342 OPRK1P41145 380 aa13.2□□□□□ -0.3
RHBDD3-207ENST00000496342 SMCO1Q147U7 214 aa13.2□□□□□ -0.3
RHBDD3-207ENST00000496342 GTSCR1Q86UQ5 136 aa13.2□□□□□ -0.3
RHBDD3-207ENST00000496342 DEDD2Q8WXF8 326 aa13.2□□□□□ -0.3
RHBDD3-207ENST00000496342 ATP6V0BQ99437 205 aa13.2□□□□□ -0.3
RHBDD3-207ENST00000496342 NEURL2Q9BR09 285 aa13.2□□□□□ -0.3
RHBDD3-207ENST00000496342 RBKSQ9H477 322 aa13.2□□□□□ -0.3
RHBDD3-207ENST00000496342 C19orf73Q9NVV2 129 aa13.2□□□□□ -0.3
RHBDD3-207ENST00000496342 YIF1AO95070 293 aa13.19□□□□□ -0.3
RHBDD3-207ENST00000496342 NDUFB6O95139 128 aa13.19□□□□□ -0.3
RHBDD3-207ENST00000496342 FCGR2BP31994 310 aaPredicted RBP13.19□□□□□ -0.3
RHBDD3-207ENST00000496342 SUB1P53999 127 aaKnown RBP eCLIP13.19□□□□□ -0.3
RHBDD3-207ENST00000496342 ELLP55199 621 aaPredicted RBP13.19□□□□□ -0.3
RHBDD3-207ENST00000496342 SRPXP78539 464 aa13.19□□□□□ -0.3
RHBDD3-207ENST00000496342 CNPY1Q3B7I2 92 aa13.19□□□□□ -0.3
RHBDD3-207ENST00000496342 SLC24A4Q8NFF2 622 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms