RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 A0A087WUJ7 227 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 hADV38S2A0JD32 116 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 HAND1O96004 215 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 ZNF705BP0CI00 300 aaPredicted RBP2.01□□□□□ -2.09
SSR3-208ENST00000496050 DEFA1P59665 94 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 MRPS15P82914 257 aaKnown RBP2.01□□□□□ -2.09
SSR3-208ENST00000496050 RUNX1Q01196 453 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 NNATQ16517 81 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 MIR17HGQ75NE6 70 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 GDPD1Q8N9F7 314 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 PRAP1Q96NZ9 151 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 YIPF3Q9GZM5 350 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 C20orf27Q9GZN8 174 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 SLC39A9Q9NUM3 307 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 PRELID3BQ9Y3B1 194 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 GLI3P10071 1580 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 NEO1Q92859 1461 aa2.01□□□□□ -2.09
SSR3-208ENST00000496050 RTL1A6NKG5 1358 aa2□□□□□ -2.09
SSR3-208ENST00000496050 ROBO3Q96MS0 1386 aa2□□□□□ -2.09
SSR3-208ENST00000496050 IGKV2-29A2NJV5 120 aaPredicted RBP2□□□□□ -2.09
SSR3-208ENST00000496050 TRAPPC13A5PLN9 417 aa2□□□□□ -2.09
SSR3-208ENST00000496050 IBA57-AS1B1ANH7 110 aa2□□□□□ -2.09
SSR3-208ENST00000496050 PMP2P02689 132 aa2□□□□□ -2.09
SSR3-208ENST00000496050 RPSAP08865 295 aaKnown RBP2□□□□□ -2.09
SSR3-208ENST00000496050 SMIM10L2AP0DMW4 78 aa2□□□□□ -2.09
SSR3-208ENST00000496050 SMIM10L2BP0DMW5 78 aa2□□□□□ -2.09
SSR3-208ENST00000496050 G6PCP35575 357 aa2□□□□□ -2.09
SSR3-208ENST00000496050 KISS1Q15726 138 aa2□□□□□ -2.09
SSR3-208ENST00000496050 OOSP2Q86WS3 158 aa2□□□□□ -2.09
SSR3-208ENST00000496050 BPIFA4PQ86YQ2 179 aa2□□□□□ -2.09
SSR3-208ENST00000496050 CLVS1Q8IUQ0 354 aaPredicted RBP2□□□□□ -2.09
SSR3-208ENST00000496050 WFDC11Q8NEX6 87 aa2□□□□□ -2.09
SSR3-208ENST00000496050 PFN4Q8NHR9 129 aa2□□□□□ -2.09
SSR3-208ENST00000496050 DNAJC9Q8WXX5 260 aa2□□□□□ -2.09
SSR3-208ENST00000496050 ITFG2Q969R8 447 aa2□□□□□ -2.09
SSR3-208ENST00000496050 BTF3L4Q96K17 158 aa2□□□□□ -2.09
SSR3-208ENST00000496050 MRPL32Q9BYC8 188 aaKnown RBP2□□□□□ -2.09
SSR3-208ENST00000496050 RIC1Q4ADV7 1423 aa2□□□□□ -2.09
SSR3-208ENST00000496050 TRBV6-5A0A0K0K1A5 114 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 FUOMA2VDF0 154 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 CLPSP04118 112 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 IFNA6P05013 189 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 ERVS71-1P61550 626 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 ZNF345Q14585 488 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 FP248Q71RG6 208 aaPredicted RBP1.99□□□□□ -2.09
SSR3-208ENST00000496050 DEFB119Q8N690 84 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 OR51A2Q8NGJ7 313 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 TERB2Q8NHR7 220 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 IDI2-AS1Q9NZ38 188 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 FBXO5Q9UKT4 447 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 ERGIC3Q9Y282 383 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 CR1P17927 2039 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 CCDC144AA2RUR9 1427 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 DOCK5Q9H7D0 1870 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 HECW1Q76N89 1606 aa1.99□□□□□ -2.09
SSR3-208ENST00000496050 TTC21AQ8NDW8 1320 aa1.98□□□□□ -2.09
SSR3-208ENST00000496050 PDE6DO43924 150 aa1.98□□□□□ -2.09
SSR3-208ENST00000496050 Q1T7F1 81 aa1.98□□□□□ -2.09
SSR3-208ENST00000496050 C12orf74Q32Q52 190 aa1.98□□□□□ -2.09
SSR3-208ENST00000496050 KRTAP21-3Q3LHN1 58 aa1.98□□□□□ -2.09
SSR3-208ENST00000496050 DEFB128Q7Z7B8 93 aa1.98□□□□□ -2.09
SSR3-208ENST00000496050 Q96M85 177 aa1.98□□□□□ -2.09
SSR3-208ENST00000496050 LHFPL6Q9Y693 200 aa1.98□□□□□ -2.09
SSR3-208ENST00000496050 HTR1AP08908 422 aa1.97□□□□□ -2.09
SSR3-208ENST00000496050 S100A4P26447 101 aaKnown RBP1.97□□□□□ -2.09
SSR3-208ENST00000496050 CDC42P60953 191 aa1.97□□□□□ -2.09
SSR3-208ENST00000496050 LIN52Q52LA3 116 aa1.97□□□□□ -2.09
SSR3-208ENST00000496050 KHDC3LQ587J8 217 aa1.97□□□□□ -2.09
SSR3-208ENST00000496050 HIST3H2BBQ8N257 126 aa1.97□□□□□ -2.09
SSR3-208ENST00000496050 KIFC1Q9BW19 673 aa1.97□□□□□ -2.09
SSR3-208ENST00000496050 C14orf105Q9NVL8 296 aa1.97□□□□□ -2.09
SSR3-208ENST00000496050 ARL2BPQ9Y2Y0 163 aa1.97□□□□□ -2.09
SSR3-208ENST00000496050 TONSLQ96HA7 1378 aa1.97□□□□□ -2.09
SSR3-208ENST00000496050 RTTNQ86VV8 2226 aa1.97□□□□□ -2.09
SSR3-208ENST00000496050 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 hCG_1818297A0A087WSY0 165 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 A8MT66 165 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 BUB1B-PAK6H3BSN5 160 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 UBBP0CG47 229 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 PPIBP23284 216 aaKnown RBP1.96□□□□□ -2.1
SSR3-208ENST00000496050 TMED2Q15363 201 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 LCN15Q6UWW0 184 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 DPPA3Q6W0C5 159 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 TRAPPC6BQ86SZ2 158 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 LINC00471Q8N535 108 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 SIGLECL1Q8N7X8 197 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 C9orf163Q8N9P6 203 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 ZNF439Q8NDP4 499 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 OR52L1Q8NGH7 329 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 OR4D11Q8NGI4 311 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 SIGMAR1Q99720 223 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 NMNAT1Q9HAN9 279 aaPredicted RBP1.96□□□□□ -2.1
SSR3-208ENST00000496050 BRWD1Q9NSI6 2320 aa1.96□□□□□ -2.1
SSR3-208ENST00000496050 STRCQ7RTU9 1775 aa1.95□□□□□ -2.1
SSR3-208ENST00000496050 SETD5Q9C0A6 1442 aa1.95□□□□□ -2.1
SSR3-208ENST00000496050 A0A0D9SG52 128 aa1.95□□□□□ -2.1
SSR3-208ENST00000496050 OR2J2O76002 312 aa1.95□□□□□ -2.1
SSR3-208ENST00000496050 OR5F1O95221 314 aa1.95□□□□□ -2.1
SSR3-208ENST00000496050 ZNF682O95780 498 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms