RNA–Protein interactions for RNA: ENST00000495090.6

SYNE1-230, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 1,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-230ENST00000495090 TET2Q6N021 2002 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-230ENST00000495090 SYS1-DBNDD2H3BUS1 97 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 K7ERU9 68 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 K7ESF4 209 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 CIDEAO60543 219 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 CA1P00915 261 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-230ENST00000495090 CELA3BP08861 270 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 MAGEA5P43359 124 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 PRCDQ00LT1 54 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 C2orf83Q53S99 150 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 RPL39P5Q59GN2 51 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 ETFRF1Q6IPR1 90 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 SPATA12Q7Z6I5 190 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 TPRX1Q8N7U7 411 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 NUDT10Q8NFP7 164 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 PPP1R35Q8TAP8 253 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 NUDT11Q96G61 164 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 URB1-AS1Q96HZ7 61 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 FAM167A-AS1Q96KT0 104 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 ZNF714Q96N38 554 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 C7orf69Q9H7B7 122 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 RAB9BQ9NP90 201 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 ZNF355PQ9NSJ1 428 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 IDI2-AS1Q9NZ38 188 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 SPTBN5Q9NRC6 3674 aaKnown RBP7.91□□□□□ -1.14
SYNE1-230ENST00000495090 IGKV1OR2-108A0A075B7D4 117 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 PSMB11A5LHX3 300 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 HSBP1L1C9JCN9 74 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 M0QZ24 198 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 MGST3O14880 152 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 CA7P43166 264 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 DUSP3P51452 185 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-230ENST00000495090 CT83Q5H943 113 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 TMEM251Q8N6I4 163 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 CD177Q8N6Q3 437 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 OR1L8Q8NGR8 309 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 CSTL1Q9H114 145 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 C12orf49Q9H741 205 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 SCRT2Q9NQ03 307 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 WASHC3Q9Y3C0 194 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 AMMECR1Q9Y4X0 333 aaPredicted RBP7.91□□□□□ -1.14
SYNE1-230ENST00000495090 OR51B2Q9Y5P1 312 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 SPEGQ15772 3267 aa7.91□□□□□ -1.14
SYNE1-230ENST00000495090 BRWD1Q9NSI6 2320 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 IGHV3-64DA0A0J9YX35 117 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 HIGD1CA8MV81 97 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 PEX7O00628 323 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 NUDT3O95989 172 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 PSG1P11464 419 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 PRDX2P32119 198 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 MPV17P39210 176 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 UBE2L3P68036 154 aaKnown RBP7.9□□□□□ -1.14
SYNE1-230ENST00000495090 HBBP68871 147 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 HIST1H1AQ02539 215 aaPredicted RBP7.9□□□□□ -1.14
SYNE1-230ENST00000495090 MZT1Q08AG7 82 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 INO80CQ6PI98 192 aaPredicted RBP7.9□□□□□ -1.14
SYNE1-230ENST00000495090 CXorf67Q86X51 503 aaPredicted RBP7.9□□□□□ -1.14
SYNE1-230ENST00000495090 CACNG8Q8WXS5 425 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 PMCHL2Q9BQD1 86 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 SSBP3Q9BWW4 388 aaPredicted RBP7.9□□□□□ -1.14
SYNE1-230ENST00000495090 SLC25A2Q9BXI2 301 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 FAM234AQ9H0X4 552 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 ABI3Q9P2A4 366 aa7.9□□□□□ -1.14
SYNE1-230ENST00000495090 PEF1Q9UBV8 284 aaKnown RBP7.9□□□□□ -1.14
SYNE1-230ENST00000495090 PCSK5Q92824 1860 aa7.9□□□□□ -1.15
SYNE1-230ENST00000495090 IGHV1-24A0A0C4DH33 117 aa7.9□□□□□ -1.15
SYNE1-230ENST00000495090 SP9P0CG40 484 aa7.9□□□□□ -1.15
SYNE1-230ENST00000495090 ZNF134P52741 427 aa7.9□□□□□ -1.15
SYNE1-230ENST00000495090 ABHD17BQ5VST6 288 aa7.9□□□□□ -1.15
SYNE1-230ENST00000495090 PRR27Q6MZM9 219 aa7.9□□□□□ -1.15
SYNE1-230ENST00000495090 ZNF329Q86UD4 541 aa7.9□□□□□ -1.15
SYNE1-230ENST00000495090 KIR3DL3Q8N743 410 aa7.9□□□□□ -1.15
SYNE1-230ENST00000495090 OR2T6Q8NHC8 308 aa7.9□□□□□ -1.15
SYNE1-230ENST00000495090 CT55Q8WUE5 264 aa7.9□□□□□ -1.15
SYNE1-230ENST00000495090 DCTN5Q9BTE1 182 aa7.9□□□□□ -1.15
SYNE1-230ENST00000495090 CLCF1Q9UBD9 225 aa7.9□□□□□ -1.15
SYNE1-230ENST00000495090 OR2T8A6NH00 312 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 CBY3A6NI87 242 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 J3KRW8 73 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 LEPROTL1O95214 131 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 LIPFP07098 398 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 COL8A2P25067 703 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 CXCL12P48061 93 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 CD69Q07108 199 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 EDDM3AQ14507 147 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 LTC4SQ16873 150 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 RNFT1Q5M7Z0 435 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 GCSAMQ8N6F7 178 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 GFRA4Q9GZZ7 299 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 CLEC5AQ9NY25 188 aa7.89□□□□□ -1.15
SYNE1-230ENST00000495090 MUC21A0A0G2JKD1 596 aa7.88□□□□□ -1.15
SYNE1-230ENST00000495090 MUC21A0A140T8X8 626 aa7.88□□□□□ -1.15
SYNE1-230ENST00000495090 FAM231BA6NCW3 169 aa7.88□□□□□ -1.15
SYNE1-230ENST00000495090 INS-IGF2F8WCM5 200 aa7.88□□□□□ -1.15
SYNE1-230ENST00000495090 UPK2O00526 184 aa7.88□□□□□ -1.15
SYNE1-230ENST00000495090 TFF1P04155 84 aa7.88□□□□□ -1.15
SYNE1-230ENST00000495090 CGB3P0DN86 165 aa7.88□□□□□ -1.15
SYNE1-230ENST00000495090 CGB7P0DN87 165 aa7.88□□□□□ -1.15
SYNE1-230ENST00000495090 CFHR2P36980 270 aa7.88□□□□□ -1.15
SYNE1-230ENST00000495090 MYCNOSP40205 109 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms