RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 ACTR3CQ9C0K3 210 aaPredicted RBP10.9□□□□□ -0.66
SPTBN1-205ENST00000496323 GNG13Q9P2W3 67 aa10.9□□□□□ -0.66
SPTBN1-205ENST00000496323 FAM208BQ5VWN6 2430 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 SPG11Q96JI7 2443 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 CENPVL3A0A0U1RRI6 287 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 SEC14L6B5MCN3 397 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 SUB1P53999 127 aaKnown RBP eCLIP10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 PRR20EP86478 221 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 PRR20CP86479 221 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 PRR20DP86480 221 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 PRR20BP86481 221 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 PRR20AP86496 221 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 SLC35B3Q9H1N7 401 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 SMDT1Q9H4I9 107 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 LOC102723971A0A1B0GUV8 181 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 SOX15O60248 233 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 LINC00869P0C866 280 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 RPL29P47914 159 aaKnown RBP10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 B2MP61769 119 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 BTN1A1Q13410 526 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 RXFP4Q8TDU9 374 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 TMPRSS5Q9H3S3 457 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 MRPL36Q9P0J6 103 aaKnown RBP10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 SLC45A2Q9UMX9 530 aa10.89□□□□□ -0.67
SPTBN1-205ENST00000496323 NPFFO15130 113 aa10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 CYB5BO43169 146 aa10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 IGHV3-48P01763 117 aa10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 FBP1P09467 338 aa10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 C5orf64Q2M2E5 130 aa10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 FAM120AOSQ5T036 256 aa10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 RUSC1-AS1Q66K80 236 aa10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 DMRT1Q9Y5R6 373 aa10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 KMT2BQ9UMN6 2715 aaPredicted RBP10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 ZFP92A6NM28 416 aa10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 SRP19P09132 144 aaKnown RBP10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 BCL2P10415 239 aa10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 CDC34P49427 236 aaPredicted RBP10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 RAB31Q13636 194 aa10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 PMS2P11Q13670 270 aa10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 NKX6-2Q9C056 277 aaPredicted RBP10.88□□□□□ -0.67
SPTBN1-205ENST00000496323 CHD6Q8TD26 2715 aa10.87□□□□□ -0.67
SPTBN1-205ENST00000496323 HSPB1P04792 205 aaKnown RBP10.87□□□□□ -0.67
SPTBN1-205ENST00000496323 OR10J1P30954 320 aa10.87□□□□□ -0.67
SPTBN1-205ENST00000496323 NPBWR1P48145 328 aa10.87□□□□□ -0.67
SPTBN1-205ENST00000496323 DSCR9P59020 149 aa10.87□□□□□ -0.67
SPTBN1-205ENST00000496323 CLEC12BQ2HXU8 276 aa10.87□□□□□ -0.67
SPTBN1-205ENST00000496323 KHDC3LQ587J8 217 aa10.87□□□□□ -0.67
SPTBN1-205ENST00000496323 MRPL41Q8IXM3 137 aaKnown RBP10.87□□□□□ -0.67
SPTBN1-205ENST00000496323 OR1P1Q8NH06 330 aa10.87□□□□□ -0.67
SPTBN1-205ENST00000496323 ACY3Q96HD9 319 aa10.87□□□□□ -0.67
SPTBN1-205ENST00000496323 KCNIP2Q9NS61 270 aa10.87□□□□□ -0.67
SPTBN1-205ENST00000496323 CNIH1O95406 144 aa10.86□□□□□ -0.67
SPTBN1-205ENST00000496323 GATA2P23769 480 aaPredicted RBP10.86□□□□□ -0.67
SPTBN1-205ENST00000496323 SLC35E1Q96K37 410 aa10.86□□□□□ -0.67
SPTBN1-205ENST00000496323 F11RQ9Y624 299 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-205ENST00000496323 CSMD1Q96PZ7 3565 aa10.86□□□□□ -0.67
SPTBN1-205ENST00000496323 IGHV3OR16-10A0A075B7F0 116 aa10.86□□□□□ -0.67
SPTBN1-205ENST00000496323 CRYGCP07315 174 aa10.86□□□□□ -0.67
SPTBN1-205ENST00000496323 FXYD3Q14802 87 aa10.86□□□□□ -0.67
SPTBN1-205ENST00000496323 GATAD1Q8WUU5 269 aa10.86□□□□□ -0.67
SPTBN1-205ENST00000496323 NPIPB3Q92617 1050 aa10.86□□□□□ -0.67
SPTBN1-205ENST00000496323 SEPSECSQ9HD40 501 aaKnown RBP10.86□□□□□ -0.67
SPTBN1-205ENST00000496323 IGKV1D-37A0A075B6S9 117 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 A0A096LNT2 108 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 NCBP2LA6PVI3 153 aaKnown RBP10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 MSMBP08118 114 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 TMEM11P17152 192 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 CYB561D1Q8N8Q1 229 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 ABHD5Q8WTS1 349 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 MISP3Q96FF7 219 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 SRSF8Q9BRL6 282 aaKnown RBP10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 FAM103A1Q9BTL3 118 aaKnown RBP10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 ABCA2Q9BZC7 2435 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 A0A1W2PPV4 95 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 FAM74A7A6NL05 159 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 DNASE2O00115 360 aaPredicted RBP10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 SNAPINO95295 136 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 FAM106CPP0CH98 169 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 NDPQ00604 133 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 TMEM249Q2WGJ8 235 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 FAM74A3Q4VXF1 159 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 SOHLH1Q5JUK2 328 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 SPATA31B1PQ5VZV4 182 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 SLC25A33Q9BSK2 321 aa10.85□□□□□ -0.67
SPTBN1-205ENST00000496323 IGHV1-69DA0A0B4J2H0 117 aa10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 IGHV1-69P01742 117 aa10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 CX3CL1P78423 397 aa10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 ZNF562Q6V9R5 426 aa10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 CLRN3Q8NCR9 226 aa10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 VAX2Q9UIW0 290 aa10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 PLXNB1O43157 2135 aa10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 IGHV3-21A0A0B4J1V1 117 aa10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 NUPL2O15504 423 aaKnown RBP10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 STAG3L2P0CL84 134 aa10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 STAG3L3P0CL85 134 aa10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 PLA2G2AP14555 144 aa10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 SLC25A16P16260 332 aa10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 CTRB1P17538 263 aa10.84□□□□□ -0.67
SPTBN1-205ENST00000496323 RND2P52198 227 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms