RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 H3BUA1 57 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 HAX1O00165 279 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 IFNA4P05014 189 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 METTL15P1P0C7V9 234 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 PROK1P58294 105 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 RAB11AP62491 216 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 KRTAP24-1Q3LI83 254 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 ZNF546Q86UE3 836 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 OR5AU1Q8NGC0 362 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 FXYD6-FXYD2A0A087WZ82 144 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 PMS2P5A8MQ11 134 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 PF4V1P10720 104 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 RAB9AP51151 201 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 ETV3LQ6ZN32 361 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 MISP3Q96FF7 219 aa17■□□□□ 0.31
ECHDC3-205ENST00000496136 A0A1B0GUS0 222 aa16.99■□□□□ 0.31
ECHDC3-205ENST00000496136 IGSF23A1L1A6 192 aa16.99■□□□□ 0.31
ECHDC3-205ENST00000496136 TMEM89A2RUT3 159 aa16.99■□□□□ 0.31
ECHDC3-205ENST00000496136 CYB5BO43169 146 aa16.99■□□□□ 0.31
ECHDC3-205ENST00000496136 OR2J3O76001 311 aa16.99■□□□□ 0.31
ECHDC3-205ENST00000496136 OR8U8P0C7N1 319 aa16.99■□□□□ 0.31
ECHDC3-205ENST00000496136 HIST1H1BP16401 226 aaKnown RBP16.99■□□□□ 0.31
ECHDC3-205ENST00000496136 FOXL1Q12952 345 aa16.99■□□□□ 0.31
ECHDC3-205ENST00000496136 TMEM65Q6PI78 240 aa16.99■□□□□ 0.31
ECHDC3-205ENST00000496136 LCNL1Q6ZST4 164 aa16.99■□□□□ 0.31
ECHDC3-205ENST00000496136 TRGV3P03979 118 aa16.98■□□□□ 0.31
ECHDC3-205ENST00000496136 ELANEP08246 267 aa16.98■□□□□ 0.31
ECHDC3-205ENST00000496136 RPL12P30050 165 aaKnown RBP16.98■□□□□ 0.31
ECHDC3-205ENST00000496136 FOXE3Q13461 319 aa16.98■□□□□ 0.31
ECHDC3-205ENST00000496136 MLANAQ16655 118 aa16.98■□□□□ 0.31
ECHDC3-205ENST00000496136 RNASEH2CQ8TDP1 164 aaKnown RBP16.98■□□□□ 0.31
ECHDC3-205ENST00000496136 SLA2Q9H6Q3 261 aa16.98■□□□□ 0.31
ECHDC3-205ENST00000496136 THYN1Q9P016 225 aa16.98■□□□□ 0.31
ECHDC3-205ENST00000496136 FBXL7Q9UJT9 491 aa16.98■□□□□ 0.31
ECHDC3-205ENST00000496136 CST7O76096 145 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 NDUFB8O95169 186 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 C1QBP02746 253 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 RHOGP84095 191 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 DEFA5Q01523 94 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 NHLH2Q02577 135 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 OR8G2PQ6IF36 304 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 COMMD1Q8N668 190 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 NECAP1Q8NC96 275 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 PINX1Q96BK5 328 aaKnown RBP16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 SLC25A31Q9H0C2 315 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 TNFSF18Q9UNG2 199 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 PRSS46E5RG02 174 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 CORTO00230 105 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 SULT1A1P50225 295 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 TPPP2P59282 170 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 ARL16Q0P5N6 197 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 HAPLN4Q86UW8 402 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 RNF152Q8N8N0 203 aa16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 FNDC4Q9H6D8 234 aaPredicted RBP16.97■□□□□ 0.31
ECHDC3-205ENST00000496136 I3L2K1 104 aa16.96■□□□□ 0.31
ECHDC3-205ENST00000496136 K7EIM0 57 aa16.96■□□□□ 0.31
ECHDC3-205ENST00000496136 EWSR1Q01844 656 aaKnown RBP eCLIP16.96■□□□□ 0.31
ECHDC3-205ENST00000496136 TCTEX1D4Q5JR98 221 aa16.96■□□□□ 0.31
ECHDC3-205ENST00000496136 OR10P1Q8NGE3 313 aa16.96■□□□□ 0.31
ECHDC3-205ENST00000496136 FBN1P35555 2871 aaKnown RBP16.96■□□□□ 0.31
ECHDC3-205ENST00000496136 HMSDA8MTL9 139 aa16.95■□□□□ 0.3
ECHDC3-205ENST00000496136 ARPC5O15511 151 aa16.95■□□□□ 0.3
ECHDC3-205ENST00000496136 MT-CO2P00403 227 aa16.95■□□□□ 0.3
ECHDC3-205ENST00000496136 RPLP1P05386 114 aaKnown RBP16.95■□□□□ 0.3
ECHDC3-205ENST00000496136 OPRK1P41145 380 aa16.95■□□□□ 0.3
ECHDC3-205ENST00000496136 KIAA0141Q14154 515 aaPredicted RBP16.95■□□□□ 0.3
ECHDC3-205ENST00000496136 C15orf32Q32M92 178 aa16.95■□□□□ 0.3
ECHDC3-205ENST00000496136 STX12Q86Y82 276 aa16.95■□□□□ 0.3
ECHDC3-205ENST00000496136 TMEM217Q8N7C4 229 aa16.95■□□□□ 0.3
ECHDC3-205ENST00000496136 INO80EQ8NBZ0 244 aaPredicted RBP16.95■□□□□ 0.3
ECHDC3-205ENST00000496136 AQP10Q96PS8 301 aa16.95■□□□□ 0.3
ECHDC3-205ENST00000496136 IGHV3-21A0A0B4J1V1 117 aa16.94■□□□□ 0.3
ECHDC3-205ENST00000496136 IGHV3-48P01763 117 aa16.94■□□□□ 0.3
ECHDC3-205ENST00000496136 EXOSC2Q13868 293 aaKnown RBP16.94■□□□□ 0.3
ECHDC3-205ENST00000496136 OR4X2Q8NGF9 303 aa16.94■□□□□ 0.3
ECHDC3-205ENST00000496136 SCARB1Q8WTV0 552 aa16.94■□□□□ 0.3
ECHDC3-205ENST00000496136 RNF222A6NCQ9 220 aa16.94■□□□□ 0.3
ECHDC3-205ENST00000496136 FAM223BA6NKX1 122 aa16.94■□□□□ 0.3
ECHDC3-205ENST00000496136 NUP62P37198 522 aaPredicted RBP16.94■□□□□ 0.3
ECHDC3-205ENST00000496136 CD69Q07108 199 aa16.94■□□□□ 0.3
ECHDC3-205ENST00000496136 FAM223AQ8IWN6 122 aa16.94■□□□□ 0.3
ECHDC3-205ENST00000496136 BSCL2Q96G97 398 aaPredicted RBP16.94■□□□□ 0.3
ECHDC3-205ENST00000496136 USMG5Q96IX5 58 aa16.94■□□□□ 0.3
ECHDC3-205ENST00000496136 HYLS1Q96M11 299 aa16.94■□□□□ 0.3
ECHDC3-205ENST00000496136 GPX4P36969 197 aaPredicted RBP16.93■□□□□ 0.3
ECHDC3-205ENST00000496136 BAXQ07812 192 aa16.93■□□□□ 0.3
ECHDC3-205ENST00000496136 ZFP69Q49AA0 526 aa16.93■□□□□ 0.3
ECHDC3-205ENST00000496136 ACOT7LQ6ZUV0 252 aa16.93■□□□□ 0.3
ECHDC3-205ENST00000496136 MYOZ3Q8TDC0 251 aa16.93■□□□□ 0.3
ECHDC3-205ENST00000496136 CACNG8Q8WXS5 425 aa16.93■□□□□ 0.3
ECHDC3-205ENST00000496136 C19orf24Q9BVV8 132 aa16.93■□□□□ 0.3
ECHDC3-205ENST00000496136 ZC4H2Q9NQZ6 224 aa16.93■□□□□ 0.3
ECHDC3-205ENST00000496136 S4R3C0 116 aa16.93■□□□□ 0.3
ECHDC3-205ENST00000496136 MFSD2BA6NFX1 497 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 AP2S1P53680 142 aaPredicted RBP16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 ATP5G2Q06055 141 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 AWAT1Q58HT5 328 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 ZNF491Q8N8L2 437 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 C11orf44Q8N8P7 122 aa16.92■□□□□ 0.3
ECHDC3-205ENST00000496136 MFFQ9GZY8 342 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms