RNA–Protein interactions for RNA: ENST00000492763.1

FAM3A-219, Transcript of family with sequence similarity 3 member A, human

TSL 3

Gene FAM3A, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3A-219	ENST00000492763	IFNA17	P01571	189 aa		11.21	□□□□□ -0.61
FAM3A-219	ENST00000492763	FOLR2	P14207	255 aa		11.21	□□□□□ -0.61
FAM3A-219	ENST00000492763	CBLN1	P23435	193 aa		11.21	□□□□□ -0.61
FAM3A-219	ENST00000492763	GPR183	P32249	361 aa		11.21	□□□□□ -0.61
FAM3A-219	ENST00000492763	SNCA	P37840	140 aa		11.21	□□□□□ -0.61
FAM3A-219	ENST00000492763	UBE2M	P61081	183 aa	Known RBP	11.21	□□□□□ -0.61
FAM3A-219	ENST00000492763	DEFB114	Q30KQ6	69 aa		11.21	□□□□□ -0.61
FAM3A-219	ENST00000492763	CNPY1	Q3B7I2	92 aa		11.21	□□□□□ -0.61
FAM3A-219	ENST00000492763	ADAMTSL5	Q6ZMM2	481 aa		11.21	□□□□□ -0.61
FAM3A-219	ENST00000492763	SLC35G3	Q8N808	338 aa		11.21	□□□□□ -0.61
FAM3A-219	ENST00000492763	LRTM2	Q8N967	370 aa		11.21	□□□□□ -0.61
FAM3A-219	ENST00000492763	LHFPL5	Q8TAF8	219 aa		11.21	□□□□□ -0.61
FAM3A-219	ENST00000492763		A0A0G2JRQ6	117 aa		11.2	□□□□□ -0.62
FAM3A-219	ENST00000492763	TMEM213	A2RRL7	107 aa		11.2	□□□□□ -0.62
FAM3A-219	ENST00000492763	MFAP4	P55083	255 aa		11.2	□□□□□ -0.62
FAM3A-219	ENST00000492763	ATP5I	P56385	69 aa	Predicted RBP	11.2	□□□□□ -0.62
FAM3A-219	ENST00000492763	SUPT4H1	P63272	117 aa	Known RBP	11.2	□□□□□ -0.62
FAM3A-219	ENST00000492763	REL	Q04864	619 aa	Predicted RBP	11.2	□□□□□ -0.62
FAM3A-219	ENST00000492763	TMEM268	Q5VZI3	342 aa		11.2	□□□□□ -0.62
FAM3A-219	ENST00000492763		Q6ZRM9	215 aa		11.2	□□□□□ -0.62
FAM3A-219	ENST00000492763	LGI3	Q8N145	548 aa		11.2	□□□□□ -0.62
FAM3A-219	ENST00000492763	RNASE11	Q8TAA1	199 aa	Known RBP	11.2	□□□□□ -0.62
FAM3A-219	ENST00000492763	TMEM190	Q8WZ59	177 aa		11.2	□□□□□ -0.62
FAM3A-219	ENST00000492763	C7orf50	Q9BRJ6	194 aa	Known RBP	11.2	□□□□□ -0.62
FAM3A-219	ENST00000492763	C15orf62	A8K5M9	175 aa		11.19	□□□□□ -0.62
FAM3A-219	ENST00000492763	IGHV3-23	P01764	117 aa		11.19	□□□□□ -0.62
FAM3A-219	ENST00000492763	CTSG	P08311	255 aa		11.19	□□□□□ -0.62
FAM3A-219	ENST00000492763	SLC25A6	P12236	298 aa		11.19	□□□□□ -0.62
FAM3A-219	ENST00000492763	HTR2B	P41595	481 aa		11.19	□□□□□ -0.62
FAM3A-219	ENST00000492763	CCR6	P51684	374 aa		11.19	□□□□□ -0.62
FAM3A-219	ENST00000492763	RBMS2	Q15434	407 aa	Known RBP	11.19	□□□□□ -0.62
FAM3A-219	ENST00000492763	NMS	Q5H8A3	153 aa		11.19	□□□□□ -0.62
FAM3A-219	ENST00000492763	GTSCR1	Q86UQ5	136 aa		11.19	□□□□□ -0.62
FAM3A-219	ENST00000492763	NOXA1	Q86UR1	476 aa		11.19	□□□□□ -0.62
FAM3A-219	ENST00000492763	ENY2	Q9NPA8	101 aa		11.19	□□□□□ -0.62
FAM3A-219	ENST00000492763	DAZ1	Q9NQZ3	744 aa	Known RBP	11.19	□□□□□ -0.62
FAM3A-219	ENST00000492763	C19orf73	Q9NVV2	129 aa		11.19	□□□□□ -0.62
FAM3A-219	ENST00000492763	NUPL2	O15504	423 aa	Known RBP	11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763	MT-CO2	P00403	227 aa		11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763	SULT1A3	P0DMM9	295 aa		11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763	SULT1A4	P0DMN0	295 aa		11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763	RNASE2	P10153	161 aa	Known RBP	11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763	ADM	P35318	185 aa		11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763	NPBWR1	P48145	328 aa		11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763	IZUMO4	Q1ZYL8	232 aa		11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763	CD300E	Q496F6	205 aa	Predicted RBP	11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763	DYNLRB2	Q8TF09	96 aa		11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763	GPR146	Q96CH1	333 aa		11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763	OR10C1	Q96KK4	312 aa		11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763		S4R3C0	116 aa		11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763	COL7A1	Q02388	2944 aa		11.18	□□□□□ -0.62
FAM3A-219	ENST00000492763	SORL1	Q92673	2214 aa		11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763		A0A1B0GU03	582 aa		11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763	ZNF320	A2RRD8	509 aa		11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763	OR2T8	A6NH00	312 aa		11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763	ZNF785	A8K8V0	405 aa		11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763	AKR1C4	P17516	323 aa		11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763	HOXA1	P49639	335 aa	Predicted RBP	11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763	ANKRD55	Q3KP44	614 aa		11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763	C2orf83	Q53S99	150 aa		11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763	ZNF57	Q68EA5	555 aa	Predicted RBP	11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763	UNQ9165/PRO28630	Q6UXU0	137 aa		11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763	DUSP18	Q8NEJ0	188 aa		11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763	CACNG5	Q9UF02	275 aa		11.17	□□□□□ -0.62
FAM3A-219	ENST00000492763	CENPX	A8MT69	81 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	SCGB2A1	O75556	95 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	CD5	P06127	495 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	IGHV4-30-4	P0DP06	118 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	INPP1	P49441	399 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	SMCO1	Q147U7	214 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	BAK1	Q16611	211 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763		Q56UQ5	140 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	TRIQK	Q629K1	86 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	UXS1	Q8NBZ7	420 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	MISP3	Q96FF7	219 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	SDHC	Q99643	169 aa	Predicted RBP	11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	CHRDL1	Q9BU40	450 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	HIPK2	Q9H2X6	1198 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	HSPB7	Q9UBY9	170 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	TMED3	Q9Y3Q3	217 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763		U3KQ87	197 aa		11.16	□□□□□ -0.62
FAM3A-219	ENST00000492763	TRAV30	A0A087WSZ9	112 aa		11.15	□□□□□ -0.62
FAM3A-219	ENST00000492763	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.15	□□□□□ -0.62
FAM3A-219	ENST00000492763	FAM90A26	D6RGX4	464 aa		11.15	□□□□□ -0.62
FAM3A-219	ENST00000492763	GNG7	O60262	68 aa		11.15	□□□□□ -0.62
FAM3A-219	ENST00000492763	NDUFB6	O95139	128 aa		11.15	□□□□□ -0.62
FAM3A-219	ENST00000492763	FRMD6-AS1	P0C7T7	363 aa		11.15	□□□□□ -0.62
FAM3A-219	ENST00000492763	TNFRSF9	Q07011	255 aa		11.15	□□□□□ -0.62
FAM3A-219	ENST00000492763	HAPLN4	Q86UW8	402 aa		11.15	□□□□□ -0.62
FAM3A-219	ENST00000492763	CENPS	Q8N2Z9	138 aa		11.15	□□□□□ -0.62
FAM3A-219	ENST00000492763	OR4X1	Q8NH49	305 aa		11.15	□□□□□ -0.62
FAM3A-219	ENST00000492763	FAM110A	Q9BQ89	295 aa		11.15	□□□□□ -0.62
FAM3A-219	ENST00000492763	MLX	Q9UH92	298 aa		11.15	□□□□□ -0.62
FAM3A-219	ENST00000492763	IZUMO1R	A6ND01	250 aa		11.14	□□□□□ -0.63
FAM3A-219	ENST00000492763	PITX3	O75364	302 aa		11.14	□□□□□ -0.63
FAM3A-219	ENST00000492763	SFT2D2	O95562	160 aa		11.14	□□□□□ -0.63
FAM3A-219	ENST00000492763	SLC25A4	P12235	298 aa		11.14	□□□□□ -0.63
FAM3A-219	ENST00000492763	TM4SF20	Q53R12	229 aa		11.14	□□□□□ -0.63
FAM3A-219	ENST00000492763	LAMTOR1	Q6IAA8	161 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms