RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	ENY2	Q9NPA8	101 aa		14.15	□□□□□ -0.14
C4A-256	ENST00000490663	SHPK	Q9UHJ6	478 aa		14.15	□□□□□ -0.14
C4A-256	ENST00000490663	TRAV6	A0A075B6T7	132 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	C9orf170	A2RU37	121 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	CEBPZOS	A8MTT3	80 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	MT-CO2	P00403	227 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	CSN3	P07498	182 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	HOXB5	P09067	269 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	SPN	P16150	400 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	SNCA	P37840	140 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	SPCS3	P61009	180 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	UBE2M	P61081	183 aa	Known RBP	14.14	□□□□□ -0.15
C4A-256	ENST00000490663		Q56UQ5	140 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	OR52B4	Q8NGK2	314 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	VN1R17P	Q8TDU5	208 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	CHRDL1	Q9BU40	450 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	ELOVL1	Q9BW60	279 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	C20orf85	Q9H1P6	137 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	C21orf62	Q9NYP8	219 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	TBC1D24	Q9ULP9	559 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	COL7A1	Q02388	2944 aa		14.14	□□□□□ -0.15
C4A-256	ENST00000490663	IGHV3OR16-8	A0A075B7F1	116 aa		14.13	□□□□□ -0.15
C4A-256	ENST00000490663		I3L2K1	104 aa		14.13	□□□□□ -0.15
C4A-256	ENST00000490663	TGOLN2	O43493	480 aa		14.13	□□□□□ -0.15
C4A-256	ENST00000490663	SRPX	P78539	464 aa		14.13	□□□□□ -0.15
C4A-256	ENST00000490663	ZNF846	Q147U1	533 aa		14.13	□□□□□ -0.15
C4A-256	ENST00000490663	SMCO1	Q147U7	214 aa		14.13	□□□□□ -0.15
C4A-256	ENST00000490663	PLET1	Q6UQ28	207 aa		14.13	□□□□□ -0.15
C4A-256	ENST00000490663	UNQ9165/PRO28630	Q6UXU0	137 aa		14.13	□□□□□ -0.15
C4A-256	ENST00000490663	ADAMTSL5	Q6ZMM2	481 aa		14.13	□□□□□ -0.15
C4A-256	ENST00000490663	REC114	Q7Z4M0	266 aa		14.13	□□□□□ -0.15
C4A-256	ENST00000490663	OR1S1	Q8NH92	325 aa		14.13	□□□□□ -0.15
C4A-256	ENST00000490663	HEYL	Q9NQ87	328 aa	Predicted RBP	14.13	□□□□□ -0.15
C4A-256	ENST00000490663	ZNF320	A2RRD8	509 aa		14.12	□□□□□ -0.15
C4A-256	ENST00000490663	ADAP1	O75689	374 aa		14.12	□□□□□ -0.15
C4A-256	ENST00000490663	OR4E1	P0C645	316 aa		14.12	□□□□□ -0.15
C4A-256	ENST00000490663	INSL3	P51460	131 aa		14.12	□□□□□ -0.15
C4A-256	ENST00000490663	IFITM3	Q01628	133 aa		14.12	□□□□□ -0.15
C4A-256	ENST00000490663	DHRS2	Q13268	280 aa		14.12	□□□□□ -0.15
C4A-256	ENST00000490663	AARD	Q4LEZ3	155 aa		14.12	□□□□□ -0.15
C4A-256	ENST00000490663	LINC00299	Q6ZSB3	139 aa		14.12	□□□□□ -0.15
C4A-256	ENST00000490663	RBKS	Q9H477	322 aa		14.12	□□□□□ -0.15
C4A-256	ENST00000490663	MRPL36	Q9P0J6	103 aa	Known RBP	14.12	□□□□□ -0.15
C4A-256	ENST00000490663	ZNF256	Q9Y2P7	627 aa	Predicted RBP	14.12	□□□□□ -0.15
C4A-256	ENST00000490663	IZUMO1R	A6ND01	250 aa		14.11	□□□□□ -0.15
C4A-256	ENST00000490663	IGLV1-51	P01701	117 aa		14.11	□□□□□ -0.15
C4A-256	ENST00000490663	ADM	P35318	185 aa		14.11	□□□□□ -0.15
C4A-256	ENST00000490663	MLANA	Q16655	118 aa		14.11	□□□□□ -0.15
C4A-256	ENST00000490663	TATDN3	Q17R31	274 aa		14.11	□□□□□ -0.15
C4A-256	ENST00000490663	C4orf46	Q504U0	113 aa		14.11	□□□□□ -0.15
C4A-256	ENST00000490663	DEFB121	Q5J5C9	76 aa		14.11	□□□□□ -0.15
C4A-256	ENST00000490663	FAM209B	Q5JX69	171 aa		14.11	□□□□□ -0.15
C4A-256	ENST00000490663	GGNBP1	Q5YKI7	109 aa		14.11	□□□□□ -0.15
C4A-256	ENST00000490663	LYG2	Q86SG7	212 aa		14.11	□□□□□ -0.15
C4A-256	ENST00000490663	OR1L6	Q8NGR2	347 aa		14.11	□□□□□ -0.15
C4A-256	ENST00000490663	ZNF414	Q96IQ9	312 aa		14.11	□□□□□ -0.15
C4A-256	ENST00000490663	WDR12	Q9GZL7	423 aa	Known RBP	14.11	□□□□□ -0.15
C4A-256	ENST00000490663	C2orf70	A6NJV1	201 aa		14.1	□□□□□ -0.15
C4A-256	ENST00000490663	MPTX1	A8MV57	137 aa		14.1	□□□□□ -0.15
C4A-256	ENST00000490663	INS-IGF2	F8WCM5	200 aa		14.1	□□□□□ -0.15
C4A-256	ENST00000490663	ZNF207	O43670	478 aa	Known RBP	14.1	□□□□□ -0.15
C4A-256	ENST00000490663	TCRB	P04435	133 aa		14.1	□□□□□ -0.15
C4A-256	ENST00000490663	TNFRSF9	Q07011	255 aa		14.1	□□□□□ -0.15
C4A-256	ENST00000490663	TM4SF20	Q53R12	229 aa		14.1	□□□□□ -0.15
C4A-256	ENST00000490663	LRTM2	Q8N967	370 aa		14.1	□□□□□ -0.15
C4A-256	ENST00000490663	OR52E5	Q8NH55	327 aa		14.1	□□□□□ -0.15
C4A-256	ENST00000490663	TMEM170A	Q8WVE7	144 aa		14.1	□□□□□ -0.15
C4A-256	ENST00000490663	FNDC4	Q9H6D8	234 aa	Predicted RBP	14.1	□□□□□ -0.15
C4A-256	ENST00000490663	NUDT15	Q9NV35	164 aa		14.1	□□□□□ -0.15
C4A-256	ENST00000490663	PEMT	Q9UBM1	199 aa		14.1	□□□□□ -0.15
C4A-256	ENST00000490663	DUXB	A0A1W2PPF3	345 aa		14.09	□□□□□ -0.15
C4A-256	ENST00000490663	TMEM213	A2RRL7	107 aa		14.09	□□□□□ -0.15
C4A-256	ENST00000490663	UPK1B	O75841	260 aa		14.09	□□□□□ -0.15
C4A-256	ENST00000490663	IAPP	P10997	89 aa		14.09	□□□□□ -0.15
C4A-256	ENST00000490663	BSX	Q3C1V8	233 aa		14.09	□□□□□ -0.15
C4A-256	ENST00000490663	GPHB5	Q86YW7	130 aa		14.09	□□□□□ -0.15
C4A-256	ENST00000490663	SEC22C	Q9BRL7	303 aa		14.09	□□□□□ -0.15
C4A-256	ENST00000490663	MAGT1	Q9H0U3	335 aa		14.09	□□□□□ -0.15
C4A-256	ENST00000490663	HSPB7	Q9UBY9	170 aa		14.09	□□□□□ -0.15
C4A-256	ENST00000490663		A0A1B0GU03	582 aa		14.08	□□□□□ -0.16
C4A-256	ENST00000490663	FOLR2	P14207	255 aa		14.08	□□□□□ -0.16
C4A-256	ENST00000490663	GP9	P14770	177 aa		14.08	□□□□□ -0.16
C4A-256	ENST00000490663	OPRK1	P41145	380 aa		14.08	□□□□□ -0.16
C4A-256	ENST00000490663	MFAP4	P55083	255 aa		14.08	□□□□□ -0.16
C4A-256	ENST00000490663	FAM106A	Q4KMX7	169 aa		14.08	□□□□□ -0.16
C4A-256	ENST00000490663	SLC24A4	Q8NFF2	622 aa		14.08	□□□□□ -0.16
C4A-256	ENST00000490663	DTD1	Q8TEA8	209 aa		14.08	□□□□□ -0.16
C4A-256	ENST00000490663	DYNLRB2	Q8TF09	96 aa		14.08	□□□□□ -0.16
C4A-256	ENST00000490663	BSCL2	Q96G97	398 aa	Predicted RBP	14.08	□□□□□ -0.16
C4A-256	ENST00000490663	LGALS9	O00182	355 aa		14.07	□□□□□ -0.16
C4A-256	ENST00000490663	PITX3	O75364	302 aa		14.07	□□□□□ -0.16
C4A-256	ENST00000490663	CTSG	P08311	255 aa		14.07	□□□□□ -0.16
C4A-256	ENST00000490663	SUB1	P53999	127 aa	Known RBP eCLIP	14.07	□□□□□ -0.16
C4A-256	ENST00000490663	ASAH1	Q13510	395 aa		14.07	□□□□□ -0.16
C4A-256	ENST00000490663	C20orf24	Q9BUV8	137 aa		14.07	□□□□□ -0.16
C4A-256	ENST00000490663	ZNF436	Q9C0F3	470 aa	Predicted RBP	14.07	□□□□□ -0.16
C4A-256	ENST00000490663	FAM240B	A0A1B0GVZ2	78 aa		14.06	□□□□□ -0.16
C4A-256	ENST00000490663		A8MWP6	167 aa		14.06	□□□□□ -0.16
C4A-256	ENST00000490663	CCS	O14618	274 aa		14.06	□□□□□ -0.16
C4A-256	ENST00000490663	GNG7	O60262	68 aa		14.06	□□□□□ -0.16

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms