RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 GPR132Q9UNW8 380 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 MOB4Q9Y3A3 225 aa4.93□□□□□ -1.62
VIM-207ENST00000495528 DNAH1Q9P2D7 4330 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 OOSP1A8MZH6 123 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 CCL24O00175 119 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 ITGB1BP1O14713 200 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 RAB29O14966 203 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 ARPC1BO15143 372 aaKnown RBP4.92□□□□□ -1.62
VIM-207ENST00000495528 TNFSF12O43508 249 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 PGLYRP1O75594 196 aaPredicted RBP4.92□□□□□ -1.62
VIM-207ENST00000495528 NDUFB6O95139 128 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 AKR1C4P17516 323 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 SLC6A1P30531 599 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 CEACAM3P40198 252 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 REG1BP48304 166 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 RAB7AP51149 207 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 DIAPH2-AS1Q14236 149 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 RGS21Q2M5E4 152 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 DEFB136Q30KP8 78 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 RPL39P5Q59GN2 51 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 ZNF818PQ6ZRF7 136 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 NOTCH2NLQ7Z3S9 236 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 TMED4Q7Z7H5 227 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 MOB3BQ86TA1 216 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 LINC00311Q8N616 119 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 DRAM1Q8N682 238 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 C5orf56Q8N8D9 126 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 DRAXINQ8NBI3 349 aaPredicted RBP4.92□□□□□ -1.62
VIM-207ENST00000495528 MUC7Q8TAX7 377 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 CHPT1Q8WUD6 406 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 RBMXL1Q96E39 390 aaKnown RBP4.92□□□□□ -1.62
VIM-207ENST00000495528 S1PR3Q99500 378 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 SLC25A21Q9BQT8 299 aaPredicted RBP4.92□□□□□ -1.62
VIM-207ENST00000495528 AGMATQ9BSE5 352 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 FXYD6Q9H0Q3 95 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 OR2D2Q9H210 308 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 SDHAF2Q9NX18 166 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 SLC2A8Q9NY64 477 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 PIPOXQ9P0Z9 390 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 C14orf166Q9Y224 244 aaKnown RBP4.92□□□□□ -1.62
VIM-207ENST00000495528 VSIG4Q9Y279 399 aa4.92□□□□□ -1.62
VIM-207ENST00000495528 A0A1W2PPQ1 181 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 INMT-MINDY4F8WBC2 141 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 M0R1X1 148 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 GPR31O00270 319 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 SLC22A5O76082 557 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 IGKV1D-33P01593 117 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 IGKV1-33P01594 117 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 IGHG2P01859 326 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 GAPDHP04406 335 aaKnown RBP4.91□□□□□ -1.62
VIM-207ENST00000495528 CTSDP07339 412 aaPredicted RBP4.91□□□□□ -1.62
VIM-207ENST00000495528 IL3RAP26951 378 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 PIGPP57054 158 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 SLC35B1P78383 322 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 HES1Q14469 280 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 TMEM187Q14656 261 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 TRIM16LQ309B1 348 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 SP6Q3SY56 376 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 Q3ZCU0 254 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 C9orf66Q5T8R8 295 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 PLET1Q6UQ28 207 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 GSG1LQ6UXU4 331 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 SLC35E3Q7Z769 313 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 SBSPONQ8IVN8 264 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 CMTM1Q8IZ96 169 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 SLC38A6Q8IZM9 456 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 CENPSQ8N2Z9 138 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 STPG2Q8N412 459 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 COMMD1Q8N668 190 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 ZNF645Q8N7E2 425 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 C8orf31Q8N9H6 132 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 ST6GALNAC6Q969X2 333 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 RPEQ96AT9 228 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 C5orf30Q96GV9 206 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 ZNF251Q9BRH9 671 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 IFI27L2Q9H2X8 130 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 C5orf66Q9H5L9 145 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 NUDT15Q9NV35 164 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 COPZ2Q9P299 210 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 KCNIP3Q9Y2W7 256 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 AMMECR1Q9Y4X0 333 aaPredicted RBP4.91□□□□□ -1.62
VIM-207ENST00000495528 NUBP2Q9Y5Y2 271 aa4.91□□□□□ -1.62
VIM-207ENST00000495528 IGHV4-4A0A075B6R2 117 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 IGHV3-72A0A0B4J1Y9 119 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 SEC14L6B5MCN3 397 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 FGF16O43320 207 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 PTTG1O95997 202 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 DHFRP00374 187 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 SAA2P0DJI9 122 aaPredicted RBP4.9□□□□□ -1.63
VIM-207ENST00000495528 CT45A6P0DMU7 189 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 CT45A5P0DMU8 189 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 CT45A7P0DMV0 189 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 S100GP29377 79 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 LPAR6P43657 344 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 CDX1P47902 265 aaPredicted RBP4.9□□□□□ -1.63
VIM-207ENST00000495528 RPL30P62888 115 aaKnown RBP4.9□□□□□ -1.63
VIM-207ENST00000495528 SURF2Q15527 256 aaPredicted RBP4.9□□□□□ -1.63
VIM-207ENST00000495528 ZFP69Q49AA0 526 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 OR2B11Q5JQS5 317 aa4.9□□□□□ -1.63
VIM-207ENST00000495528 PRR27Q6MZM9 219 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms