RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 FCGR2BP31994 310 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-220ENST00000491319 TFPI2P48307 235 aa11.6□□□□□ -0.55
SMPD4-220ENST00000491319 GALNT14Q96FL9 552 aa11.6□□□□□ -0.55
SMPD4-220ENST00000491319 NXF2Q9GZY0 626 aaKnown RBP11.6□□□□□ -0.55
SMPD4-220ENST00000491319 MAP6D1Q9H9H5 199 aa11.6□□□□□ -0.55
SMPD4-220ENST00000491319 GNG7O60262 68 aa11.59□□□□□ -0.55
SMPD4-220ENST00000491319 HSPE1P61604 102 aaKnown RBP11.59□□□□□ -0.55
SMPD4-220ENST00000491319 TXN2Q99757 166 aa11.59□□□□□ -0.55
SMPD4-220ENST00000491319 TRAV14DV4A0A0A6YYC5 116 aa11.58□□□□□ -0.56
SMPD4-220ENST00000491319 FAM25AB3EWG3 89 aa11.58□□□□□ -0.56
SMPD4-220ENST00000491319 FAM25CB3EWG5 89 aa11.58□□□□□ -0.56
SMPD4-220ENST00000491319 FAM25GB3EWG6 89 aa11.58□□□□□ -0.56
SMPD4-220ENST00000491319 LY6G6CO95867 125 aa11.58□□□□□ -0.56
SMPD4-220ENST00000491319 IGKV1-5P01602 117 aa11.58□□□□□ -0.56
SMPD4-220ENST00000491319 PGAM2P15259 253 aa11.58□□□□□ -0.56
SMPD4-220ENST00000491319 PIGPP57054 158 aa11.58□□□□□ -0.56
SMPD4-220ENST00000491319 RND3P61587 244 aa11.58□□□□□ -0.56
SMPD4-220ENST00000491319 ERHP84090 104 aaKnown RBP11.58□□□□□ -0.56
SMPD4-220ENST00000491319 LHFPL1Q86WI0 220 aa11.58□□□□□ -0.56
SMPD4-220ENST00000491319 TP53RKQ96S44 253 aa11.58□□□□□ -0.56
SMPD4-220ENST00000491319 KLK11Q9UBX7 282 aa11.58□□□□□ -0.56
SMPD4-220ENST00000491319 P0C879 139 aa11.57□□□□□ -0.56
SMPD4-220ENST00000491319 RORCP51449 518 aa11.57□□□□□ -0.56
SMPD4-220ENST00000491319 AKR1C2P52895 323 aa11.57□□□□□ -0.56
SMPD4-220ENST00000491319 PPP5CP53041 499 aa11.57□□□□□ -0.56
SMPD4-220ENST00000491319 RNASE10Q5GAN6 216 aaKnown RBP11.57□□□□□ -0.56
SMPD4-220ENST00000491319 FAM90A2PQ658T7 463 aa11.57□□□□□ -0.56
SMPD4-220ENST00000491319 CEMP1Q6PRD7 247 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-220ENST00000491319 GBGT1Q8N5D6 347 aa11.57□□□□□ -0.56
SMPD4-220ENST00000491319 SLC35G3Q8N808 338 aa11.57□□□□□ -0.56
SMPD4-220ENST00000491319 OR52I2Q8NH67 350 aa11.57□□□□□ -0.56
SMPD4-220ENST00000491319 NAA50Q9GZZ1 169 aaKnown RBP11.57□□□□□ -0.56
SMPD4-220ENST00000491319 ST8SIA3O43173 380 aa11.56□□□□□ -0.56
SMPD4-220ENST00000491319 APOHP02749 345 aaPredicted RBP11.56□□□□□ -0.56
SMPD4-220ENST00000491319 CD3DP04234 171 aa11.56□□□□□ -0.56
SMPD4-220ENST00000491319 ATF4P18848 351 aaPredicted RBP11.56□□□□□ -0.56
SMPD4-220ENST00000491319 TOMM20LQ6UXN7 152 aa11.56□□□□□ -0.56
SMPD4-220ENST00000491319 TCF24Q7RTU0 167 aa11.56□□□□□ -0.56
SMPD4-220ENST00000491319 OR4D10Q8NGI6 311 aa11.56□□□□□ -0.56
SMPD4-220ENST00000491319 ST8SIA2Q92186 375 aa11.56□□□□□ -0.56
SMPD4-220ENST00000491319 ZNF486Q96H40 463 aaPredicted RBP11.56□□□□□ -0.56
SMPD4-220ENST00000491319 GINS3Q9BRX5 216 aa11.56□□□□□ -0.56
SMPD4-220ENST00000491319 C6orf62Q9GZU0 229 aaPredicted RBP11.56□□□□□ -0.56
SMPD4-220ENST00000491319 ZFAND3Q9H8U3 227 aa11.56□□□□□ -0.56
SMPD4-220ENST00000491319 A0A0B4J293 547 aa11.55□□□□□ -0.56
SMPD4-220ENST00000491319 IGHV3-66A0A0C4DH42 116 aa11.55□□□□□ -0.56
SMPD4-220ENST00000491319 MZT2AQ6P582 158 aa11.55□□□□□ -0.56
SMPD4-220ENST00000491319 ARRDC1Q8N5I2 433 aa11.55□□□□□ -0.56
SMPD4-220ENST00000491319 CSTL1Q9H114 145 aa11.55□□□□□ -0.56
SMPD4-220ENST00000491319 EXTL2Q9UBQ6 330 aa11.55□□□□□ -0.56
SMPD4-220ENST00000491319 PUS1Q9Y606 427 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMPD4-220ENST00000491319 A0A0G2JRQ6 117 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 C3orf85A0A1B0GTC6 90 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 A0A1B0GU03 582 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 MPTX1A8MV57 137 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 GABARAPO95166 117 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 IFNA17P01571 189 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 RNASE2P10153 161 aaKnown RBP11.54□□□□□ -0.56
SMPD4-220ENST00000491319 SNCAP37840 140 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 NPBWR1P48145 328 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 HOXA1P49639 335 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-220ENST00000491319 CTF1Q16619 201 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 SP6Q3SY56 376 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 ZNF600Q6ZNG1 722 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 LILRB2Q8N423 598 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 TMEM217Q8N7C4 229 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 DUSP18Q8NEJ0 188 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 VSIRQ9H7M9 311 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 MRPL36Q9P0J6 103 aaKnown RBP11.54□□□□□ -0.56
SMPD4-220ENST00000491319 MTFP1Q9UDX5 166 aa11.54□□□□□ -0.56
SMPD4-220ENST00000491319 INS-IGF2F8WCM5 200 aa11.53□□□□□ -0.56
SMPD4-220ENST00000491319 DFFBO76075 338 aa11.53□□□□□ -0.56
SMPD4-220ENST00000491319 SMIM18P0DKX4 95 aa11.53□□□□□ -0.56
SMPD4-220ENST00000491319 ETV6P41212 452 aa11.53□□□□□ -0.56
SMPD4-220ENST00000491319 CMC4P56277 68 aaPredicted RBP11.53□□□□□ -0.56
SMPD4-220ENST00000491319 TRIM16LQ309B1 348 aa11.53□□□□□ -0.56
SMPD4-220ENST00000491319 PVRIGQ6DKI7 326 aa11.53□□□□□ -0.56
SMPD4-220ENST00000491319 FAM24BQ8N5W8 94 aa11.53□□□□□ -0.56
SMPD4-220ENST00000491319 OR13C8Q8NGS7 320 aa11.53□□□□□ -0.56
SMPD4-220ENST00000491319 AP3S1Q92572 193 aa11.53□□□□□ -0.56
SMPD4-220ENST00000491319 ABHD1Q96SE0 405 aa11.53□□□□□ -0.56
SMPD4-220ENST00000491319 PDCD10Q9BUL8 212 aa11.53□□□□□ -0.56
SMPD4-220ENST00000491319 MS4A6AQ9H2W1 248 aa11.53□□□□□ -0.56
SMPD4-220ENST00000491319 COPZ2Q9P299 210 aa11.53□□□□□ -0.56
SMPD4-220ENST00000491319 KLK5Q9Y337 293 aaPredicted RBP11.53□□□□□ -0.56
SMPD4-220ENST00000491319 TMEM50AO95807 157 aa11.52□□□□□ -0.57
SMPD4-220ENST00000491319 ZNF182P17025 639 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-220ENST00000491319 TBPP20226 339 aa11.52□□□□□ -0.57
SMPD4-220ENST00000491319 PAFAH1B2P68402 229 aa11.52□□□□□ -0.57
SMPD4-220ENST00000491319 SCGB2B2Q4G0G5 96 aa11.52□□□□□ -0.57
SMPD4-220ENST00000491319 LEMD1Q68G75 181 aa11.52□□□□□ -0.57
SMPD4-220ENST00000491319 CCDC71LQ8N9Z2 235 aa11.52□□□□□ -0.57
SMPD4-220ENST00000491319 GATAD1Q8WUU5 269 aa11.52□□□□□ -0.57
SMPD4-220ENST00000491319 PHLDA1Q8WV24 401 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-220ENST00000491319 RARRES2Q99969 163 aa11.52□□□□□ -0.57
SMPD4-220ENST00000491319 FNDC4Q9H6D8 234 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-220ENST00000491319 DNASE2O00115 360 aaPredicted RBP11.51□□□□□ -0.57
SMPD4-220ENST00000491319 CORTO00230 105 aa11.51□□□□□ -0.57
SMPD4-220ENST00000491319 ATG12O94817 140 aa11.51□□□□□ -0.57
SMPD4-220ENST00000491319 CA1P00915 261 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms