RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 SNCAP37840 140 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 AKR1C2P52895 323 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 MFAP2P55001 183 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 VBP1P61758 197 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 MRPS10P82664 201 aaKnown RBP6.51□□□□□ -1.37
NUP50-217ENST00000491860 SSBP1Q04837 148 aaKnown RBP6.51□□□□□ -1.37
NUP50-217ENST00000491860 SLC35G3Q8N808 338 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 DUSP18Q8NEJ0 188 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 GATAD1Q8WUU5 269 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 RNF183Q96D59 192 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 NXF2Q9GZY0 626 aaKnown RBP6.51□□□□□ -1.37
NUP50-217ENST00000491860 ENY2Q9NPA8 101 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 COPZ2Q9P299 210 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 KLK5Q9Y337 293 aaPredicted RBP6.51□□□□□ -1.37
NUP50-217ENST00000491860 FRAS1Q86XX4 4008 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 A0A1W2PS18 150 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 CXorf65A6NEN9 183 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 CHEK1O14757 476 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 DFFBO76075 338 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 MT-CO2P00403 227 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 CTSDP07339 412 aaPredicted RBP6.5□□□□□ -1.37
NUP50-217ENST00000491860 ZNF182P17025 639 aaPredicted RBP6.5□□□□□ -1.37
NUP50-217ENST00000491860 ELK1P19419 428 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 PIGPP57054 158 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 TAS2R19P59542 299 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 NCS1P62166 190 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 ODF3L2Q3SX64 289 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 LYG2Q86SG7 212 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 FAM219AQ8IW50 185 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 MRGPRFQ96AM1 343 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 RRNAD1Q96FB5 475 aaKnown RBP6.5□□□□□ -1.37
NUP50-217ENST00000491860 NARS2Q96I59 477 aaKnown RBP6.5□□□□□ -1.37
NUP50-217ENST00000491860 RHPN1-AS1Q9BWJ2 59 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 MAP6D1Q9H9H5 199 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 MTFP1Q9UDX5 166 aa6.5□□□□□ -1.37
NUP50-217ENST00000491860 TRAV30A0A087WSZ9 112 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 IGHV3-21A0A0B4J1V1 117 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 C3orf85A0A1B0GTC6 90 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 DBX1A6NMT0 343 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 MPTX1A8MV57 137 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 HPGDSO60760 199 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 GABARAPO95166 117 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 IFNA17P01571 189 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 RPL5P46777 297 aaKnown RBP6.49□□□□□ -1.37
NUP50-217ENST00000491860 EIF2B2P49770 351 aaKnown RBP6.49□□□□□ -1.37
NUP50-217ENST00000491860 MEF2DQ14814 521 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 SURF2Q15527 256 aaPredicted RBP6.49□□□□□ -1.37
NUP50-217ENST00000491860 TRIM16LQ309B1 348 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 DEFB135Q30KP9 77 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 TMEM41BQ5BJD5 291 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 ZNF600Q6ZNG1 722 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 LHFPL1Q86WI0 220 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 TMEM229BQ8NBD8 167 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 TERB2Q8NHR7 220 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 RNASE11Q8TAA1 199 aaKnown RBP6.49□□□□□ -1.37
NUP50-217ENST00000491860 PINX1Q96BK5 328 aaKnown RBP6.49□□□□□ -1.37
NUP50-217ENST00000491860 RNF2Q99496 336 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 MFFQ9GZY8 342 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 CSTL1Q9H114 145 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 EXTL2Q9UBQ6 330 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 UBQLN2Q9UHD9 624 aa6.49□□□□□ -1.37
NUP50-217ENST00000491860 PCLOQ9Y6V0 5065 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 PIGBOS1A0A0B4J2F0 54 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 A0A0J9YWU9 116 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 RPS10-NUDT3A0A1W2PQS6 291 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 GABARAPH6UMI1 98 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 DNASE2O00115 360 aaPredicted RBP6.48□□□□□ -1.37
NUP50-217ENST00000491860 ZNF207O43670 478 aaKnown RBP6.48□□□□□ -1.37
NUP50-217ENST00000491860 IGKV1-39P01597 117 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 CD3DP04234 171 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 IGKV1D-39P04432 117 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 HOXA1P49639 335 aaPredicted RBP6.48□□□□□ -1.37
NUP50-217ENST00000491860 DHODHQ02127 395 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 PVRIGQ6DKI7 326 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 CEMP1Q6PRD7 247 aaPredicted RBP6.48□□□□□ -1.37
NUP50-217ENST00000491860 NOXA1Q86UR1 476 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 OR52E5Q8NH55 327 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 GRAMD2BQ96HH9 432 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 ABHD1Q96SE0 405 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 VSIRQ9H7M9 311 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 KLK11Q9UBX7 282 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 C14orf166Q9Y224 244 aaKnown RBP6.48□□□□□ -1.37
NUP50-217ENST00000491860 SELENOKQ9Y6D0 94 aa6.48□□□□□ -1.37
NUP50-217ENST00000491860 DISC1C4P0D8 188 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 M0QYG6 137 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 ST8SIA3O43173 380 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 RAB3DO95716 219 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 CD74P04233 296 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 NPPCP23582 126 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 UCP1P25874 307 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 HTR2BP41595 481 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 SPCS3P61009 180 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 CTF1Q16619 201 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 GPR107Q5VW38 600 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 FAM90A2PQ658T7 463 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 STEAP1BQ6NZ63 245 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 TOMM20LQ6UXN7 152 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 TCF24Q7RTU0 167 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 OR4X1Q8NH49 305 aa6.47□□□□□ -1.37
NUP50-217ENST00000491860 OR52I2Q8NH67 350 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms