RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 RPL24P83731 157 aaKnown RBP3.93□□□□□ -1.78
PRKD3-210ENST00000494667 TMEM92Q6UXU6 159 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 LINC00173Q6ZV60 143 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 RD3Q7Z3Z2 195 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 MMABQ96EY8 250 aaPredicted RBP3.93□□□□□ -1.78
PRKD3-210ENST00000494667 MLST8Q9BVC4 326 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 DUSP13Q9UII6 198 aa3.93□□□□□ -1.78
PRKD3-210ENST00000494667 MYO7BQ6PIF6 2116 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 A0A1W2PP55 124 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 ZNF716A6NP11 495 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 MGST3O14880 152 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 ERVK11-1P61568 191 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 CEACAM16Q2WEN9 425 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 ZNF841Q6ZN19 808 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 SBSPONQ8IVN8 264 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 OR1L3Q8NH93 324 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 CCL4L1Q8NHW4 92 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 IL1F10Q8WWZ1 152 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 CITED2Q99967 270 aaPredicted RBP3.92□□□□□ -1.78
PRKD3-210ENST00000494667 DLL3Q9NYJ7 618 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 WNT16Q9UBV4 365 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 TDRD6O60522 2096 aaKnown RBP3.92□□□□□ -1.78
PRKD3-210ENST00000494667 GFRA3O60609 400 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 ZNF16P17020 682 aaPredicted RBP3.92□□□□□ -1.78
PRKD3-210ENST00000494667 MFAP2P55001 183 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 EDDM3BP56851 147 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 SHISA2Q6UWI4 295 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.92□□□□□ -1.781e-13■■■■■ 63.2
PRKD3-210ENST00000494667 RPRMLQ8N4K4 120 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 STPG3Q8N7X2 389 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 SNRNP40Q96DI7 357 aaKnown RBP3.92□□□□□ -1.78
PRKD3-210ENST00000494667 HSD17B10Q99714 261 aaKnown RBP3.92□□□□□ -1.78
PRKD3-210ENST00000494667 CITED1Q99966 193 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 NUDT22Q9BRQ3 303 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 MRPS17Q9Y2R5 130 aaKnown RBP3.92□□□□□ -1.78
PRKD3-210ENST00000494667 R4GN57 208 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 CACNA1CQ13936 2221 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 IGLV3-12A0A075B6K2 115 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 OTOL1A6NHN0 477 aaPredicted RBP3.92□□□□□ -1.78
PRKD3-210ENST00000494667 TNFRSF4P43489 277 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 TAS2R45P59539 299 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 PPP1CAP62136 330 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 MIC13Q5XKP0 118 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 ABHD12Q8N2K0 398 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 ZADH2Q8N4Q0 377 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 SLC37A2Q8TED4 501 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 C1QTNF4Q9BXJ3 329 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 OR2H1Q9GZK4 316 aa3.92□□□□□ -1.78
PRKD3-210ENST00000494667 C2orf72A6NCS6 295 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 PRKNO60260 465 aaPredicted RBP3.91□□□□□ -1.78
PRKD3-210ENST00000494667 KLF7O75840 302 aaPredicted RBP3.91□□□□□ -1.78
PRKD3-210ENST00000494667 DEFA4P12838 97 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 TNFRSF1AP19438 455 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 ANKRD37Q7Z713 158 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 C17orf82Q86X59 251 aaPredicted RBP3.91□□□□□ -1.78
PRKD3-210ENST00000494667 Q8IYB0 196 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 ZDHHC16Q969W1 377 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 FCGR2BP31994 310 aaPredicted RBP3.91□□□□□ -1.78
PRKD3-210ENST00000494667 FOXI1Q12951 378 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 RUNX3Q13761 415 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 FXYD3Q14802 87 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 ZNF146Q15072 292 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 GUSBP1Q15486 140 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 FAM168AQ92567 244 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 ZNF714Q96N38 554 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 C18orf15Q96N68 181 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 DEPPQ9NTK1 212 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 A0A096LNJ9 63 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 CENPVL3A0A0U1RRI6 287 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 TEX50A0A1B0GTY4 177 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 INS-IGF2F8WCM5 200 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 WIPF1O43516 503 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 BRI3O95415 125 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 RPL30P62888 115 aaKnown RBP3.91□□□□□ -1.78
PRKD3-210ENST00000494667 AESQ08117 197 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 DEFB110Q30KQ9 67 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 C1orf53Q5VUE5 145 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 Q6ZR03 302 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 ZNF493Q6ZR52 646 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 Q6ZUT4 128 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 RND1Q92730 232 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 FAM167A-AS1Q96KT0 104 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 KBTBD11-OT1A0A1B0GTJ5 212 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 IGLL5B9A064 214 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 NDUFS7O75251 213 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 G6PCP35575 357 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 CSN1S1P47710 185 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 ARF1P84077 181 aaKnown RBP3.91□□□□□ -1.78
PRKD3-210ENST00000494667 POU2AF1Q16633 256 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 SPATA31B1PQ5VZV4 182 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 FAM180AQ6UWF9 173 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 H2BFWTQ7Z2G1 175 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 PPP1R32Q7Z5V6 425 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 HS3ST6Q96QI5 342 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 SLC25A33Q9BSK2 321 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 RPP21Q9H633 154 aaKnown RBP3.91□□□□□ -1.78
PRKD3-210ENST00000494667 MPC1Q9Y5U8 109 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 DOCK11Q5JSL3 2073 aa3.91□□□□□ -1.78
PRKD3-210ENST00000494667 HIGD1CA8MV81 97 aa3.9□□□□□ -1.78
PRKD3-210ENST00000494667 A8MWL6 223 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms