RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 LRP11Q86VZ4 500 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 MRPL41Q8IXM3 137 aaKnown RBP4.13□□□□□ -1.75
PTPRK-213ENST00000490332 OR4F5Q8NH21 305 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 OR4A5Q8NH83 315 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 CT45A3Q8NHU0 189 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 OSR1Q8TAX0 266 aaPredicted RBP4.13□□□□□ -1.75
PTPRK-213ENST00000490332 DDB2Q92466 427 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 C5orf30Q96GV9 206 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 UHRF2Q96PU4 802 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 OR4F4Q96R69 305 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 RNF2Q99496 336 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 CCL19Q99731 98 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 PYGO2Q9BRQ0 406 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 QTRT1Q9BXR0 403 aaKnown RBP4.13□□□□□ -1.75
PTPRK-213ENST00000490332 IFI27L2Q9H2X8 130 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 VSIRQ9H7M9 311 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 SRD5A3Q9H8P0 318 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 TMEM140Q9NV12 185 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 DOK5Q9P104 306 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 RPUSD1Q9UJJ7 312 aaKnown RBP4.13□□□□□ -1.75
PTPRK-213ENST00000490332 TCF19Q9Y242 345 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 LINC00312Q9Y6C7 94 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 ARL2-SNX15V9GYD0 113 aa4.13□□□□□ -1.75
PTPRK-213ENST00000490332 DOCK11Q5JSL3 2073 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 TRAV9-1A0A075B6T8 112 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 PPIAL4EA0A075B759 164 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 C17orf100A8MU93 164 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 C11orf94C9JXX5 98 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 PPIAL4DF5H284 164 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 INS-IGF2F8WCM5 200 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 UPK2O00526 184 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 TCF21O43680 179 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 PAGE4O60829 102 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 PROP1O75360 226 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 APOA2P02652 100 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 PFN1P07737 140 aaKnown RBP4.12□□□□□ -1.75
PTPRK-213ENST00000490332 IL6RP08887 468 aaPredicted RBP4.12□□□□□ -1.75
PTPRK-213ENST00000490332 STAG3L2P0CL84 134 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 STAG3L3P0CL85 134 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 PPIAL4FP0DN26 164 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 NPY1RP25929 384 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 IL3RAP26951 378 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 MC5RP33032 325 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 GPX4P36969 197 aaPredicted RBP4.12□□□□□ -1.75
PTPRK-213ENST00000490332 ZNF134P52741 427 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 SUB1P53999 127 aaKnown RBP eCLIP4.12□□□□□ -1.75
PTPRK-213ENST00000490332 NDUFA6P56556 154 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 FAM3BP58499 235 aaPredicted RBP4.12□□□□□ -1.75
PTPRK-213ENST00000490332 LCN2P80188 198 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 ERHP84090 104 aaKnown RBP4.12□□□□□ -1.75
PTPRK-213ENST00000490332 ADIRFQ15847 76 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 LTC4SQ16873 150 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 OR4A47Q6IF82 309 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 VHLLQ6RSH7 139 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 SLC25A48Q6ZT89 311 aaKnown RBP4.12□□□□□ -1.75
PTPRK-213ENST00000490332 LYG1Q8N1E2 194 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 PNKDQ8N490 385 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 LINC00311Q8N616 119 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 TPRX1Q8N7U7 411 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 ZNRF1Q8ND25 227 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 SLC24A4Q8NFF2 622 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 OR5B3Q8NH48 314 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 VSTM2AQ8TAG5 236 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 Q8WTZ3 238 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 CACNG8Q8WXS5 425 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 TMEM186Q96B77 213 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 RPUSD4Q96CM3 377 aaKnown RBP4.12□□□□□ -1.75
PTPRK-213ENST00000490332 SLC35E1Q96K37 410 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 RHOVQ96L33 236 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 GAFA1Q96PS6 74 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 DCTN5Q9BTE1 182 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 OR51M1Q9H341 326 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 MS4A5Q9H3V2 200 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 PLEKHA3Q9HB20 300 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 TMEM167BQ9NRX6 74 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 TMEM14BQ9NUH8 114 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 GAR1Q9NY12 217 aaKnown RBP4.12□□□□□ -1.75
PTPRK-213ENST00000490332 BET1LQ9NYM9 111 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 SLC25A10Q9UBX3 287 aaPredicted RBP4.12□□□□□ -1.75
PTPRK-213ENST00000490332 PITPNC1Q9UKF7 332 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 SLC45A2Q9UMX9 530 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 PPIAL4AQ9Y536 164 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 OR51B2Q9Y5P1 312 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 LY96Q9Y6Y9 160 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 NOTCH3Q9UM47 2321 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 HERC2O95714 4834 aa4.12□□□□□ -1.75
PTPRK-213ENST00000490332 IGHV3OR15-7A0A075B7D8 119 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 TGIF2-C20orf24A0A0A6YYL0 155 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 A0A1W2PN81 502 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 PCP4L1A6NKN8 68 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 PPP5D1E7EU14 171 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 J3QR06 171 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 NDUFB3O43676 98 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 FSTL3O95633 263 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 IGKV1D-33P01593 117 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 IGKV1-33P01594 117 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 GYPAP02724 150 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 TYMSP04818 313 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 CXCL1P09341 107 aa4.11□□□□□ -1.75
PTPRK-213ENST00000490332 AREGP15514 252 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms