RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 TMEM37Q8WXS4 190 aa11.85□□□□□ -0.51
ARHGEF39-205ENST00000490638 CACNG8Q8WXS5 425 aa11.85□□□□□ -0.51
ARHGEF39-205ENST00000490638 OR51M1Q9H341 326 aa11.85□□□□□ -0.51
ARHGEF39-205ENST00000490638 TCRBV4S1A1TA0A5B7 111 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 MAS1LP35410 378 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 CR1LQ2VPA4 569 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 FA2HQ7L5A8 372 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 OR2D3Q8NGH3 330 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 SIAH2O43255 324 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 HSPB1P04792 205 aaKnown RBP11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 GATA3P23771 443 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 PNRC1Q12796 327 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 CYP2G1PQ6ZSU1 146 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 C12orf57Q99622 126 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 SRD5A3Q9H8P0 318 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 CD8AP01732 235 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 AMY1AP04745 511 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 C15orf61A6NNL5 157 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 TGOLN2O43493 480 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 SULT1A2P50226 295 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 ADORA2A-AS1P86434 159 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 FAM162BQ5T6X4 162 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 SPANXN1Q5VSR9 72 aa11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 RNASEH2CQ8TDP1 164 aaKnown RBP11.84□□□□□ -0.51
ARHGEF39-205ENST00000490638 PDZD11Q5EBL8 140 aa11.83□□□□□ -0.52
ARHGEF39-205ENST00000490638 C19orf24Q9BVV8 132 aa11.83□□□□□ -0.52
ARHGEF39-205ENST00000490638 POLQO75417 2590 aa11.83□□□□□ -0.52
ARHGEF39-205ENST00000490638 BCL2P10415 239 aa11.83□□□□□ -0.52
ARHGEF39-205ENST00000490638 TRAF4Q9BUZ4 470 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF39-205ENST00000490638 OR2T8A6NH00 312 aa11.83□□□□□ -0.52
ARHGEF39-205ENST00000490638 IGFBP2P18065 325 aa11.83□□□□□ -0.52
ARHGEF39-205ENST00000490638 AGAP20933 346 aa11.83□□□□□ -0.52
ARHGEF39-205ENST00000490638 LINC00305Q7Z4B0 112 aa11.83□□□□□ -0.52
ARHGEF39-205ENST00000490638 ITLN2Q8WWU7 325 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF39-205ENST00000490638 LINC00862A6NCI5 91 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 BUB1B-PAK6H3BSN5 160 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 NDUFB4O95168 129 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 CGAP01215 116 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 ZP3P21754 424 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 DPPA3Q6W0C5 159 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 SLC25A48Q6ZT89 311 aaKnown RBP11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 TRAV41A0A0B4J266 112 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 FCN1O00602 326 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 MEF2BQ02080 365 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 RRN3P1Q2M238 152 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 GATA2P23769 480 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 HIST1H1AQ02539 215 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 NSUN5P1Q3KNT7 163 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 PRSS3P2Q8NHM4 247 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 LHFPL5Q8TAF8 219 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 SGK494Q96LW2 274 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 TCEAL7Q9BRU2 100 aa11.82□□□□□ -0.52
ARHGEF39-205ENST00000490638 PSMB11A5LHX3 300 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 SRSF7Q16629 238 aaKnown RBP eCLIP11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 CLRN3Q8NCR9 226 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 REG4Q9BYZ8 158 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 RPRMQ9NS64 109 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 CHD7Q9P2D1 2997 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 TDGF1P3P51864 188 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 PRSS8Q16651 343 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 ZNF329Q86UD4 541 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 TRAPPC1Q9Y5R8 145 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 LOC102723971A0A1B0GUV8 181 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 TMEM218A2RU14 115 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 ARL14EPLP0DKL9 152 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 C5orf64Q2M2E5 130 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 ASCL4Q6XD76 172 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 OR11H4Q8NGC9 324 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 Q8TCH9 128 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 C2CD4CQ8TF44 421 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 TXNDC17Q9BRA2 123 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 GGACTQ9BVM4 153 aa11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 TBL2Q9Y4P3 447 aaKnown RBP11.81□□□□□ -0.52
ARHGEF39-205ENST00000490638 SHISA9B4DS77 424 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 IL6RP08887 468 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 NBEAP1P0C6P0 100 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 MYOD1P15172 320 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 NUTF2P61970 127 aaKnown RBP11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 TMEM177Q53S58 311 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 SEM1Q6ZVN7 128 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 FAM24BQ8N5W8 94 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 HSPB7Q9UBY9 170 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 KLF2Q9Y5W3 355 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 SORL1Q92673 2214 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 MFSD2BA6NFX1 497 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 GPX1P07203 203 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 TSPOP30536 169 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 C2orf68Q2NKX9 166 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 ZNF660Q6AZW8 331 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 OR10W1Q8NGF6 305 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 IFT22Q9H7X7 185 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 PEMTQ9UBM1 199 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 CX3CL1P78423 397 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 RIGQ13278 110 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 MRPL54Q6P161 138 aaKnown RBP11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 TMEM144Q7Z5S9 345 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 PRORYQ9H606 182 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 NIT2Q9NQR4 276 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 BET1LQ9NYM9 111 aa11.8□□□□□ -0.52
ARHGEF39-205ENST00000490638 MGPP08493 103 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms