RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 SCGNO76038 276 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 HPRT1P00492 218 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 REG1AP05451 166 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 PTHLHP12272 177 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 FCGR2CP31995 323 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 BMI1P35226 326 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 MFAP2P55001 183 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 TAS2R31P59538 309 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 GNG2P59768 71 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 WT1-ASQ06250 92 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 TMEM268Q5VZI3 342 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 SFXN4Q6P4A7 337 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 DHRS11Q6UWP2 260 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 SPAG16Q8N0X2 631 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 KIR2DL5AQ8N109 375 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 GVQW1Q8N7I0 195 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 BEST4Q8NFU0 473 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 OR1L6Q8NGR2 347 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 KIR2DL5BQ8NHK3 375 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 RNF183Q96D59 192 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 SPAG8Q99932 426 aaPredicted RBP4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 PLEKHA2Q9HB19 425 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 DAPK2Q9UIK4 370 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 UFC1Q9Y3C8 167 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 HERC2O95714 4834 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 HECTD4Q9Y4D8 3996 aa4.68□□□□□ -1.66
PRPF40A-210ENST00000489741 A0A0A6YYH2 397 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 IGHV3-35A0A0C4DH35 117 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 TEX50A0A1B0GTY4 177 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 NUPR2A6NF83 97 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 A6NJ64 397 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 K7EMT4 169 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 SULT1C2O00338 296 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 NDUFA4O00483 81 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 TGOLN2O43493 480 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 TNFSF12O43508 249 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 LY6G6CO95867 125 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 PPYP01298 95 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 SERPINE2P07093 398 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 DEFA4P12838 97 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 NQO2P16083 231 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 GNRHRP30968 328 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 GPR183P32249 361 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 SDC2P34741 201 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 HSPA13P48723 471 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 IZUMO4Q1ZYL8 232 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 SPSB3Q6PJ21 355 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 PLET1Q6UQ28 207 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 ZNF818PQ6ZRF7 136 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 RBPMS2Q6ZRY4 209 aaKnown RBP4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 LYG2Q86SG7 212 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 SLC38A6Q8IZM9 456 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 GDPD1Q8N9F7 314 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 OR10W1Q8NGF6 305 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 OR13F1Q8NGS4 319 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 OR5H6Q8NGV6 325 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 LGALS14Q8TCE9 139 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 CD300LFQ8TDQ1 290 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 SECTM1Q8WVN6 248 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 TMEM190Q8WZ59 177 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 BSCL2Q96G97 398 aaPredicted RBP4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 CNBD2Q96M20 576 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 CHRDL1Q9BU40 450 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 AUNIPQ9H7T9 357 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 NDUFA4L2Q9NRX3 87 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 RHBDL2Q9NX52 303 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 THYN1Q9P016 225 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 BLOC1S6Q9UL45 172 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 ANAPC10Q9UM13 185 aa4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 RRP15Q9Y3B9 282 aaKnown RBP4.67□□□□□ -1.66
PRPF40A-210ENST00000489741 TRAV18A0A075B6X5 111 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 OR2T8A6NH00 312 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 K7EIM0 57 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 PGLYRP1O75594 196 aaPredicted RBP4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 S1PR2O95136 353 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 CTSGP08311 255 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 TRAPPC2P0DI81 140 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 TRAPPC2BP0DI82 140 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 OR13C7P0DN81 318 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 APOC4P55056 127 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 GABARAPL2P60520 117 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 THOC7Q6I9Y2 204 aaKnown RBP4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 IZUMO2Q6UXV1 221 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 HSD17B13Q7Z5P4 300 aaPredicted RBP4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 OR5AP2Q8NGF4 316 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 OR10C1Q96KK4 312 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 YTHDF1Q9BYJ9 559 aaKnown RBP4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 COMMD5Q9GZQ3 224 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 SLC5A7Q9GZV3 580 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 RNF167Q9H6Y7 350 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 HRASLSQ9HDD0 168 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 DAZ1Q9NQZ3 744 aaKnown RBP4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 COMMD9Q9P000 198 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 SMPXQ9UHP9 88 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 RAB26Q9ULW5 256 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 ETV7Q9Y603 341 aa4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 F11RQ9Y624 299 aaKnown RBP4.66□□□□□ -1.66
PRPF40A-210ENST00000489741 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 C15orf62A8K5M9 175 aa4.65□□□□□ -1.67
PRPF40A-210ENST00000489741 CHEK1O14757 476 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 573.3 ms