RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SPCS1Q9Y6A9 102 aa14.72□□□□□ -0.05
NPHP4-209ENST00000489180 LHX2P50458 406 aa14.72□□□□□ -0.05
NPHP4-209ENST00000489180 PRR31Q5SQ13 230 aa14.72□□□□□ -0.05
NPHP4-209ENST00000489180 ZNF497Q6ZNH5 498 aa14.72□□□□□ -0.05
NPHP4-209ENST00000489180 PRDM13Q9H4Q3 707 aa14.72□□□□□ -0.05
NPHP4-209ENST00000489180 GP6Q9HCN6 339 aa14.72□□□□□ -0.05
NPHP4-209ENST00000489180 CD24P25063 80 aa14.72□□□□□ -0.05
NPHP4-209ENST00000489180 MRPL14Q6P1L8 145 aaKnown RBP14.72□□□□□ -0.05
NPHP4-209ENST00000489180 TNFRSF18Q9Y5U5 241 aa14.72□□□□□ -0.05
NPHP4-209ENST00000489180 OR9G9P0C7N8 305 aa14.72□□□□□ -0.05
NPHP4-209ENST00000489180 UPK2O00526 184 aa14.71□□□□□ -0.05
NPHP4-209ENST00000489180 EFEMP2O95967 443 aa14.71□□□□□ -0.05
NPHP4-209ENST00000489180 ZCCHC24Q8N2G6 241 aaKnown RBP14.71□□□□□ -0.05
NPHP4-209ENST00000489180 RNASEH2CQ8TDP1 164 aaKnown RBP14.71□□□□□ -0.05
NPHP4-209ENST00000489180 CHD5Q8TDI0 1954 aa14.71□□□□□ -0.05
NPHP4-209ENST00000489180 SNRNP200O75643 2136 aaKnown RBP14.71□□□□□ -0.05
NPHP4-209ENST00000489180 FOXH1O75593 365 aa14.71□□□□□ -0.05
NPHP4-209ENST00000489180 SFTA2Q6UW10 78 aa14.71□□□□□ -0.05
NPHP4-209ENST00000489180 ORMDL3Q8N138 153 aa14.71□□□□□ -0.05
NPHP4-209ENST00000489180 FOXD3Q9UJU5 478 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-209ENST00000489180 DOCK3Q8IZD9 2030 aa14.71□□□□□ -0.05
NPHP4-209ENST00000489180 H3BUT2 72 aa14.71□□□□□ -0.06
NPHP4-209ENST00000489180 IGHV3-11P01762 117 aa14.71□□□□□ -0.06
NPHP4-209ENST00000489180 CCL1P22362 96 aa14.71□□□□□ -0.06
NPHP4-209ENST00000489180 COPS9Q8WXC6 57 aa14.71□□□□□ -0.06
NPHP4-209ENST00000489180 LAMTOR2Q9Y2Q5 125 aa14.71□□□□□ -0.06
NPHP4-209ENST00000489180 C15orf61A6NNL5 157 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 GFI1BQ5VTD9 330 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 TMEM144Q7Z5S9 345 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 OCC1Q8TAD7 63 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 LINC00312Q9Y6C7 94 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 ICE1Q9Y2F5 2266 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 NYNRINQ9P2P1 1898 aaKnown RBP14.7□□□□□ -0.06
NPHP4-209ENST00000489180 DNAL4O96015 105 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 MORN2Q502X0 79 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 GLMPQ8WWB7 406 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 CACNG8Q8WXS5 425 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 NUDT11Q96G61 164 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 GDF15Q99988 308 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 FAM186AA6NE01 2351 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 ATP5LO75964 103 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 CA1P00915 261 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-209ENST00000489180 CIARTQ8N365 385 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-209ENST00000489180 FAM89BQ8N5H3 189 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 SOX21Q9Y651 276 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-209ENST00000489180 TRAV9-1A0A075B6T8 112 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 PAPPA-AS1Q5QFB9 102 aa14.7□□□□□ -0.06
NPHP4-209ENST00000489180 MEF2CQ06413 473 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-209ENST00000489180 BRCA1P38398 1863 aaKnown RBP14.69□□□□□ -0.06
NPHP4-209ENST00000489180 PSME4Q14997 1843 aa14.69□□□□□ -0.06
NPHP4-209ENST00000489180 PLXNA1Q9UIW2 1896 aa14.69□□□□□ -0.06
NPHP4-209ENST00000489180 CXCL1P09341 107 aa14.69□□□□□ -0.06
NPHP4-209ENST00000489180 C1orf162Q8NEQ5 155 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-209ENST00000489180 SEMA5BQ9P283 1151 aa14.69□□□□□ -0.06
NPHP4-209ENST00000489180 PINLYPA6NC86 204 aa14.69□□□□□ -0.06
NPHP4-209ENST00000489180 NEUROG1Q92886 237 aa14.69□□□□□ -0.06
NPHP4-209ENST00000489180 FBLN5Q9UBX5 448 aa14.69□□□□□ -0.06
NPHP4-209ENST00000489180 SCN10AQ9Y5Y9 1956 aa14.69□□□□□ -0.06
NPHP4-209ENST00000489180 SMAD7O15105 426 aaKnown RBP14.69□□□□□ -0.06
NPHP4-209ENST00000489180 ITLN2Q8WWU7 325 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-209ENST00000489180 ALKBH7Q9BT30 221 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-209ENST00000489180 TAF1LQ8IZX4 1826 aa14.69□□□□□ -0.06
NPHP4-209ENST00000489180 IGKV1-12A0A0C4DH73 117 aa14.68□□□□□ -0.06
NPHP4-209ENST00000489180 IGKV1D-12P01611 117 aa14.68□□□□□ -0.06
NPHP4-209ENST00000489180 OTORQ9NRC9 128 aa14.68□□□□□ -0.06
NPHP4-209ENST00000489180 ID3Q02535 119 aa14.68□□□□□ -0.06
NPHP4-209ENST00000489180 DUX3Q96PT4 197 aa14.68□□□□□ -0.06
NPHP4-209ENST00000489180 RFNGQ9Y644 331 aa14.68□□□□□ -0.06
NPHP4-209ENST00000489180 GREB1LQ9C091 1923 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-209ENST00000489180 PPIFP30405 207 aaKnown RBP14.68□□□□□ -0.06
NPHP4-209ENST00000489180 C17orf100A8MU93 164 aa14.68□□□□□ -0.06
NPHP4-209ENST00000489180 UBE2CO00762 179 aa14.68□□□□□ -0.06
NPHP4-209ENST00000489180 LINC00614P0C842 121 aa14.68□□□□□ -0.06
NPHP4-209ENST00000489180 MST1P26927 711 aa14.68□□□□□ -0.06
NPHP4-209ENST00000489180 HEPN1Q6WQI6 88 aa14.68□□□□□ -0.06
NPHP4-209ENST00000489180 FNDC4Q9H6D8 234 aaPredicted RBP14.68□□□□□ -0.06
NPHP4-209ENST00000489180 YPEL1O60688 119 aa14.67□□□□□ -0.06
NPHP4-209ENST00000489180 YPEL2Q96QA6 119 aa14.67□□□□□ -0.06
NPHP4-209ENST00000489180 NDUFAF3Q9BU61 184 aa14.67□□□□□ -0.06
NPHP4-209ENST00000489180 SIPA1L1O43166 1804 aa14.67□□□□□ -0.06
NPHP4-209ENST00000489180 LINC00271P0C7V0 271 aa14.67□□□□□ -0.06
NPHP4-209ENST00000489180 TRAV5A0A0B4J249 113 aa14.67□□□□□ -0.06
NPHP4-209ENST00000489180 EFNB3Q15768 340 aa14.67□□□□□ -0.06
NPHP4-209ENST00000489180 KIR3DL3Q8N743 410 aa14.67□□□□□ -0.06
NPHP4-209ENST00000489180 IGKV3D-20A0A0C4DH25 116 aa14.67□□□□□ -0.06
NPHP4-209ENST00000489180 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.67□□□□□ -0.06
NPHP4-209ENST00000489180 TMEM50AO95807 157 aa14.67□□□□□ -0.06
NPHP4-209ENST00000489180 RTN4RL2Q86UN3 420 aa14.67□□□□□ -0.06
NPHP4-209ENST00000489180 EPDR1Q9UM22 224 aa14.67□□□□□ -0.06
NPHP4-209ENST00000489180 ABHD17AQ96GS6 310 aa14.67□□□□□ -0.06
NPHP4-209ENST00000489180 MRPS16Q9Y3D3 137 aaKnown RBP14.66□□□□□ -0.06
NPHP4-209ENST00000489180 FAM90A1Q86YD7 464 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 C10orf126Q8N4M7 172 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 CYTL1Q9NRR1 136 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 JKAMPQ9P055 326 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 PDCD11Q14690 1871 aaKnown RBP14.66□□□□□ -0.06
NPHP4-209ENST00000489180 A6NNC1 897 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 LYNX1G3V0Z9 82 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 LYNX1P0DP58 116 aa14.66□□□□□ -0.06
NPHP4-209ENST00000489180 LTBRP36941 435 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms