RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 FAT2Q9NYQ8 4349 aa9.42□□□□□ -0.9
LTA-216ENST00000489638 IGHV4-28A0A0C4DH34 117 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 LOC100506127A0A0U1RQW1 187 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 GPR31O00270 319 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 ST8SIA3O43173 380 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 XRCC3O43542 346 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 GNG7O60262 68 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 DFFBO76075 338 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 PMP2P02689 132 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 CD5P06127 495 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 GIG44P09565 113 aaPredicted RBP9.41□□□□□ -0.9
LTA-216ENST00000489638 RBMY1A1P0DJD3 496 aaKnown RBP9.41□□□□□ -0.9
LTA-216ENST00000489638 RBMY1CP0DJD4 496 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 RBMY1FQ15415 496 aaKnown RBP9.41□□□□□ -0.9
LTA-216ENST00000489638 DHRS11Q6UWP2 260 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 ZNF114Q8NC26 417 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 OR5H2Q8NGV7 314 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 PINX1Q96BK5 328 aaKnown RBP9.41□□□□□ -0.9
LTA-216ENST00000489638 MS4A6AQ9H2W1 248 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 VSIRQ9H7M9 311 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 RAB26Q9ULW5 256 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 ANAPC10Q9UM13 185 aa9.41□□□□□ -0.9
LTA-216ENST00000489638 IGHV3-66A0A0C4DH42 116 aa9.4□□□□□ -0.9
LTA-216ENST00000489638 DNASE2O00115 360 aaPredicted RBP9.4□□□□□ -0.9
LTA-216ENST00000489638 APOHP02749 345 aaPredicted RBP9.4□□□□□ -0.9
LTA-216ENST00000489638 HLA-DMBP28068 263 aa9.4□□□□□ -0.9
LTA-216ENST00000489638 TAS2R46P59540 309 aa9.4□□□□□ -0.9
LTA-216ENST00000489638 PHLDA2Q53GA4 152 aa9.4□□□□□ -0.9
LTA-216ENST00000489638 TOMM20LQ6UXN7 152 aa9.4□□□□□ -0.9
LTA-216ENST00000489638 Q6ZTC4 211 aa9.4□□□□□ -0.9
LTA-216ENST00000489638 PKHD1P08F94 4074 aa9.4□□□□□ -0.91
LTA-216ENST00000489638 DNAH2Q9P225 4427 aa9.4□□□□□ -0.91
LTA-216ENST00000489638 IGHV4-4A0A075B6R2 117 aa9.39□□□□□ -0.91
LTA-216ENST00000489638 TRAV2A0A0B4J234 112 aa9.39□□□□□ -0.91
LTA-216ENST00000489638 RPL11P62913 178 aaKnown RBP9.39□□□□□ -0.91
LTA-216ENST00000489638 PRCDQ00LT1 54 aa9.39□□□□□ -0.91
LTA-216ENST00000489638 STHQ8IWL8 128 aa9.39□□□□□ -0.91
LTA-216ENST00000489638 OR4A16Q8NH70 328 aa9.39□□□□□ -0.91
LTA-216ENST00000489638 ZFAND3Q9H8U3 227 aa9.39□□□□□ -0.91
LTA-216ENST00000489638 RABAC1Q9UI14 185 aa9.39□□□□□ -0.91
LTA-216ENST00000489638 AGRNO00468 2067 aa9.39□□□□□ -0.91
LTA-216ENST00000489638 TRAV10A0A0B4J240 114 aa9.38□□□□□ -0.91
LTA-216ENST00000489638 ZNF705EA8MWA4 302 aaPredicted RBP9.38□□□□□ -0.91
LTA-216ENST00000489638 MED14OSP0DP75 135 aa9.38□□□□□ -0.91
LTA-216ENST00000489638 C4BPBP20851 252 aa9.38□□□□□ -0.91
LTA-216ENST00000489638 ZNF600Q6ZNG1 722 aa9.38□□□□□ -0.91
LTA-216ENST00000489638 H2BFWTQ7Z2G1 175 aa9.38□□□□□ -0.91
LTA-216ENST00000489638 TRPT1Q86TN4 253 aaKnown RBP9.38□□□□□ -0.91
LTA-216ENST00000489638 OR6F1Q8NGZ6 308 aa9.38□□□□□ -0.91
LTA-216ENST00000489638 SEC22AQ96IW7 307 aa9.38□□□□□ -0.91
LTA-216ENST00000489638 PUS1Q9Y606 427 aaKnown RBP eCLIP9.38□□□□□ -0.91
LTA-216ENST00000489638 X6R8D5 127 aa9.38□□□□□ -0.91
LTA-216ENST00000489638 DNAH17Q9UFH2 4485 aa9.38□□□□□ -0.91
LTA-216ENST00000489638 ABCA13Q86UQ4 5058 aa9.38□□□□□ -0.91
LTA-216ENST00000489638 DYNC1H1Q14204 4646 aaKnown RBP9.38□□□□□ -0.91
LTA-216ENST00000489638 ELOA3CA0A087WX78 387 aaPredicted RBP9.37□□□□□ -0.91
LTA-216ENST00000489638 IGKV1-39P01597 117 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 IGKV1D-39P04432 117 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 MIFP14174 115 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 NAT1P18440 290 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 S100GP29377 79 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 HRH1P35367 487 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 NPBWR1P48145 328 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 TAS2R20P59543 309 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 ERHP84090 104 aaKnown RBP9.37□□□□□ -0.91
LTA-216ENST00000489638 SPINK9Q5DT21 86 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 UBE2NLQ5JXB2 153 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 TMEM69Q5SWH9 247 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 TBC1D26Q86UD7 250 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 DUSP18Q8NEJ0 188 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 MRGPRFQ96AM1 343 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 S100A16Q96FQ6 103 aaKnown RBP9.37□□□□□ -0.91
LTA-216ENST00000489638 TMEM231Q9H6L2 316 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 FAM212BQ9NTI7 297 aaPredicted RBP9.37□□□□□ -0.91
LTA-216ENST00000489638 DNAH11Q96DT5 4516 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 A0A1B0GU03 582 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 AMBPP02760 352 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 HSPE1P61604 102 aaKnown RBP9.37□□□□□ -0.91
LTA-216ENST00000489638 TMEM41BQ5BJD5 291 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 STXBP6Q8NFX7 210 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 RNF126Q9BV68 326 aa9.37□□□□□ -0.91
LTA-216ENST00000489638 KNCNA6PVL3 124 aa9.36□□□□□ -0.91
LTA-216ENST00000489638 K7EQG2 157 aa9.36□□□□□ -0.91
LTA-216ENST00000489638 RTL8CO15255 209 aa9.36□□□□□ -0.91
LTA-216ENST00000489638 TMEM127O75204 238 aa9.36□□□□□ -0.91
LTA-216ENST00000489638 ZNF688P0C7X2 276 aa9.36□□□□□ -0.91
LTA-216ENST00000489638 SPP1P10451 314 aa9.36□□□□□ -0.91
LTA-216ENST00000489638 HLA-DMAP28067 261 aa9.36□□□□□ -0.91
LTA-216ENST00000489638 IZUMO4Q1ZYL8 232 aa9.36□□□□□ -0.91
LTA-216ENST00000489638 PVRIGQ6DKI7 326 aa9.36□□□□□ -0.91
LTA-216ENST00000489638 MORN3Q6PF18 240 aaPredicted RBP9.36□□□□□ -0.91
LTA-216ENST00000489638 CENPSQ8N2Z9 138 aa9.36□□□□□ -0.91
LTA-216ENST00000489638 SAMD12Q8N8I0 201 aa9.36□□□□□ -0.91
LTA-216ENST00000489638 CELA1Q9UNI1 258 aa9.36□□□□□ -0.91
LTA-216ENST00000489638 PRSS29PA6NIE9 313 aa9.35□□□□□ -0.91
LTA-216ENST00000489638 PRSS3P35030 304 aa9.35□□□□□ -0.91
LTA-216ENST00000489638 TSPAN5P62079 268 aa9.35□□□□□ -0.91
LTA-216ENST00000489638 NEDD8Q15843 81 aa9.35□□□□□ -0.91
LTA-216ENST00000489638 LPCAT3Q6P1A2 487 aa9.35□□□□□ -0.91
LTA-216ENST00000489638 LYSMD2Q8IV50 215 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms