RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, human

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG9A-222	ENST00000488833	TFPI2	P48307	235 aa		13.54	□□□□□ -0.24
ATG9A-222	ENST00000488833	RND3	P61587	244 aa		13.54	□□□□□ -0.24
ATG9A-222	ENST00000488833	ERH	P84090	104 aa	Known RBP	13.54	□□□□□ -0.24
ATG9A-222	ENST00000488833	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
ATG9A-222	ENST00000488833	TNFRSF9	Q07011	255 aa		13.54	□□□□□ -0.24
ATG9A-222	ENST00000488833	RNASE10	Q5GAN6	216 aa	Known RBP	13.54	□□□□□ -0.24
ATG9A-222	ENST00000488833	RNF183	Q96D59	192 aa		13.54	□□□□□ -0.24
ATG9A-222	ENST00000488833	OR10C1	Q96KK4	312 aa		13.54	□□□□□ -0.24
ATG9A-222	ENST00000488833	NXF2	Q9GZY0	626 aa	Known RBP	13.54	□□□□□ -0.24
ATG9A-222	ENST00000488833	IGHV3OR16-13	A0A075B7E8	117 aa		13.53	□□□□□ -0.24
ATG9A-222	ENST00000488833	IGHV3-74	A0A0B4J1X5	117 aa		13.53	□□□□□ -0.24
ATG9A-222	ENST00000488833	AKR1C2	P52895	323 aa		13.53	□□□□□ -0.24
ATG9A-222	ENST00000488833	PIGP	P57054	158 aa		13.53	□□□□□ -0.24
ATG9A-222	ENST00000488833	APRG1	Q8IVJ8	170 aa		13.53	□□□□□ -0.24
ATG9A-222	ENST00000488833	SLC35G3	Q8N808	338 aa		13.53	□□□□□ -0.24
ATG9A-222	ENST00000488833	ZNF486	Q96H40	463 aa	Predicted RBP	13.53	□□□□□ -0.24
ATG9A-222	ENST00000488833	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.53	□□□□□ -0.24
ATG9A-222	ENST00000488833	KLK11	Q9UBX7	282 aa		13.53	□□□□□ -0.24
ATG9A-222	ENST00000488833	TRAV14DV4	A0A0A6YYC5	116 aa		13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	NUPR2	A6NF83	97 aa		13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	IGKV1-5	P01602	117 aa		13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	CD3D	P04234	171 aa		13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	PPP5C	P53041	499 aa		13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	ZNF124	Q15973	351 aa		13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	LHFPL1	Q86WI0	220 aa		13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	OR52I2	Q8NH67	350 aa		13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	LINC00476	Q8WZB0	136 aa		13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	AP3S1	Q92572	193 aa		13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	TP53RK	Q96S44	253 aa		13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	GINS3	Q9BRX5	216 aa		13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	NAA50	Q9GZZ1	169 aa	Known RBP	13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	MAP6D1	Q9H9H5	199 aa		13.52	□□□□□ -0.25
ATG9A-222	ENST00000488833	SNCA	P37840	140 aa		13.51	□□□□□ -0.25
ATG9A-222	ENST00000488833	NPBWR1	P48145	328 aa		13.51	□□□□□ -0.25
ATG9A-222	ENST00000488833	GBGT1	Q8N5D6	347 aa		13.51	□□□□□ -0.25
ATG9A-222	ENST00000488833	ARRDC1	Q8N5I2	433 aa		13.51	□□□□□ -0.25
ATG9A-222	ENST00000488833	EXTL2	Q9UBQ6	330 aa		13.51	□□□□□ -0.25
ATG9A-222	ENST00000488833	ST8SIA3	O43173	380 aa		13.5	□□□□□ -0.25
ATG9A-222	ENST00000488833	ATG12	O94817	140 aa		13.5	□□□□□ -0.25
ATG9A-222	ENST00000488833	IFNA17	P01571	189 aa		13.5	□□□□□ -0.25
ATG9A-222	ENST00000488833		P0C879	139 aa		13.5	□□□□□ -0.25
ATG9A-222	ENST00000488833	TBP	P20226	339 aa		13.5	□□□□□ -0.25
ATG9A-222	ENST00000488833	HOXA1	P49639	335 aa	Predicted RBP	13.5	□□□□□ -0.25
ATG9A-222	ENST00000488833	CMC4	P56277	68 aa	Predicted RBP	13.5	□□□□□ -0.25
ATG9A-222	ENST00000488833	TRIM16L	Q309B1	348 aa		13.5	□□□□□ -0.25
ATG9A-222	ENST00000488833	TOMM20L	Q6UXN7	152 aa		13.5	□□□□□ -0.25
ATG9A-222	ENST00000488833	TCF24	Q7RTU0	167 aa		13.5	□□□□□ -0.25
ATG9A-222	ENST00000488833	DUSP18	Q8NEJ0	188 aa		13.5	□□□□□ -0.25
ATG9A-222	ENST00000488833	PDCD10	Q9BUL8	212 aa		13.5	□□□□□ -0.25
ATG9A-222	ENST00000488833	COPZ2	Q9P299	210 aa		13.5	□□□□□ -0.25
ATG9A-222	ENST00000488833		A0A0B4J293	547 aa		13.49	□□□□□ -0.25
ATG9A-222	ENST00000488833	C3orf85	A0A1B0GTC6	90 aa		13.49	□□□□□ -0.25
ATG9A-222	ENST00000488833	GABARAP	O95166	117 aa		13.49	□□□□□ -0.25
ATG9A-222	ENST00000488833	LY6G6C	O95867	125 aa		13.49	□□□□□ -0.25
ATG9A-222	ENST00000488833	ZNF182	P17025	639 aa	Predicted RBP	13.49	□□□□□ -0.25
ATG9A-222	ENST00000488833	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.49	□□□□□ -0.25
ATG9A-222	ENST00000488833	TMEM217	Q8N7C4	229 aa		13.49	□□□□□ -0.25
ATG9A-222	ENST00000488833	CCDC71L	Q8N9Z2	235 aa		13.49	□□□□□ -0.25
ATG9A-222	ENST00000488833	ST8SIA2	Q92186	375 aa		13.49	□□□□□ -0.25
ATG9A-222	ENST00000488833	MTFP1	Q9UDX5	166 aa		13.49	□□□□□ -0.25
ATG9A-222	ENST00000488833	INS-IGF2	F8WCM5	200 aa		13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	ATF4	P18848	351 aa	Predicted RBP	13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	PAFAH1B2	P68402	229 aa		13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	CTF1	Q16619	201 aa		13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	SP6	Q3SY56	376 aa		13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	SCGB2B2	Q4G0G5	96 aa		13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	FAM90A2P	Q658T7	463 aa		13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	ZNF600	Q6ZNG1	722 aa		13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	OR4D10	Q8NGI6	311 aa		13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	RNASE11	Q8TAA1	199 aa	Known RBP	13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	ZFAND1	Q8TCF1	268 aa		13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	ABHD1	Q96SE0	405 aa		13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	CSTL1	Q9H114	145 aa		13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	ENY2	Q9NPA8	101 aa		13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
ATG9A-222	ENST00000488833	IGHV3-66	A0A0C4DH42	116 aa		13.47	□□□□□ -0.25
ATG9A-222	ENST00000488833	MPTX1	A8MV57	137 aa		13.47	□□□□□ -0.25
ATG9A-222	ENST00000488833	APOH	P02749	345 aa	Predicted RBP	13.47	□□□□□ -0.25
ATG9A-222	ENST00000488833	CD5	P06127	495 aa		13.47	□□□□□ -0.25
ATG9A-222	ENST00000488833	SMIM18	P0DKX4	95 aa		13.47	□□□□□ -0.25
ATG9A-222	ENST00000488833	RNASE2	P10153	161 aa	Known RBP	13.47	□□□□□ -0.25
ATG9A-222	ENST00000488833	ETV6	P41212	452 aa		13.47	□□□□□ -0.25
ATG9A-222	ENST00000488833	SUB1	P53999	127 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
ATG9A-222	ENST00000488833	OR13C8	Q8NGS7	320 aa		13.47	□□□□□ -0.25
ATG9A-222	ENST00000488833	C15orf40	Q8WUR7	153 aa		13.47	□□□□□ -0.25
ATG9A-222	ENST00000488833	RRNAD1	Q96FB5	475 aa	Known RBP	13.47	□□□□□ -0.25
ATG9A-222	ENST00000488833	VSIR	Q9H7M9	311 aa		13.47	□□□□□ -0.25
ATG9A-222	ENST00000488833	ZFAND3	Q9H8U3	227 aa		13.47	□□□□□ -0.25
ATG9A-222	ENST00000488833	DNASE2	O00115	360 aa	Predicted RBP	13.46	□□□□□ -0.25
ATG9A-222	ENST00000488833	CORT	O00230	105 aa		13.46	□□□□□ -0.25
ATG9A-222	ENST00000488833	RAB3D	O95716	219 aa		13.46	□□□□□ -0.25
ATG9A-222	ENST00000488833	CD74	P04233	296 aa		13.46	□□□□□ -0.25
ATG9A-222	ENST00000488833	UCP1	P25874	307 aa		13.46	□□□□□ -0.25
ATG9A-222	ENST00000488833	TAS2R19	P59542	299 aa		13.46	□□□□□ -0.25
ATG9A-222	ENST00000488833	GPR107	Q5VW38	600 aa		13.46	□□□□□ -0.25
ATG9A-222	ENST00000488833	TMEM229B	Q8NBD8	167 aa		13.46	□□□□□ -0.25
ATG9A-222	ENST00000488833	TERB2	Q8NHR7	220 aa		13.46	□□□□□ -0.25
ATG9A-222	ENST00000488833	MARCH1	Q8TCQ1	289 aa		13.46	□□□□□ -0.25
ATG9A-222	ENST00000488833	GATAD1	Q8WUU5	269 aa		13.46	□□□□□ -0.25
ATG9A-222	ENST00000488833	KLK5	Q9Y337	293 aa	Predicted RBP	13.46	□□□□□ -0.25

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