RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 U3KQ87 197 aa13.23□□□□□ -0.29
HDAC6-235ENST00000495515 ANKRD34BA5PLL1 514 aa13.22□□□□□ -0.29
HDAC6-235ENST00000495515 MPTX1A8MV57 137 aa13.22□□□□□ -0.29
HDAC6-235ENST00000495515 SYNGR2O43760 224 aa13.22□□□□□ -0.29
HDAC6-235ENST00000495515 SSNA1O43805 119 aa13.22□□□□□ -0.29
HDAC6-235ENST00000495515 IFNA10P01566 189 aa13.22□□□□□ -0.29
HDAC6-235ENST00000495515 RNASE2P10153 161 aaKnown RBP13.22□□□□□ -0.29
HDAC6-235ENST00000495515 ZP3P21754 424 aa13.22□□□□□ -0.29
HDAC6-235ENST00000495515 MFAP2P55001 183 aa13.22□□□□□ -0.29
HDAC6-235ENST00000495515 RPP30P78346 268 aaKnown RBP13.22□□□□□ -0.29
HDAC6-235ENST00000495515 TATDN3Q17R31 274 aa13.22□□□□□ -0.29
HDAC6-235ENST00000495515 ZBTB8BQ8NAP8 495 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-235ENST00000495515 OR4D5Q8NGN0 318 aa13.22□□□□□ -0.29
HDAC6-235ENST00000495515 OR10C1Q96KK4 312 aa13.22□□□□□ -0.29
HDAC6-235ENST00000495515 DMRT1Q9Y5R6 373 aa13.22□□□□□ -0.29
HDAC6-235ENST00000495515 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.21□□□□□ -0.29
HDAC6-235ENST00000495515 CCSO14618 274 aa13.21□□□□□ -0.29
HDAC6-235ENST00000495515 NPY1RP25929 384 aa13.21□□□□□ -0.29
HDAC6-235ENST00000495515 ID3Q02535 119 aa13.21□□□□□ -0.29
HDAC6-235ENST00000495515 FHL3Q13643 280 aa13.21□□□□□ -0.29
HDAC6-235ENST00000495515 BSXQ3C1V8 233 aa13.21□□□□□ -0.29
HDAC6-235ENST00000495515 C2orf83Q53S99 150 aa13.21□□□□□ -0.29
HDAC6-235ENST00000495515 ETV3LQ6ZN32 361 aa13.21□□□□□ -0.29
HDAC6-235ENST00000495515 C2orf50Q96LR7 162 aa13.21□□□□□ -0.29
HDAC6-235ENST00000495515 DUX3Q96PT4 197 aa13.21□□□□□ -0.29
HDAC6-235ENST00000495515 ATP6V0BQ99437 205 aa13.21□□□□□ -0.29
HDAC6-235ENST00000495515 GAR1Q9NY12 217 aaKnown RBP13.21□□□□□ -0.29
HDAC6-235ENST00000495515 IGHV4OR15-8A0A075B7B6 117 aa13.2□□□□□ -0.3
HDAC6-235ENST00000495515 A0A087WW49 117 aa13.2□□□□□ -0.3
HDAC6-235ENST00000495515 C7orf66A4D0T2 115 aa13.2□□□□□ -0.3
HDAC6-235ENST00000495515 SCGB1D2O95969 90 aa13.2□□□□□ -0.3
HDAC6-235ENST00000495515 CD33P20138 364 aa13.2□□□□□ -0.3
HDAC6-235ENST00000495515 PVRIGQ6DKI7 326 aa13.2□□□□□ -0.3
HDAC6-235ENST00000495515 LINC00482Q8N8I6 264 aa13.2□□□□□ -0.3
HDAC6-235ENST00000495515 RNASEH2CQ8TDP1 164 aaKnown RBP13.2□□□□□ -0.3
HDAC6-235ENST00000495515 SCARB1Q8WTV0 552 aa13.2□□□□□ -0.3
HDAC6-235ENST00000495515 PINX1Q96BK5 328 aaKnown RBP13.2□□□□□ -0.3
HDAC6-235ENST00000495515 MAGT1Q9H0U3 335 aa13.2□□□□□ -0.3
HDAC6-235ENST00000495515 C21orf62Q9NYP8 219 aa13.2□□□□□ -0.3
HDAC6-235ENST00000495515 RPS10-NUDT3A0A1W2PQS6 291 aa13.19□□□□□ -0.3
HDAC6-235ENST00000495515 MFSD2BA6NFX1 497 aa13.19□□□□□ -0.3
HDAC6-235ENST00000495515 K7EIM0 57 aa13.19□□□□□ -0.3
HDAC6-235ENST00000495515 MT-CO2P00403 227 aa13.19□□□□□ -0.3
HDAC6-235ENST00000495515 IAPPP10997 89 aa13.19□□□□□ -0.3
HDAC6-235ENST00000495515 OXA1LQ15070 435 aa13.19□□□□□ -0.3
HDAC6-235ENST00000495515 CLEC19AQ6UXS0 136 aa13.19□□□□□ -0.3
HDAC6-235ENST00000495515 WFDC9Q8NEX5 89 aa13.19□□□□□ -0.3
HDAC6-235ENST00000495515 ZNF502Q8TBZ5 544 aa13.19□□□□□ -0.3
HDAC6-235ENST00000495515 I3L2K1 104 aa13.18□□□□□ -0.3
HDAC6-235ENST00000495515 GOSR2O14653 212 aa13.18□□□□□ -0.3
HDAC6-235ENST00000495515 IGHV3-23P01764 117 aa13.18□□□□□ -0.3
HDAC6-235ENST00000495515 ARL3P36405 182 aa13.18□□□□□ -0.3
HDAC6-235ENST00000495515 OPRK1P41145 380 aa13.18□□□□□ -0.3
HDAC6-235ENST00000495515 MFAP4P55083 255 aa13.18□□□□□ -0.3
HDAC6-235ENST00000495515 POLR2GP62487 172 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC6-235ENST00000495515 RAB11AP62491 216 aa13.18□□□□□ -0.3
HDAC6-235ENST00000495515 RPEL1Q2QD12 228 aa13.18□□□□□ -0.3
HDAC6-235ENST00000495515 ETFRF1Q6IPR1 90 aa13.18□□□□□ -0.3
HDAC6-235ENST00000495515 CCDC140Q96MF4 163 aa13.18□□□□□ -0.3
HDAC6-235ENST00000495515 RAB40CQ96S21 281 aa13.18□□□□□ -0.3
HDAC6-235ENST00000495515 TXN2Q99757 166 aa13.18□□□□□ -0.3
HDAC6-235ENST00000495515 MCRIP2Q9BUT9 160 aaKnown RBP13.18□□□□□ -0.3
HDAC6-235ENST00000495515 S4R3C0 116 aa13.18□□□□□ -0.3
HDAC6-235ENST00000495515 IGHV3-21A0A0B4J1V1 117 aa13.17□□□□□ -0.3
HDAC6-235ENST00000495515 GGCTO75223 188 aaKnown RBP13.17□□□□□ -0.3
HDAC6-235ENST00000495515 IFNA4P05014 189 aa13.17□□□□□ -0.3
HDAC6-235ENST00000495515 CLEC3BP05452 202 aa13.17□□□□□ -0.3
HDAC6-235ENST00000495515 HOXD3P31249 432 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-235ENST00000495515 NPBWR1P48145 328 aa13.17□□□□□ -0.3
HDAC6-235ENST00000495515 CYCSP99999 105 aaKnown RBP13.17□□□□□ -0.3
HDAC6-235ENST00000495515 Q56UQ5 140 aa13.17□□□□□ -0.3
HDAC6-235ENST00000495515 ALG5Q9Y673 324 aa13.17□□□□□ -0.3
HDAC6-235ENST00000495515 SSSCA1O60232 199 aa13.16□□□□□ -0.3
HDAC6-235ENST00000495515 SCGB2A1O75556 95 aa13.16□□□□□ -0.3
HDAC6-235ENST00000495515 TRBV12-3P01733 135 aa13.16□□□□□ -0.3
HDAC6-235ENST00000495515 FCGR2BP31994 310 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-235ENST00000495515 GPR183P32249 361 aa13.16□□□□□ -0.3
HDAC6-235ENST00000495515 SLURP1P55000 103 aa13.16□□□□□ -0.3
HDAC6-235ENST00000495515 ACSM6Q6P461 480 aa13.16□□□□□ -0.3
HDAC6-235ENST00000495515 SPSB3Q6PJ21 355 aa13.16□□□□□ -0.3
HDAC6-235ENST00000495515 UBAC2Q8NBM4 344 aa13.16□□□□□ -0.3
HDAC6-235ENST00000495515 BSCL2Q96G97 398 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-235ENST00000495515 RCC1LQ96I51 464 aaKnown RBP13.16□□□□□ -0.3
HDAC6-235ENST00000495515 GPR61Q9BZJ8 451 aa13.16□□□□□ -0.3
HDAC6-235ENST00000495515 PSENENQ9NZ42 101 aa13.16□□□□□ -0.3
HDAC6-235ENST00000495515 PAIP2BQ9ULR5 123 aaKnown RBP13.16□□□□□ -0.3
HDAC6-235ENST00000495515 STRAPQ9Y3F4 350 aaKnown RBP13.16□□□□□ -0.3
HDAC6-235ENST00000495515 NBEAL1Q6ZS30 2694 aa13.16□□□□□ -0.3
HDAC6-235ENST00000495515 PPP5D1E7EU14 171 aa13.15□□□□□ -0.3
HDAC6-235ENST00000495515 L7N2F9 121 aa13.15□□□□□ -0.3
HDAC6-235ENST00000495515 BMPR1BO00238 502 aa13.15□□□□□ -0.3
HDAC6-235ENST00000495515 OVOL1O14753 267 aa13.15□□□□□ -0.3
HDAC6-235ENST00000495515 TGOLN2O43493 480 aa13.15□□□□□ -0.3
HDAC6-235ENST00000495515 MBPP02686 304 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-235ENST00000495515 SLC25A4P12235 298 aa13.15□□□□□ -0.3
HDAC6-235ENST00000495515 PVALBP20472 110 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-235ENST00000495515 TAS2R30P59541 319 aa13.15□□□□□ -0.3
HDAC6-235ENST00000495515 VAMP2P63027 116 aa13.15□□□□□ -0.3
HDAC6-235ENST00000495515 SPANXN5Q5MJ07 72 aa13.15□□□□□ -0.3
HDAC6-235ENST00000495515 DCUN1D4Q92564 292 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms