RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 PAX2Q02962 417 aa8.07□□□□□ -1.12
PRPF3-206ENST00000493553 CD69Q07108 199 aa8.07□□□□□ -1.12
PRPF3-206ENST00000493553 UTF1Q5T230 341 aa8.07□□□□□ -1.12
PRPF3-206ENST00000493553 TPTE2P1Q5T6R2 138 aa8.07□□□□□ -1.12
PRPF3-206ENST00000493553 ACSM6Q6P461 480 aa8.07□□□□□ -1.12
PRPF3-206ENST00000493553 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.07□□□□□ -1.12
PRPF3-206ENST00000493553 ZNF114Q8NC26 417 aa8.07□□□□□ -1.12
PRPF3-206ENST00000493553 OR4P4Q8NGL7 312 aa8.07□□□□□ -1.12
PRPF3-206ENST00000493553 RXFP4Q8TDU9 374 aa8.07□□□□□ -1.12
PRPF3-206ENST00000493553 GGTLC1Q9BX51 225 aa8.07□□□□□ -1.12
PRPF3-206ENST00000493553 ZNF430Q9H8G1 570 aaPredicted RBP8.07□□□□□ -1.12
PRPF3-206ENST00000493553 TMA7Q9Y2S6 64 aaKnown RBP8.07□□□□□ -1.12
PRPF3-206ENST00000493553 TBL2Q9Y4P3 447 aaKnown RBP8.07□□□□□ -1.12
PRPF3-206ENST00000493553 PXMP4Q9Y6I8 212 aa8.07□□□□□ -1.12
PRPF3-206ENST00000493553 ZFHX4Q86UP3 3567 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 BOD1L1Q8NFC6 3051 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 A0A1B0GV50 99 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 C7orf77A4D0Y5 90 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 ZFP92A6NM28 416 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 OVOL3O00110 214 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 SLC25A17O43808 307 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 CLN5O75503 358 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 FABP1P07148 127 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 SNRNP70P08621 437 aaKnown RBP8.06□□□□□ -1.12
PRPF3-206ENST00000493553 OR13C7P0DN81 318 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 LGALS4P56470 323 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 B2MP61769 119 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 HABP2Q14520 560 aaPredicted RBP8.06□□□□□ -1.12
PRPF3-206ENST00000493553 PSG5Q15238 335 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 ZNF726P1Q15940 193 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 FAM122CQ6P4D5 195 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 ATRAIDQ6UW56 229 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 S100A7AQ86SG5 101 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 KRTAP3-1Q9BYR8 98 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 CTDSP1Q9GZU7 261 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 LPAR2Q9HBW0 351 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 RPS10P5Q9NQ39 176 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 TMEM167BQ9NRX6 74 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 SLC45A2Q9UMX9 530 aa8.06□□□□□ -1.12
PRPF3-206ENST00000493553 RAI1Q7Z5J4 1906 aaPredicted RBP8.05□□□□□ -1.12
PRPF3-206ENST00000493553 HCFC1P51610 2035 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 YLPM1P49750 1951 aaKnown RBP8.05□□□□□ -1.12
PRPF3-206ENST00000493553 ODF3BA8MYP8 253 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 C9JQL5 133 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 H3BQ15 152 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 VENTXO95231 258 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 IGHV2-5P01817 119 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 MT-ND4LP03901 98 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 COX7A1P24310 79 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 NPBWR1P48145 328 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 DSCR9P59020 149 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 RNF212Q495C1 297 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 AWAT1Q58HT5 328 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 PVRIGQ6DKI7 326 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 PQLC2Q6ZP29 291 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 SLC16A13Q7RTY0 426 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 PPP1R27Q86WC6 154 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 OR1L4Q8NGR5 311 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 OR2T10Q8NGZ9 312 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 OR1P1Q8NH06 330 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 GATAD1Q8WUU5 269 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 TMEM170AQ8WVE7 144 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 BTF3L4Q96K17 158 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 PFDN5Q99471 154 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 MGST2Q99735 147 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 SSX3Q99909 188 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 RARRES2Q99969 163 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 MRPL32Q9BYC8 188 aaKnown RBP8.05□□□□□ -1.12
PRPF3-206ENST00000493553 VSIRQ9H7M9 311 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 SLC25A22Q9H936 323 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 TMEM242Q9NWH2 141 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 C1RLQ9NZP8 487 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 SIGLEC9Q9Y336 463 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 DOCK11Q5JSL3 2073 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 DOPEY1Q5JWR5 2465 aa8.05□□□□□ -1.12
PRPF3-206ENST00000493553 TGOLN2O43493 480 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 SCGB2A1O75556 95 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 MOSP00540 346 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 CRYGBP07316 175 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 STAG3L2P0CL84 134 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 STAG3L3P0CL85 134 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 BRS3P32247 399 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 UQCRFS1P47985 274 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 BPIFB3P59826 476 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 ARF6P62330 175 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 PLGLAQ15195 96 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 Q8N7P7 452 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 CYB561D1Q8N8Q1 229 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 STXBP6Q8NFX7 210 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 NPBQ8NG41 125 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 C8orf49Q96NF6 230 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 UHRF2Q96PU4 802 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 TECRQ9NZ01 308 aaKnown RBP8.04□□□□□ -1.12
PRPF3-206ENST00000493553 ZNRD1Q9P1U0 126 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 METTL1Q9UBP6 276 aaKnown RBP8.04□□□□□ -1.12
PRPF3-206ENST00000493553 NAT8Q9UHE5 227 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 PUS1Q9Y606 427 aaKnown RBP eCLIP8.04□□□□□ -1.12
PRPF3-206ENST00000493553 RFNGQ9Y644 331 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 CFAP47Q6ZTR5 3102 aa8.04□□□□□ -1.12
PRPF3-206ENST00000493553 SPTAN1Q13813 2472 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms