RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 TRAPPC2P0DI81 140 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 TRAPPC2BP0DI82 140 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 APELAP0DMC3 54 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 CTRB1P17538 263 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 HOXD3P31249 432 aaPredicted RBP3.92□□□□□ -1.78
SF3A3-207ENST00000488934 LPAR6P43657 344 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 AKR1C2P52895 323 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 PPP5CP53041 499 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 BRWD1-AS2P59051 145 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 OR2B8PP59922 312 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 EXOSC2Q13868 293 aaKnown RBP3.92□□□□□ -1.78
SF3A3-207ENST00000488934 MRGPRG-AS1Q2M3A8 158 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 TRIM16LQ309B1 348 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 C15orf32Q32M92 178 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 SPANXN2Q5MJ10 180 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 C10orf55Q5SWW7 151 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 CTRB2Q6GPI1 263 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 ACSM6Q6P461 480 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 FAM219AQ8IW50 185 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 OR9G4Q8NGQ1 327 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 OR1L8Q8NGR8 309 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 OR4A16Q8NH70 328 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 RNASE11Q8TAA1 199 aaKnown RBP3.92□□□□□ -1.78
SF3A3-207ENST00000488934 CASTOR1Q8WTX7 329 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 DCUN1D4Q92564 292 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 ATP6V0BQ99437 205 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 NXF2Q9GZY0 626 aaKnown RBP3.92□□□□□ -1.78
SF3A3-207ENST00000488934 MIXL1Q9H2W2 232 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 SLC2A8Q9NY64 477 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 ZNF256Q9Y2P7 627 aaPredicted RBP3.92□□□□□ -1.78
SF3A3-207ENST00000488934 CEPT1Q9Y6K0 416 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 SORL1Q92673 2214 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 CMYA5Q8N3K9 4069 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 NOTCH1P46531 2555 aa3.92□□□□□ -1.78
SF3A3-207ENST00000488934 VWFP04275 2813 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.91□□□□□ -1.78
SF3A3-207ENST00000488934 TEX13DA0A0J9YY54 714 aaPredicted RBP3.91□□□□□ -1.78
SF3A3-207ENST00000488934 C3orf85A0A1B0GTC6 90 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 IGLC7A0M8Q6 106 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 ANKRD20A5PA0PJZ0 165 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 HMX3A6NHT5 357 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 CORTO00230 105 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 GGCTO75223 188 aaKnown RBP3.91□□□□□ -1.78
SF3A3-207ENST00000488934 SCGB2A1O75556 95 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 OR2J3O76001 311 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 CTSDP07339 412 aaPredicted RBP3.91□□□□□ -1.78
SF3A3-207ENST00000488934 ANXA3P12429 323 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 TNFSF8P32971 234 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 G6PCP35575 357 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 INPP1P49441 399 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 PRCDQ00LT1 54 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 DHODHQ02127 395 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 KLF5Q13887 457 aaPredicted RBP3.91□□□□□ -1.78
SF3A3-207ENST00000488934 KLK9Q2XQG4 91 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 ZNF585BQ52M93 769 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 DEFB121Q5J5C9 76 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 LCN12Q6JVE5 192 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 CCDC28AQ8IWP9 274 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 TOMM5Q8N4H5 51 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 GDPD1Q8N9F7 314 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 OR4C16Q8NGL9 310 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 OR13C8Q8NGS7 320 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 OR2K2Q8NGT1 345 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 DLX4Q92988 240 aaPredicted RBP3.91□□□□□ -1.78
SF3A3-207ENST00000488934 MRGPRFQ96AM1 343 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 RRNAD1Q96FB5 475 aaKnown RBP3.91□□□□□ -1.78
SF3A3-207ENST00000488934 ALX4Q9H161 411 aaPredicted RBP3.91□□□□□ -1.78
SF3A3-207ENST00000488934 TMEM14BQ9NUH8 114 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 MCUBQ9NWR8 336 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 SIGLEC8Q9NYZ4 499 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 KLK9Q9UKQ9 250 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 KCNIP3Q9Y2W7 256 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 OR51B2Q9Y5P1 312 aa3.91□□□□□ -1.78
SF3A3-207ENST00000488934 IGLV11-55A0A075B6I3 123 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 TEX50A0A1B0GTY4 177 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 LGALS9O00182 355 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 IFNA17P01571 189 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 PRB2P02812 416 aaPredicted RBP3.9□□□□□ -1.79
SF3A3-207ENST00000488934 OR13C7P0DN81 318 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 AREGP15514 252 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 UCP1P25874 307 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 ARL3P36405 182 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 SNCAP37840 140 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 ETV6P41212 452 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 SUB1P53999 127 aaKnown RBP eCLIP3.9□□□□□ -1.79
SF3A3-207ENST00000488934 SYNJ2BPP57105 145 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 SRPXP78539 464 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 ERHP84090 104 aaKnown RBP3.9□□□□□ -1.79
SF3A3-207ENST00000488934 ZNF45Q02386 682 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 FAM106AQ4KMX7 169 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 PYDC2Q56P42 97 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 SLC25A24Q6NUK1 477 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 SPSB3Q6PJ21 355 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 GTSCR1Q86UQ5 136 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 SGPP2Q8IWX5 399 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 Q8N402 240 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 SLC35G3Q8N808 338 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 ZNF114Q8NC26 417 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 OR4D10Q8NGI6 311 aa3.9□□□□□ -1.79
SF3A3-207ENST00000488934 OR51S1Q8NGJ8 323 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms