RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 IGKV1D-39P04432 117 aa9.13□□□□□ -0.95
COL2A1-208ENST00000493991 ARL14EPLP0DKL9 152 aa9.13□□□□□ -0.95
COL2A1-208ENST00000493991 TMEM208Q9BTX3 173 aa9.13□□□□□ -0.95
COL2A1-208ENST00000493991 LRP4O75096 1905 aa9.13□□□□□ -0.95
COL2A1-208ENST00000493991 IGHV3OR16-13A0A075B7E8 117 aa9.13□□□□□ -0.95
COL2A1-208ENST00000493991 IGHV3-74A0A0B4J1X5 117 aa9.13□□□□□ -0.95
COL2A1-208ENST00000493991 KBTBD11O94819 623 aa9.13□□□□□ -0.95
COL2A1-208ENST00000493991 UBE2G1P62253 170 aa9.13□□□□□ -0.95
COL2A1-208ENST00000493991 JOSD1Q15040 202 aaPredicted RBP9.13□□□□□ -0.95
COL2A1-208ENST00000493991 PIP4P1Q86T03 277 aa9.13□□□□□ -0.95
COL2A1-208ENST00000493991 KBTBD11-OT1A0A1B0GTJ5 212 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 MMP23AO75900 390 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 ZNF137PP52743 207 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 HLA-DRB5Q30154 266 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 COL5A1-AS1Q5SY13 56 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 LYPD2Q6UXB3 125 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 RPP25LQ8N5L8 163 aaKnown RBP9.12□□□□□ -0.95
COL2A1-208ENST00000493991 LSM10Q969L4 123 aaKnown RBP9.12□□□□□ -0.95
COL2A1-208ENST00000493991 DKK4Q9UBT3 224 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 FOXI3A8MTJ6 420 aaPredicted RBP9.12□□□□□ -0.95
COL2A1-208ENST00000493991 IGFBP2P18065 325 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 DUTP33316 252 aaKnown RBP9.12□□□□□ -0.95
COL2A1-208ENST00000493991 GNG4P50150 75 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 RND2P52198 227 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 RHOBP62745 196 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 Q5PR19 223 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 TEX38Q6PEX7 206 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 C22orf34Q6ZV56 151 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 PNKDQ8N490 385 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 NPIPB3Q92617 1050 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 JPT1Q9UK76 154 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 PKD1L2Q7Z442 2459 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 SNAI2O43623 268 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 IGKV1-16P04430 117 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 GRNP28799 593 aaKnown RBP9.12□□□□□ -0.95
COL2A1-208ENST00000493991 HSPE1P61604 102 aaKnown RBP9.12□□□□□ -0.95
COL2A1-208ENST00000493991 C1orf162Q8NEQ5 155 aaPredicted RBP9.12□□□□□ -0.95
COL2A1-208ENST00000493991 RNF115Q9Y4L5 304 aa9.12□□□□□ -0.95
COL2A1-208ENST00000493991 IFITM10A6NMD0 228 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 CEACAM18A8MTB9 384 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 GCGP01275 180 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 RPL8P62917 257 aaKnown RBP9.11□□□□□ -0.95
COL2A1-208ENST00000493991 TBR1Q16650 682 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 MSMPQ1L6U9 139 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 CT45A1Q5HYN5 189 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 CT45A3Q8NHU0 189 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 RAB1CQ92928 201 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 NPCDR1Q9BY65 106 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 RAB1BQ9H0U4 201 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 MRPL18Q9H0U6 180 aaKnown RBP9.11□□□□□ -0.95
COL2A1-208ENST00000493991 SMDT1Q9H4I9 107 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 NPVFQ9HCQ7 196 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 ATMQ13315 3056 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 CCKARP32238 428 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 SERF2P84101 59 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 S100A7AQ86SG5 101 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 OR1L8Q8NGR8 309 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 TMUB1Q9BVT8 246 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 WASHC3Q9Y3C0 194 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 NUP210LQ5VU65 1888 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 A8MWP6 167 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 LINC00869P0C866 280 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 TMPRSS3P57727 454 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 ATP6V1FQ16864 119 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 SPATA45Q537H7 98 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 FAM90A2PQ658T7 463 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 FBXL15Q9H469 300 aa9.11□□□□□ -0.95
COL2A1-208ENST00000493991 PPIAL4CA0A0B4J2A2 164 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 SCO2A0A1W2PP80 73 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 PPIAL4GP0DN37 164 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 TAS2R45P59539 299 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 LRTM2Q8N967 370 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 PARD6GQ9BYG4 376 aaPredicted RBP9.1□□□□□ -0.95
COL2A1-208ENST00000493991 IL19Q9UHD0 177 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 SERF1AO75920 110 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 IGHV3-23P01764 117 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 SLC25A5P05141 298 aaKnown RBP9.1□□□□□ -0.95
COL2A1-208ENST00000493991 OR2D3Q8NGH3 330 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 OR2T6Q8NHC8 308 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 DIRC2Q96SL1 478 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 KCNIP2Q9NS61 270 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 PRNDQ9UKY0 176 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 ZNF462Q96JM2 2506 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 ADGRG4Q8IZF6 3080 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 TANC2Q9HCD6 1990 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 J3QW42 95 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 CRYBB3P26998 211 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 IL15RAQ13261 267 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 LRRC75BQ2VPJ9 315 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 PQLC2Q6ZP29 291 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 RNASE6Q93091 150 aaKnown RBP9.1□□□□□ -0.95
COL2A1-208ENST00000493991 ADTRPQ96IZ2 230 aa9.1□□□□□ -0.95
COL2A1-208ENST00000493991 A1L4Q6 167 aa9.09□□□□□ -0.95
COL2A1-208ENST00000493991 MBD3L4A6NDZ8 208 aaPredicted RBP9.09□□□□□ -0.95
COL2A1-208ENST00000493991 MBD3L3A6NE82 208 aaPredicted RBP9.09□□□□□ -0.95
COL2A1-208ENST00000493991 MBD3L5A6NJ08 208 aaPredicted RBP9.09□□□□□ -0.95
COL2A1-208ENST00000493991 DLEU1O43261 78 aa9.09□□□□□ -0.95
COL2A1-208ENST00000493991 CA1P00915 261 aaPredicted RBP9.09□□□□□ -0.95
COL2A1-208ENST00000493991 CT45A6P0DMU7 189 aa9.09□□□□□ -0.95
COL2A1-208ENST00000493991 CT45A5P0DMU8 189 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms