RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 HOXA4Q00056 320 aaPredicted RBP5.14□□□□□ -1.59
SF3A3-208ENST00000489537 HABP2Q14520 560 aaPredicted RBP5.14□□□□□ -1.59
SF3A3-208ENST00000489537 PLGLAQ15195 96 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 AVPI1Q5T686 147 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 TPTE2P1Q5T6R2 138 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 CLEC9AQ6UXN8 241 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 PQLC2Q6ZP29 291 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 SLC35E3Q7Z769 313 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 PPP1R27Q86WC6 154 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 TEX29Q8N6K0 151 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 OR4P4Q8NGL7 312 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 OR1L4Q8NGR5 311 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 OR1P1Q8NH06 330 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 GATAD1Q8WUU5 269 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 NRGNQ92686 78 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 RPUSD4Q96CM3 377 aaKnown RBP5.14□□□□□ -1.59
SF3A3-208ENST00000489537 BSCL2Q96G97 398 aaPredicted RBP5.14□□□□□ -1.59
SF3A3-208ENST00000489537 CCL19Q99731 98 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 TCEAL7Q9BRU2 100 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 HINT2Q9BX68 163 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 MRPL32Q9BYC8 188 aaKnown RBP5.14□□□□□ -1.59
SF3A3-208ENST00000489537 TUBA4BQ9H853 241 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 SMCO4Q9NRQ5 59 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 RPRMQ9NS64 109 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 SLC45A2Q9UMX9 530 aa5.14□□□□□ -1.59
SF3A3-208ENST00000489537 HRNRQ86YZ3 2850 aaPredicted RBP5.14□□□□□ -1.59
SF3A3-208ENST00000489537 ANKRD17O75179 2603 aaKnown RBP5.14□□□□□ -1.59
SF3A3-208ENST00000489537 ANK3Q12955 4377 aaKnown RBP5.13□□□□□ -1.59
SF3A3-208ENST00000489537 HCFC1P51610 2035 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 MTORP42345 2549 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 IGHV2-70DA0A0C4DH43 119 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 MEX3AA1L020 520 aaKnown RBP5.13□□□□□ -1.59
SF3A3-208ENST00000489537 ODF3BA8MYP8 253 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 PRSS46E5RG02 174 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 F6UZH7 168 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 LY6LH3BQJ8 138 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 RRHO14718 337 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 AGPAT2O15120 278 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 NBR2O15453 112 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 TGOLN2O43493 480 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 CA2P00918 260 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 COX6B1P14854 86 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 SLC25A16P16260 332 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 HIST1H1BP16401 226 aaKnown RBP5.13□□□□□ -1.59
SF3A3-208ENST00000489537 B2MP61769 119 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 ARF6P62330 175 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 RUNX1Q01196 453 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 MEF2BQ02080 365 aaPredicted RBP5.13□□□□□ -1.59
SF3A3-208ENST00000489537 CD69Q07108 199 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 ARL16Q0P5N6 197 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 PRSS8Q16651 343 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 HAPLN4Q86UW8 402 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 VKORC1L1Q8N0U8 176 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 CLRN3Q8NCR9 226 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 NPBQ8NG41 125 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 CLDND2Q8NHS1 167 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 RCC1LQ96I51 464 aaKnown RBP5.13□□□□□ -1.59
SF3A3-208ENST00000489537 RSG1Q9BU20 258 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 SIRT7Q9NRC8 400 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 TMEM167BQ9NRX6 74 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 GAR1Q9NY12 217 aaKnown RBP5.13□□□□□ -1.59
SF3A3-208ENST00000489537 TECRQ9NZ01 308 aaKnown RBP5.13□□□□□ -1.59
SF3A3-208ENST00000489537 SIGLEC9Q9Y336 463 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 LSM4Q9Y4Z0 139 aaKnown RBP5.13□□□□□ -1.59
SF3A3-208ENST00000489537 PXMP4Q9Y6I8 212 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 PRR14LQ5THK1 2151 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 DSCAMO60469 2012 aa5.13□□□□□ -1.59
SF3A3-208ENST00000489537 PRRC2AP48634 2157 aaKnown RBP5.12□□□□□ -1.59
SF3A3-208ENST00000489537 MED13LQ71F56 2210 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 TRAV30A0A087WSZ9 112 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 A0A087WWC5 75 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 LOC102723971A0A1B0GUV8 181 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 SRRM4A7MD48 611 aaKnown RBP5.12□□□□□ -1.59
SF3A3-208ENST00000489537 C22orf46C9J442 243 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 LYNX1G3V0Z9 82 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 SLC25A17O43808 307 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 TOX4O94842 621 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 NDUFA3O95167 84 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 VENTXO95231 258 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 IGLV2-23P01705 113 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 OR13C7P0DN81 318 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 LYNX1P0DP58 116 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 RNASE2P10153 161 aaKnown RBP5.12□□□□□ -1.59
SF3A3-208ENST00000489537 COX7A1P24310 79 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 FHITP49789 147 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 ELLP55199 621 aaPredicted RBP5.12□□□□□ -1.59
SF3A3-208ENST00000489537 RPL19P84098 196 aaKnown RBP5.12□□□□□ -1.59
SF3A3-208ENST00000489537 EBI3Q14213 229 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 PSG5Q15238 335 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 FAM53AQ6NSI3 398 aaPredicted RBP5.12□□□□□ -1.59
SF3A3-208ENST00000489537 SPSB3Q6PJ21 355 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 SLC16A13Q7RTY0 426 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 RPP25LQ8N5L8 163 aaKnown RBP5.12□□□□□ -1.59
SF3A3-208ENST00000489537 C15orf54Q8N8G6 183 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 TMEM116Q8NCL8 245 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 RAB24Q969Q5 203 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 UHRF2Q96PU4 802 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 CTDSP1Q9GZU7 261 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 NARFLQ9H6Q4 476 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms