RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 SLC25A6P12236 298 aa11.02□□□□□ -0.65
SRGAP3-208ENST00000490348 KLF5Q13887 457 aaPredicted RBP11.02□□□□□ -0.65
SRGAP3-208ENST00000490348 KPRPQ5T749 579 aaPredicted RBP11.02□□□□□ -0.65
SRGAP3-208ENST00000490348 CLEC19AQ6UXS0 136 aa11.02□□□□□ -0.65
SRGAP3-208ENST00000490348 SCARB1Q8WTV0 552 aa11.02□□□□□ -0.65
SRGAP3-208ENST00000490348 EEF1AKMT3Q96AZ1 226 aa11.02□□□□□ -0.65
SRGAP3-208ENST00000490348 CXorf58Q96LI9 332 aa11.02□□□□□ -0.65
SRGAP3-208ENST00000490348 THYN1Q9P016 225 aa11.02□□□□□ -0.65
SRGAP3-208ENST00000490348 TRBV7-1A0A0A6YYK4 115 aa11.01□□□□□ -0.65
SRGAP3-208ENST00000490348 CLEC3BP05452 202 aa11.01□□□□□ -0.65
SRGAP3-208ENST00000490348 SPNP16150 400 aa11.01□□□□□ -0.65
SRGAP3-208ENST00000490348 BEAN1Q3B7T3 259 aa11.01□□□□□ -0.65
SRGAP3-208ENST00000490348 OR1L6Q8NGR2 347 aa11.01□□□□□ -0.65
SRGAP3-208ENST00000490348 OR1S1Q8NH92 325 aa11.01□□□□□ -0.65
SRGAP3-208ENST00000490348 VN1R17PQ8TDU5 208 aa11.01□□□□□ -0.65
SRGAP3-208ENST00000490348 ZNF431Q8TF32 576 aaPredicted RBP11.01□□□□□ -0.65
SRGAP3-208ENST00000490348 MISP3Q96FF7 219 aa11.01□□□□□ -0.65
SRGAP3-208ENST00000490348 RBKSQ9H477 322 aa11.01□□□□□ -0.65
SRGAP3-208ENST00000490348 PALMDQ9NP74 551 aa11.01□□□□□ -0.65
SRGAP3-208ENST00000490348 ZC4H2Q9NQZ6 224 aa11.01□□□□□ -0.65
SRGAP3-208ENST00000490348 CEBPZOSA8MTT3 80 aa11□□□□□ -0.65
SRGAP3-208ENST00000490348 OVOL1O14753 267 aa11□□□□□ -0.65
SRGAP3-208ENST00000490348 CYB5BO43169 146 aa11□□□□□ -0.65
SRGAP3-208ENST00000490348 IGHV3-48P01763 117 aa11□□□□□ -0.65
SRGAP3-208ENST00000490348 ZP3P21754 424 aa11□□□□□ -0.65
SRGAP3-208ENST00000490348 SNCAP37840 140 aa11□□□□□ -0.65
SRGAP3-208ENST00000490348 SYNJ2BPP57105 145 aa11□□□□□ -0.65
SRGAP3-208ENST00000490348 ENY2Q9NPA8 101 aa11□□□□□ -0.65
SRGAP3-208ENST00000490348 WIPF1O43516 503 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 MT-CO2P00403 227 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 GPR183P32249 361 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 DEFA1P59665 94 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 DEFA3P59666 94 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 RPEL1Q2QD12 228 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 IL34Q6ZMJ4 242 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 DTD1Q8TEA8 209 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 ZNF414Q96IQ9 312 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 OR10C1Q96KK4 312 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 MARVELD1Q9BSK0 173 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 FNDC4Q9H6D8 234 aaPredicted RBP10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 HEYLQ9NQ87 328 aaPredicted RBP10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 C21orf62Q9NYP8 219 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 CACFD1Q9UGQ2 172 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 A0A1B0GVG6 124 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 OR2T8A6NH00 312 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 SEC14L6B5MCN3 397 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 OR2C1O95371 312 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 IL5P05113 134 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 ARL3P36405 182 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 HTR2BP41595 481 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 KRTAP10-11P60412 298 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 MLANAQ16655 118 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 ACSM6Q6P461 480 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 SLC24A4Q8NFF2 622 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 OR4D5Q8NGN0 318 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 PINX1Q96BK5 328 aaKnown RBP10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 MAGT1Q9H0U3 335 aa10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 MRPL36Q9P0J6 103 aaKnown RBP10.99□□□□□ -0.65
SRGAP3-208ENST00000490348 CCSO14618 274 aa10.98□□□□□ -0.65
SRGAP3-208ENST00000490348 GGCTO75223 188 aaKnown RBP10.98□□□□□ -0.65
SRGAP3-208ENST00000490348 ADMP35318 185 aa10.98□□□□□ -0.65
SRGAP3-208ENST00000490348 C2orf83Q53S99 150 aa10.98□□□□□ -0.65
SRGAP3-208ENST00000490348 FAM209BQ5JX69 171 aa10.98□□□□□ -0.65
SRGAP3-208ENST00000490348 CHRDL1Q9BU40 450 aa10.98□□□□□ -0.65
SRGAP3-208ENST00000490348 MCRIP2Q9BUT9 160 aaKnown RBP10.98□□□□□ -0.65
SRGAP3-208ENST00000490348 FAM90A26D6RGX4 464 aa10.97□□□□□ -0.65
SRGAP3-208ENST00000490348 INMT-MINDY4F8WBC2 141 aa10.97□□□□□ -0.65
SRGAP3-208ENST00000490348 TGOLN2O43493 480 aa10.97□□□□□ -0.65
SRGAP3-208ENST00000490348 IFNA21P01568 189 aa10.97□□□□□ -0.65
SRGAP3-208ENST00000490348 SUB1P53999 127 aaKnown RBP eCLIP10.97□□□□□ -0.65
SRGAP3-208ENST00000490348 ID3Q02535 119 aa10.97□□□□□ -0.65
SRGAP3-208ENST00000490348 PLET1Q6UQ28 207 aa10.97□□□□□ -0.65
SRGAP3-208ENST00000490348 C12orf45Q8N5I9 185 aaPredicted RBP10.97□□□□□ -0.65
SRGAP3-208ENST00000490348 UBAC2Q8NBM4 344 aa10.97□□□□□ -0.65
SRGAP3-208ENST00000490348 OR9G4Q8NGQ1 327 aa10.97□□□□□ -0.65
SRGAP3-208ENST00000490348 HIPK2Q9H2X6 1198 aa10.97□□□□□ -0.65
SRGAP3-208ENST00000490348 IGHV3-35A0A0C4DH35 117 aa10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 PRB2P02812 416 aaPredicted RBP10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 CTSGP08311 255 aa10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 IAPPP10997 89 aa10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 EDN2P20800 178 aa10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 NPY1RP25929 384 aa10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 FCGR2BP31994 310 aaPredicted RBP10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 EGFEM1PQ0D2K5 195 aa10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 IAH1Q2TAA2 248 aaPredicted RBP10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 UNQ9165/PRO28630Q6UXU0 137 aa10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 GPHB5Q86YW7 130 aa10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 UXS1Q8NBZ7 420 aa10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 BSCL2Q96G97 398 aaPredicted RBP10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 ATP6V0BQ99437 205 aa10.96□□□□□ -0.65
SRGAP3-208ENST00000490348 SYNGR2O43760 224 aa10.95□□□□□ -0.66
SRGAP3-208ENST00000490348 Q56UQ5 140 aa10.95□□□□□ -0.66
SRGAP3-208ENST00000490348 C9orf66Q5T8R8 295 aa10.95□□□□□ -0.66
SRGAP3-208ENST00000490348 ADAMTSL5Q6ZMM2 481 aa10.95□□□□□ -0.66
SRGAP3-208ENST00000490348 HAPLN4Q86UW8 402 aa10.95□□□□□ -0.66
SRGAP3-208ENST00000490348 ZBTB8BQ8NAP8 495 aaPredicted RBP10.95□□□□□ -0.66
SRGAP3-208ENST00000490348 U3KQ87 197 aa10.95□□□□□ -0.66
SRGAP3-208ENST00000490348 C15orf62A8K5M9 175 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 CORTO00230 105 aa10.94□□□□□ -0.66
SRGAP3-208ENST00000490348 SAP30O75446 220 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms