RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 EXTL2Q9UBQ6 330 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 CTDSP2O14595 271 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 SPRY2O43597 315 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 DEDDO75618 318 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 TNFAIP8O95379 198 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 LY6G6CO95867 125 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 P0C879 139 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 RCVRNP35243 200 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 ELLP55199 621 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-211ENST00000491581 PIGPP57054 158 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 PRCDQ00LT1 54 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 MEF2DQ14814 521 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 SPCS2Q15005 226 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 FAM90A2PQ658T7 463 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 TOMM20LQ6UXN7 152 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 LHFPL1Q86WI0 220 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 CROCCP3Q8IVE0 287 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 TMEM116Q8NCL8 245 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 OR4A16Q8NH70 328 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 MARCH1Q8TCQ1 289 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 LINC00476Q8WZB0 136 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 SPAG8Q99932 426 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-211ENST00000491581 SRSF8Q9BRL6 282 aaKnown RBP6.55□□□□□ -1.36
HDAC3-211ENST00000491581 AIFM2Q9BRQ8 373 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 FNDC4Q9H6D8 234 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-211ENST00000491581 ZFAND3Q9H8U3 227 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 MAP6D1Q9H9H5 199 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 THYN1Q9P016 225 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 PRNDQ9UKY0 176 aa6.55□□□□□ -1.36
HDAC3-211ENST00000491581 AGRNO00468 2067 aa6.54□□□□□ -1.36
HDAC3-211ENST00000491581 TRAV25A0A0B4J276 109 aa6.54□□□□□ -1.36
HDAC3-211ENST00000491581 DFFBO76075 338 aa6.54□□□□□ -1.36
HDAC3-211ENST00000491581 RNASE2P10153 161 aaKnown RBP6.54□□□□□ -1.36
HDAC3-211ENST00000491581 NANOS2P60321 138 aaKnown RBP6.54□□□□□ -1.36
HDAC3-211ENST00000491581 HSPE1P61604 102 aaKnown RBP6.54□□□□□ -1.36
HDAC3-211ENST00000491581 SCGB2B2Q4G0G5 96 aa6.54□□□□□ -1.36
HDAC3-211ENST00000491581 TCF24Q7RTU0 167 aa6.54□□□□□ -1.36
HDAC3-211ENST00000491581 OR13C8Q8NGS7 320 aa6.54□□□□□ -1.36
HDAC3-211ENST00000491581 OR1P1Q8NH06 330 aa6.54□□□□□ -1.36
HDAC3-211ENST00000491581 MARC2Q969Z3 335 aa6.54□□□□□ -1.36
HDAC3-211ENST00000491581 TMEM56Q96MV1 263 aa6.54□□□□□ -1.36
HDAC3-211ENST00000491581 NXF2Q9GZY0 626 aaKnown RBP6.54□□□□□ -1.36
HDAC3-211ENST00000491581 PUS1Q9Y606 427 aaKnown RBP eCLIP6.54□□□□□ -1.36
HDAC3-211ENST00000491581 FRAS1Q86XX4 4008 aa6.54□□□□□ -1.36
HDAC3-211ENST00000491581 C3orf85A0A1B0GTC6 90 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 SMIM31A0A1B0GVY4 71 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 C15orf62A8K5M9 175 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 K7EMT4 169 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 GNG7O60262 68 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 JTBO76095 146 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 GABARAPO95166 117 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 RORCP51449 518 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 MFAP4P55083 255 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 UCP3P55916 312 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 ANKRD55Q3KP44 614 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 TIGITQ495A1 244 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 RNASE10Q5GAN6 216 aaKnown RBP6.53□□□□□ -1.36
HDAC3-211ENST00000491581 SPSB3Q6PJ21 355 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 SLC38A6Q8IZM9 456 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 TMEM170AQ8WVE7 144 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 RNF183Q96D59 192 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 OR10C1Q96KK4 312 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 SCPEP1Q9HB40 452 aa6.53□□□□□ -1.36
HDAC3-211ENST00000491581 TRAV14DV4A0A0A6YYC5 116 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 OR4C46A6NHA9 309 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 KNCNA6PVL3 124 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 TMEM50AO95807 157 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 IFNA17P01571 189 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 FGF2P09038 288 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 OR5AC1P0C628 307 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 AKR1C2P52895 323 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 APOC4P55056 127 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 DEFB131AP59861 70 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 DEFB1P60022 68 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 RBMS2Q15434 407 aaKnown RBP6.52□□□□□ -1.37
HDAC3-211ENST00000491581 TRIM16LQ309B1 348 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 THOC7Q6I9Y2 204 aaKnown RBP6.52□□□□□ -1.37
HDAC3-211ENST00000491581 LAMTOR1Q6IAA8 161 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 HSD17B13Q7Z5P4 300 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-211ENST00000491581 STPG3Q8N7X2 389 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 ZNF114Q8NC26 417 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 BORCS5Q969J3 196 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 RTBDNQ9BSG5 229 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-211ENST00000491581 MS4A6AQ9H2W1 248 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 VCX3AQ9NNX9 186 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 MTFP1Q9UDX5 166 aa6.52□□□□□ -1.37
HDAC3-211ENST00000491581 RGS5O15539 181 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 TMEM127O75204 238 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 RAB3DO95716 219 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 GIG44P09565 113 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-211ENST00000491581 ZNF182P17025 639 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-211ENST00000491581 C4BPBP20851 252 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 BMI1P35226 326 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 HOXA1P49639 335 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-211ENST00000491581 RND3P61587 244 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 RPL11P62913 178 aaKnown RBP6.51□□□□□ -1.37
HDAC3-211ENST00000491581 CEMP1Q6PRD7 247 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-211ENST00000491581 Q6ZWC4 215 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 SLC35G3Q8N808 338 aa6.51□□□□□ -1.37
HDAC3-211ENST00000491581 TMEM230Q96A57 120 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms