RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 CENPSQ8N2Z9 138 aa11.98□□□□□ -0.49
LMX1A-204ENST00000489443 PINX1Q96BK5 328 aaKnown RBP11.98□□□□□ -0.49
LMX1A-204ENST00000489443 A0A0B4J2A0 478 aa11.97□□□□□ -0.49
LMX1A-204ENST00000489443 LGALS9O00182 355 aa11.97□□□□□ -0.49
LMX1A-204ENST00000489443 NXPH3O95157 252 aa11.97□□□□□ -0.49
LMX1A-204ENST00000489443 IGHV3-48P01763 117 aa11.97□□□□□ -0.49
LMX1A-204ENST00000489443 GP9P14770 177 aa11.97□□□□□ -0.49
LMX1A-204ENST00000489443 SUB1P53999 127 aaKnown RBP eCLIP11.97□□□□□ -0.49
LMX1A-204ENST00000489443 DCTN2Q13561 401 aaKnown RBP11.97□□□□□ -0.49
LMX1A-204ENST00000489443 BSCL2Q96G97 398 aaPredicted RBP11.97□□□□□ -0.49
LMX1A-204ENST00000489443 SIGLEC8Q9NYZ4 499 aa11.97□□□□□ -0.49
LMX1A-204ENST00000489443 SHPKQ9UHJ6 478 aa11.97□□□□□ -0.49
LMX1A-204ENST00000489443 C2orf70A6NJV1 201 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 CEBPZOSA8MTT3 80 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 INS-IGF2F8WCM5 200 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 I3L2K1 104 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 MT-CO2P00403 227 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 FOLR2P14207 255 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 EDN2P20800 178 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 MFAP4P55083 255 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 PPP1R1AQ13522 171 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 AARDQ4LEZ3 155 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 SPSB3Q6PJ21 355 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 ADAMTSL5Q6ZMM2 481 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 OR52E5Q8NH55 327 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 DYNLRB2Q8TF09 96 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 C7orf50Q9BRJ6 194 aaKnown RBP11.96□□□□□ -0.49
LMX1A-204ENST00000489443 CHRDL1Q9BU40 450 aa11.96□□□□□ -0.49
LMX1A-204ENST00000489443 HEYLQ9NQ87 328 aaPredicted RBP11.96□□□□□ -0.49
LMX1A-204ENST00000489443 LSM4Q9Y4Z0 139 aaKnown RBP11.96□□□□□ -0.49
LMX1A-204ENST00000489443 F8W735 103 aaPredicted RBP11.95□□□□□ -0.5
LMX1A-204ENST00000489443 NDUFB6O95139 128 aa11.95□□□□□ -0.5
LMX1A-204ENST00000489443 SFT2D2O95562 160 aa11.95□□□□□ -0.5
LMX1A-204ENST00000489443 RNASE2P10153 161 aaKnown RBP11.95□□□□□ -0.5
LMX1A-204ENST00000489443 SMCO1Q147U7 214 aa11.95□□□□□ -0.5
LMX1A-204ENST00000489443 ANKRD55Q3KP44 614 aa11.95□□□□□ -0.5
LMX1A-204ENST00000489443 TM4SF20Q53R12 229 aa11.95□□□□□ -0.5
LMX1A-204ENST00000489443 NMSQ5H8A3 153 aa11.95□□□□□ -0.5
LMX1A-204ENST00000489443 UNQ9165/PRO28630Q6UXU0 137 aa11.95□□□□□ -0.5
LMX1A-204ENST00000489443 CACNG8Q8WXS5 425 aa11.95□□□□□ -0.5
LMX1A-204ENST00000489443 ATP6V0BQ99437 205 aa11.95□□□□□ -0.5
LMX1A-204ENST00000489443 FLVCR2Q9UPI3 526 aa11.95□□□□□ -0.5
LMX1A-204ENST00000489443 SELENOKQ9Y6D0 94 aa11.95□□□□□ -0.5
LMX1A-204ENST00000489443 PIGBOS1A0A0B4J2F0 54 aa11.94□□□□□ -0.5
LMX1A-204ENST00000489443 IZUMO1RA6ND01 250 aa11.94□□□□□ -0.5
LMX1A-204ENST00000489443 CBLN1P23435 193 aa11.94□□□□□ -0.5
LMX1A-204ENST00000489443 BTCP35070 178 aa11.94□□□□□ -0.5
LMX1A-204ENST00000489443 ADMP35318 185 aa11.94□□□□□ -0.5
LMX1A-204ENST00000489443 CD69Q07108 199 aa11.94□□□□□ -0.5
LMX1A-204ENST00000489443 PALMDQ9NP74 551 aa11.94□□□□□ -0.5
LMX1A-204ENST00000489443 TMEM213A2RRL7 107 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 A8MWP6 167 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 PLA2G10O15496 165 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 CTSGP08311 255 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 HTR2BP41595 481 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 UBE2MP61081 183 aaKnown RBP11.93□□□□□ -0.5
LMX1A-204ENST00000489443 DEFB114Q30KQ6 69 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 CD300EQ496F6 205 aaPredicted RBP11.93□□□□□ -0.5
LMX1A-204ENST00000489443 LCN12Q6JVE5 192 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 LINC00299Q6ZSB3 139 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 UXS1Q8NBZ7 420 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 OR1S1Q8NH92 325 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 TXN2Q99757 166 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 ZNF436Q9C0F3 470 aaPredicted RBP11.93□□□□□ -0.5
LMX1A-204ENST00000489443 GAR1Q9NY12 217 aaKnown RBP11.93□□□□□ -0.5
LMX1A-204ENST00000489443 CACFD1Q9UGQ2 172 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 UFC1Q9Y3C8 167 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 SMAD5-AS1Q9Y6J3 95 aa11.93□□□□□ -0.5
LMX1A-204ENST00000489443 IGHV3OR16-8A0A075B7F1 116 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 A0A1B0GU03 582 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 DUXBA0A1W2PPF3 345 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 NUPL2O15504 423 aaKnown RBP11.92□□□□□ -0.5
LMX1A-204ENST00000489443 LYRM1O43325 122 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 GNG7O60262 68 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 TNFRSF9Q07011 255 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 PVRIGQ6DKI7 326 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 C11orf87Q6NUJ2 197 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 LRTM2Q8N967 370 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 DUSP18Q8NEJ0 188 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 S100ZQ8WXG8 99 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 B9D2Q9BPU9 175 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 C20orf24Q9BUV8 137 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 CCDC32Q9BV29 185 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 HIPK2Q9H2X6 1198 aa11.92□□□□□ -0.5
LMX1A-204ENST00000489443 C9orf170A2RU37 121 aa11.91□□□□□ -0.5
LMX1A-204ENST00000489443 CORTO00230 105 aa11.91□□□□□ -0.5
LMX1A-204ENST00000489443 NDUFA4O00483 81 aa11.91□□□□□ -0.5
LMX1A-204ENST00000489443 HOXB5P09067 269 aa11.91□□□□□ -0.5
LMX1A-204ENST00000489443 ANXA7P20073 488 aaKnown RBP11.91□□□□□ -0.5
LMX1A-204ENST00000489443 FCGR2BP31994 310 aaPredicted RBP11.91□□□□□ -0.5
LMX1A-204ENST00000489443 OPRK1P41145 380 aa11.91□□□□□ -0.5
LMX1A-204ENST00000489443 NPBWR1P48145 328 aa11.91□□□□□ -0.5
LMX1A-204ENST00000489443 MLANAQ16655 118 aa11.91□□□□□ -0.5
LMX1A-204ENST00000489443 BSXQ3C1V8 233 aa11.91□□□□□ -0.5
LMX1A-204ENST00000489443 OR2K2Q8NGT1 345 aa11.91□□□□□ -0.5
LMX1A-204ENST00000489443 TMEM190Q8WZ59 177 aa11.91□□□□□ -0.5
LMX1A-204ENST00000489443 RBKSQ9H477 322 aa11.91□□□□□ -0.5
LMX1A-204ENST00000489443 TECRQ9NZ01 308 aaKnown RBP11.91□□□□□ -0.5
LMX1A-204ENST00000489443 PTTG2Q9NZH5 202 aa11.91□□□□□ -0.5
LMX1A-204ENST00000489443 HSPB7Q9UBY9 170 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms