RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 LRRC10Q5BKY1 277 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 SOHLH1Q5JUK2 328 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 C10orf91Q5T1B1 145 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 NCR3LG1Q68D85 454 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 LCN15Q6UWW0 184 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 SSX8Q7RTT4 187 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 ZNF525Q8N782 197 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 FAM216BQ8N7L0 139 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 OR10G4Q8NGN3 311 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 OR10G9Q8NGN4 311 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 OR10G7Q8NGN6 311 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 OR4S2Q8NH73 311 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 LYPD6BQ8NI32 183 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 RXFP4Q8TDU9 374 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 CCL17Q92583 94 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 LEAP2Q969E1 77 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 RAB39BQ96DA2 213 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 MRPL53Q96EL3 112 aaKnown RBP2.29□□□□□ -2.04
CALD1-221ENST00000489019 ADTRPQ96IZ2 230 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 SGK494Q96LW2 274 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 GAFA1Q96PS6 74 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 RARRES2Q99969 163 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 PSMG3Q9BT73 122 aaPredicted RBP2.29□□□□□ -2.04
CALD1-221ENST00000489019 RSG1Q9BU20 258 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 C20orf24Q9BUV8 137 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 TMEM147Q9BVK8 224 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 PARD6GQ9BYG4 376 aaPredicted RBP2.29□□□□□ -2.04
CALD1-221ENST00000489019 WDR61Q9GZS3 305 aaKnown RBP2.29□□□□□ -2.04
CALD1-221ENST00000489019 TOLLIPQ9H0E2 274 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 SLC35B3Q9H1N7 401 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 VCX2Q9H322 139 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 GAL3ST2Q9H3Q3 398 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 SMDT1Q9H4I9 107 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 SMCO4Q9NRQ5 59 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 COA4Q9NYJ1 87 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 GNG13Q9P2W3 67 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 RNF115Q9Y4L5 304 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 PPIAL4AQ9Y536 164 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 RFNGQ9Y644 331 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 MED13Q9UHV7 2174 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 USP34Q70CQ2 3546 aa2.29□□□□□ -2.04
CALD1-221ENST00000489019 A0A1B0GW64 132 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 A0A1W2PPV4 95 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 C7orf77A4D0Y5 90 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 MAP1LC3B2A6NCE7 125 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 C1orf196B1AJZ1 125 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 C9JQL5 133 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 CCL21O00585 134 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 ITGB1BP1O14713 200 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 SLC31A2O15432 143 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 ZNF737O75373 536 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 HRASP01112 189 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 LHBP01229 141 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 APOA2P02652 100 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 HSPB1P04792 205 aaKnown RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 IFNA4P05014 189 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 S100A6P06703 90 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 CD55P08174 381 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 SRP19P09132 144 aaKnown RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 FBP1P09467 338 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 SAA2P0DJI9 122 aaPredicted RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 SFTPCP11686 197 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 IL3RAP26951 378 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 CDC34P49427 236 aaPredicted RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 PSMB3P49720 205 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 FGF8P55075 233 aaPredicted RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 SPCS3P61009 180 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 RAB5BP61020 215 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 GNB2P62879 340 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 RPL31P62899 125 aaKnown RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 CCL20P78556 96 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 FLI1Q01543 452 aaPredicted RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 PAX5Q02548 391 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 MEF2CQ06413 473 aaPredicted RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 TFF3Q07654 80 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 KLRB1Q12918 225 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 EIF4EBP1Q13541 118 aaPredicted RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 RHEBQ15382 184 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 RTL8BQ17RB0 113 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 C17orf58Q2M2W7 97 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 PDLIM3Q53GG5 364 aaPredicted RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 KHDC3LQ587J8 217 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 CT45A1Q5HYN5 189 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 ZNF506Q5JVG8 444 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 FFAR4Q5NUL3 377 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 NCMAPQ5T1S8 102 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 AVPI1Q5T686 147 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 ZC2HC1BQ5TFG8 222 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 TEX36Q5VZQ5 186 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 STUMQ69YW2 141 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 MYO7BQ6PIF6 2116 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 DUX4L9Q6RFH8 374 aaPredicted RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 TMEM14EPQ6UXP3 125 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 ZNF429Q86V71 674 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 MED12LQ86YW9 2145 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 VKORC1L1Q8N0U8 176 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 ZFP82Q8N141 532 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 ZCCHC24Q8N2G6 241 aaKnown RBP2.28□□□□□ -2.04
CALD1-221ENST00000489019 C15orf54Q8N8G6 183 aa2.28□□□□□ -2.04
CALD1-221ENST00000489019 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms