RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 MT-CO2P00403 227 aa23.49■■□□□ 1.35
LDB1-204ENST00000490751 CTSGP08311 255 aa23.49■■□□□ 1.35
LDB1-204ENST00000490751 SLC35G3Q8N808 338 aa23.49■■□□□ 1.35
LDB1-204ENST00000490751 ISOC1Q96CN7 298 aa23.49■■□□□ 1.35
LDB1-204ENST00000490751 HIPK2Q9H2X6 1198 aa23.49■■□□□ 1.35
LDB1-204ENST00000490751 C5orf66Q9H5L9 145 aa23.49■■□□□ 1.35
LDB1-204ENST00000490751 C14orf166Q9Y224 244 aaKnown RBP23.49■■□□□ 1.35
LDB1-204ENST00000490751 RYR3Q15413 4870 aa23.49■■□□□ 1.35
LDB1-204ENST00000490751 H3BMQ9 156 aa23.48■■□□□ 1.35
LDB1-204ENST00000490751 ST8SIA3O43173 380 aa23.48■■□□□ 1.35
LDB1-204ENST00000490751 AKAIN1P0CW23 69 aa23.48■■□□□ 1.35
LDB1-204ENST00000490751 LYL1P12980 280 aa23.48■■□□□ 1.35
LDB1-204ENST00000490751 MFAP4P55083 255 aa23.48■■□□□ 1.35
LDB1-204ENST00000490751 OR4C16Q8NGL9 310 aa23.48■■□□□ 1.35
LDB1-204ENST00000490751 PINX1Q96BK5 328 aaKnown RBP23.48■■□□□ 1.35
LDB1-204ENST00000490751 NUPL2O15504 423 aaKnown RBP23.47■■□□□ 1.35
LDB1-204ENST00000490751 ZNF207O43670 478 aaKnown RBP23.47■■□□□ 1.35
LDB1-204ENST00000490751 B3GALNT1O75752 331 aa23.47■■□□□ 1.35
LDB1-204ENST00000490751 IFNA17P01571 189 aa23.47■■□□□ 1.35
LDB1-204ENST00000490751 IGHV3-48P01763 117 aa23.47■■□□□ 1.35
LDB1-204ENST00000490751 RRNAD1Q96FB5 475 aaKnown RBP23.47■■□□□ 1.35
LDB1-204ENST00000490751 PDCD10Q9BUL8 212 aa23.47■■□□□ 1.35
LDB1-204ENST00000490751 SLIRPQ9GZT3 109 aaKnown RBP23.47■■□□□ 1.35
LDB1-204ENST00000490751 A0A0G2JRQ6 117 aa23.46■■□□□ 1.35
LDB1-204ENST00000490751 K7EMT4 169 aa23.46■■□□□ 1.35
LDB1-204ENST00000490751 OR5AC1P0C628 307 aa23.46■■□□□ 1.35
LDB1-204ENST00000490751 FCGR2BP31994 310 aaPredicted RBP23.46■■□□□ 1.35
LDB1-204ENST00000490751 RELQ04864 619 aaPredicted RBP23.46■■□□□ 1.35
LDB1-204ENST00000490751 RNASE11Q8TAA1 199 aaKnown RBP23.46■■□□□ 1.35
LDB1-204ENST00000490751 ZNF414Q96IQ9 312 aa23.46■■□□□ 1.35
LDB1-204ENST00000490751 TXN2Q99757 166 aa23.46■■□□□ 1.35
LDB1-204ENST00000490751 RTBDNQ9BSG5 229 aaPredicted RBP23.46■■□□□ 1.35
LDB1-204ENST00000490751 SURF2Q15527 256 aaPredicted RBP23.45■■□□□ 1.34
LDB1-204ENST00000490751 SPAG8Q99932 426 aaPredicted RBP23.45■■□□□ 1.34
LDB1-204ENST00000490751 FAM110AQ9BQ89 295 aa23.45■■□□□ 1.34
LDB1-204ENST00000490751 C15orf62A8K5M9 175 aa23.44■■□□□ 1.34
LDB1-204ENST00000490751 INS-IGF2F8WCM5 200 aa23.44■■□□□ 1.34
LDB1-204ENST00000490751 SNCAP37840 140 aa23.44■■□□□ 1.34
LDB1-204ENST00000490751 TMEM222Q9H0R3 208 aa23.44■■□□□ 1.34
LDB1-204ENST00000490751 NAA60Q9H7X0 242 aa23.44■■□□□ 1.34
LDB1-204ENST00000490751 TEX13DA0A0J9YY54 714 aaPredicted RBP23.43■■□□□ 1.34
LDB1-204ENST00000490751 ETV6P41212 452 aa23.43■■□□□ 1.34
LDB1-204ENST00000490751 HOXA1P49639 335 aaPredicted RBP23.43■■□□□ 1.34
LDB1-204ENST00000490751 LAMTOR1Q6IAA8 161 aa23.43■■□□□ 1.34
LDB1-204ENST00000490751 PRRT1Q99946 306 aa23.43■■□□□ 1.34
LDB1-204ENST00000490751 RSL24D1Q9UHA3 163 aaKnown RBP23.43■■□□□ 1.34
LDB1-204ENST00000490751 GPR132Q9UNW8 380 aa23.43■■□□□ 1.34
LDB1-204ENST00000490751 TSPAN4O14817 238 aa23.42■■□□□ 1.34
LDB1-204ENST00000490751 GSTZ1O43708 216 aaPredicted RBP23.42■■□□□ 1.34
LDB1-204ENST00000490751 GNG7O60262 68 aa23.42■■□□□ 1.34
LDB1-204ENST00000490751 CDS2O95674 445 aa23.42■■□□□ 1.34
LDB1-204ENST00000490751 OR51S1Q8NGJ8 323 aa23.42■■□□□ 1.34
LDB1-204ENST00000490751 LHFPL5Q8TAF8 219 aa23.42■■□□□ 1.34
LDB1-204ENST00000490751 GLYATL2Q8WU03 294 aa23.42■■□□□ 1.34
LDB1-204ENST00000490751 NXF2Q9GZY0 626 aaKnown RBP23.42■■□□□ 1.34
LDB1-204ENST00000490751 ANKRD20A5PA0PJZ0 165 aa23.41■■□□□ 1.34
LDB1-204ENST00000490751 YIF1AO95070 293 aa23.41■■□□□ 1.34
LDB1-204ENST00000490751 TNFSF8P32971 234 aa23.41■■□□□ 1.34
LDB1-204ENST00000490751 ZFAND6Q6FIF0 208 aa23.41■■□□□ 1.34
LDB1-204ENST00000490751 Q6ZRM9 215 aa23.41■■□□□ 1.34
LDB1-204ENST00000490751 MCFD2Q8NI22 146 aa23.41■■□□□ 1.34
LDB1-204ENST00000490751 RNASE2P10153 161 aaKnown RBP23.4■■□□□ 1.34
LDB1-204ENST00000490751 FAM219AQ8IW50 185 aa23.4■■□□□ 1.34
LDB1-204ENST00000490751 GGTLC1Q9BX51 225 aa23.4■■□□□ 1.34
LDB1-204ENST00000490751 ENY2Q9NPA8 101 aa23.4■■□□□ 1.34
LDB1-204ENST00000490751 SMPXQ9UHP9 88 aa23.4■■□□□ 1.34
LDB1-204ENST00000490751 CRYM-AS1A6NIL9 109 aa23.39■■□□□ 1.33
LDB1-204ENST00000490751 SUB1P53999 127 aaKnown RBP eCLIP23.39■■□□□ 1.33
LDB1-204ENST00000490751 DHODHQ02127 395 aa23.39■■□□□ 1.33
LDB1-204ENST00000490751 RBPMSQ93062 196 aaKnown RBP23.39■■□□□ 1.33
LDB1-204ENST00000490751 OR10C1Q96KK4 312 aa23.39■■□□□ 1.33
LDB1-204ENST00000490751 SOSTQ9BQB4 213 aa23.39■■□□□ 1.33
LDB1-204ENST00000490751 UBQLN2Q9UHD9 624 aa23.39■■□□□ 1.33
LDB1-204ENST00000490751 DYNC2H1Q8NCM8 4307 aaKnown RBP23.38■■□□□ 1.33
LDB1-204ENST00000490751 LOC102724200A0A096LPH7 203 aaPredicted RBP23.38■■□□□ 1.33
LDB1-204ENST00000490751 IGHV7-4-1A0A0J9YVY3 117 aa23.38■■□□□ 1.33
LDB1-204ENST00000490751 FABP12A6NFH5 140 aa23.38■■□□□ 1.33
LDB1-204ENST00000490751 NPBWR1P48145 328 aa23.38■■□□□ 1.33
LDB1-204ENST00000490751 PVRIGQ6DKI7 326 aa23.38■■□□□ 1.33
LDB1-204ENST00000490751 SELENOHQ8IZQ5 122 aaKnown RBP23.38■■□□□ 1.33
LDB1-204ENST00000490751 DUSP18Q8NEJ0 188 aa23.38■■□□□ 1.33
LDB1-204ENST00000490751 CORTO00230 105 aa23.37■■□□□ 1.33
LDB1-204ENST00000490751 TMEM116Q8NCL8 245 aa23.37■■□□□ 1.33
LDB1-204ENST00000490751 SCP2D1Q9UJQ7 156 aa23.37■■□□□ 1.33
LDB1-204ENST00000490751 IGHV3-49A0A0A0MS15 119 aa23.36■■□□□ 1.33
LDB1-204ENST00000490751 TMEM268Q5VZI3 342 aa23.36■■□□□ 1.33
LDB1-204ENST00000490751 RNF2Q99496 336 aa23.36■■□□□ 1.33
LDB1-204ENST00000490751 RHPN1-AS1Q9BWJ2 59 aa23.36■■□□□ 1.33
LDB1-204ENST00000490751 CTNNBIP1Q9NSA3 81 aaPredicted RBP23.36■■□□□ 1.33
LDB1-204ENST00000490751 MCUBQ9NWR8 336 aa23.36■■□□□ 1.33
LDB1-204ENST00000490751 OR4C46A6NHA9 309 aa23.35■■□□□ 1.33
LDB1-204ENST00000490751 CHEK1O14757 476 aa23.35■■□□□ 1.33
LDB1-204ENST00000490751 SPCS3P61009 180 aa23.35■■□□□ 1.33
LDB1-204ENST00000490751 AARDQ4LEZ3 155 aa23.35■■□□□ 1.33
LDB1-204ENST00000490751 GPR146Q96CH1 333 aa23.35■■□□□ 1.33
LDB1-204ENST00000490751 CACNG5Q9UF02 275 aa23.35■■□□□ 1.33
LDB1-204ENST00000490751 ODF3L2Q3SX64 289 aa23.34■■□□□ 1.33
LDB1-204ENST00000490751 OR52E5Q8NH55 327 aa23.34■■□□□ 1.33
LDB1-204ENST00000490751 TMEM230Q96A57 120 aa23.34■■□□□ 1.33
LDB1-204ENST00000490751 TRAV14DV4A0A0A6YYC5 116 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms