RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 P0C879 139 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 ELLP55199 621 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-219ENST00000494069 HSPE1P61604 102 aaKnown RBP6.36□□□□□ -1.39
LRCH3-219ENST00000494069 PRCDQ00LT1 54 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 SCGB2B2Q4G0G5 96 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 RBPMS2Q6ZRY4 209 aaKnown RBP6.36□□□□□ -1.39
LRCH3-219ENST00000494069 SLC16A13Q7RTY0 426 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 GPR141Q7Z602 305 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 CLVS1Q8IUQ0 354 aaPredicted RBP6.36□□□□□ -1.39
LRCH3-219ENST00000494069 TMEM229BQ8NBD8 167 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 OR13C8Q8NGS7 320 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 TERB2Q8NHR7 220 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 MARCH1Q8TCQ1 289 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 PINX1Q96BK5 328 aaKnown RBP6.36□□□□□ -1.39
LRCH3-219ENST00000494069 C5orf66Q9H5L9 145 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 IGHV3OR16-13A0A075B7E8 117 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 IGHV3-74A0A0B4J1X5 117 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 TRAV25A0A0B4J276 109 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 C3orf85A0A1B0GTC6 90 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 ST8SIA3O43173 380 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 YIF1AO95070 293 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 RAB3DO95716 219 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 ETV6P41212 452 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 MFAP4P55083 255 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 TAS2R19P59542 299 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 MLANAQ16655 118 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 STEAP1BQ6NZ63 245 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 SPSB3Q6PJ21 355 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 Q6ZRM9 215 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 ARRDC1Q8N5I2 433 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 OR1L6Q8NGR2 347 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 LHFPL5Q8TAF8 219 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 RNF2Q99496 336 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 RTBDNQ9BSG5 229 aaPredicted RBP6.35□□□□□ -1.39
LRCH3-219ENST00000494069 DAZ1Q9NQZ3 744 aaKnown RBP6.35□□□□□ -1.39
LRCH3-219ENST00000494069 MRPL36Q9P0J6 103 aaKnown RBP6.35□□□□□ -1.39
LRCH3-219ENST00000494069 ALMS1Q8TCU4 4167 aa6.35□□□□□ -1.39
LRCH3-219ENST00000494069 IGKV3-7A0A075B6H7 116 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 LOC102724200A0A096LPH7 203 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-219ENST00000494069 LCE6AA0A183 80 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 GABARAPH6UMI1 98 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 K7EMT4 169 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 TSPAN4O14817 238 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 NUPL2O15504 423 aaKnown RBP6.34□□□□□ -1.39
LRCH3-219ENST00000494069 CTSDP07339 412 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-219ENST00000494069 OR5AC1P0C628 307 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 TBPP20226 339 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 UCP1P25874 307 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 AKR1C2P52895 323 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 ERHP84090 104 aaKnown RBP6.34□□□□□ -1.39
LRCH3-219ENST00000494069 ZNF124Q15973 351 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 TRIM16LQ309B1 348 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 ANKRD55Q3KP44 614 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 ODF3L2Q3SX64 289 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 LILRB2Q8N423 598 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 ZNF114Q8NC26 417 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 DYNC2LI1Q8TCX1 351 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 ZNF486Q96H40 463 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-219ENST00000494069 ATP6V0BQ99437 205 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 SPAG8Q99932 426 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-219ENST00000494069 OVOL2Q9BRP0 275 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 GGTLC1Q9BX51 225 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 NXF2Q9GZY0 626 aaKnown RBP6.34□□□□□ -1.39
LRCH3-219ENST00000494069 PRR13Q9NZ81 148 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 COPZ2Q9P299 210 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 SMPXQ9UHP9 88 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 BIRC6Q9NR09 4857 aa6.34□□□□□ -1.39
LRCH3-219ENST00000494069 IGHV3-66A0A0C4DH42 116 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 IGHV7-4-1A0A0J9YVY3 117 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 C15orf62A8K5M9 175 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 CHEK1O14757 476 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 GNG7O60262 68 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 IFNA17P01571 189 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 APOHP02749 345 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-219ENST00000494069 RNASE2P10153 161 aaKnown RBP6.33□□□□□ -1.4
LRCH3-219ENST00000494069 FCGR2BP31994 310 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-219ENST00000494069 TFPI2P48307 235 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 TOMM20LQ6UXN7 152 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 APRG1Q8IVJ8 170 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 OR4C16Q8NGL9 310 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 ZFAND1Q8TCF1 268 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 GLYATL2Q8WU03 294 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 SMIM4Q8WVI0 70 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 DIRAS2Q96HU8 199 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 OR10C1Q96KK4 312 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 RHPN1-AS1Q9BWJ2 59 aa6.33□□□□□ -1.4
LRCH3-219ENST00000494069 FNDC4Q9H6D8 234 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-219ENST00000494069 TEX13DA0A0J9YY54 714 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-219ENST00000494069 A0A1B0GU03 582 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 TMEM238LA0A1B0GVL6 79 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 INS-IGF2F8WCM5 200 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 NXPH3O95157 252 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 TMEM50AO95807 157 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 RPL35AP18077 110 aaKnown RBP6.32□□□□□ -1.4
LRCH3-219ENST00000494069 SNCAP37840 140 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 HOXA1P49639 335 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-219ENST00000494069 TMBIM6P55061 237 aa6.32□□□□□ -1.4
LRCH3-219ENST00000494069 EWSR1Q01844 656 aaKnown RBP eCLIP6.32□□□□□ -1.4
LRCH3-219ENST00000494069 RELQ04864 619 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-219ENST00000494069 IL18Q14116 193 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms