RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 DAZ1Q9NQZ3 744 aaKnown RBP13.34□□□□□ -0.27
ITGB1-215ENST00000488494 DNAH7Q8WXX0 4024 aa13.34□□□□□ -0.27
ITGB1-215ENST00000488494 CCDC160A6NGH7 325 aa13.33□□□□□ -0.28
ITGB1-215ENST00000488494 I3L2K1 104 aa13.33□□□□□ -0.28
ITGB1-215ENST00000488494 NDUFA4O00483 81 aa13.33□□□□□ -0.28
ITGB1-215ENST00000488494 MT-CO2P00403 227 aa13.33□□□□□ -0.28
ITGB1-215ENST00000488494 IFNA17P01571 189 aa13.33□□□□□ -0.28
ITGB1-215ENST00000488494 IGHV3-48P01763 117 aa13.33□□□□□ -0.28
ITGB1-215ENST00000488494 C8orf88P0DMB2 117 aa13.33□□□□□ -0.28
ITGB1-215ENST00000488494 TNFSF8P32971 234 aa13.33□□□□□ -0.28
ITGB1-215ENST00000488494 HOXA1P49639 335 aaPredicted RBP13.33□□□□□ -0.28
ITGB1-215ENST00000488494 SPATA25Q9BR10 227 aa13.33□□□□□ -0.28
ITGB1-215ENST00000488494 PDCD10Q9BUL8 212 aa13.33□□□□□ -0.28
ITGB1-215ENST00000488494 NXF2Q9GZY0 626 aaKnown RBP13.33□□□□□ -0.28
ITGB1-215ENST00000488494 SRD5A3Q9H8P0 318 aa13.33□□□□□ -0.28
ITGB1-215ENST00000488494 MRPL27Q9P0M9 148 aaKnown RBP13.33□□□□□ -0.28
ITGB1-215ENST00000488494 RYR3Q15413 4870 aa13.33□□□□□ -0.28
ITGB1-215ENST00000488494 FABP12A6NFH5 140 aa13.32□□□□□ -0.28
ITGB1-215ENST00000488494 OR11H12B2RN74 326 aa13.32□□□□□ -0.28
ITGB1-215ENST00000488494 ERHP84090 104 aaKnown RBP13.32□□□□□ -0.28
ITGB1-215ENST00000488494 SLC16A13Q7RTY0 426 aa13.32□□□□□ -0.28
ITGB1-215ENST00000488494 OR52B4Q8NGK2 314 aa13.32□□□□□ -0.28
ITGB1-215ENST00000488494 LHFPL5Q8TAF8 219 aa13.32□□□□□ -0.28
ITGB1-215ENST00000488494 GAR1Q9NY12 217 aaKnown RBP13.32□□□□□ -0.28
ITGB1-215ENST00000488494 CRYM-AS1A6NIL9 109 aa13.31□□□□□ -0.28
ITGB1-215ENST00000488494 NUPL2O15504 423 aaKnown RBP13.31□□□□□ -0.28
ITGB1-215ENST00000488494 ZNF207O43670 478 aaKnown RBP13.31□□□□□ -0.28
ITGB1-215ENST00000488494 CTSGP08311 255 aa13.31□□□□□ -0.28
ITGB1-215ENST00000488494 SNCAP37840 140 aa13.31□□□□□ -0.28
ITGB1-215ENST00000488494 MFAP4P55083 255 aa13.31□□□□□ -0.28
ITGB1-215ENST00000488494 RBPMS2Q6ZRY4 209 aaKnown RBP13.31□□□□□ -0.28
ITGB1-215ENST00000488494 RBPMSQ93062 196 aaKnown RBP13.31□□□□□ -0.28
ITGB1-215ENST00000488494 ZNF414Q96IQ9 312 aa13.31□□□□□ -0.28
ITGB1-215ENST00000488494 SOSTQ9BQB4 213 aa13.31□□□□□ -0.28
ITGB1-215ENST00000488494 RETNQ9HD89 108 aa13.31□□□□□ -0.28
ITGB1-215ENST00000488494 MCUBQ9NWR8 336 aa13.31□□□□□ -0.28
ITGB1-215ENST00000488494 RBMY1BA6NDE4 496 aaKnown RBP13.3□□□□□ -0.28
ITGB1-215ENST00000488494 RBMY1EA6NEQ0 496 aaKnown RBP13.3□□□□□ -0.28
ITGB1-215ENST00000488494 INS-IGF2F8WCM5 200 aa13.3□□□□□ -0.28
ITGB1-215ENST00000488494 CDS2O95674 445 aa13.3□□□□□ -0.28
ITGB1-215ENST00000488494 RBMY1DP0C7P1 496 aaKnown RBP13.3□□□□□ -0.28
ITGB1-215ENST00000488494 FCGR2BP31994 310 aaPredicted RBP13.3□□□□□ -0.28
ITGB1-215ENST00000488494 ETV6P41212 452 aa13.3□□□□□ -0.28
ITGB1-215ENST00000488494 RELQ04864 619 aaPredicted RBP13.3□□□□□ -0.28
ITGB1-215ENST00000488494 TMEM268Q5VZI3 342 aa13.3□□□□□ -0.28
ITGB1-215ENST00000488494 FAM219AQ8IW50 185 aa13.3□□□□□ -0.28
ITGB1-215ENST00000488494 MUC7Q8TAX7 377 aa13.3□□□□□ -0.28
ITGB1-215ENST00000488494 GLYATL2Q8WU03 294 aa13.3□□□□□ -0.28
ITGB1-215ENST00000488494 ENY2Q9NPA8 101 aa13.3□□□□□ -0.28
ITGB1-215ENST00000488494 SCP2D1Q9UJQ7 156 aa13.3□□□□□ -0.28
ITGB1-215ENST00000488494 GPR132Q9UNW8 380 aa13.3□□□□□ -0.28
ITGB1-215ENST00000488494 TRAV25A0A0B4J276 109 aa13.29□□□□□ -0.28
ITGB1-215ENST00000488494 C3orf84H3BNL1 204 aa13.29□□□□□ -0.28
ITGB1-215ENST00000488494 GNG7O60262 68 aa13.29□□□□□ -0.28
ITGB1-215ENST00000488494 DHODHQ02127 395 aa13.29□□□□□ -0.28
ITGB1-215ENST00000488494 LINC00322Q6ZN03 302 aaPredicted RBP13.29□□□□□ -0.28
ITGB1-215ENST00000488494 Q6ZRM9 215 aa13.29□□□□□ -0.28
ITGB1-215ENST00000488494 TRIM63Q969Q1 353 aa13.29□□□□□ -0.28
ITGB1-215ENST00000488494 CITED4Q96RK1 184 aa13.29□□□□□ -0.28
ITGB1-215ENST00000488494 TXN2Q99757 166 aa13.29□□□□□ -0.28
ITGB1-215ENST00000488494 RBM38Q9H0Z9 239 aaKnown RBP13.29□□□□□ -0.28
ITGB1-215ENST00000488494 PRR13Q9NZ81 148 aa13.29□□□□□ -0.28
ITGB1-215ENST00000488494 CACNG5Q9UF02 275 aa13.29□□□□□ -0.28
ITGB1-215ENST00000488494 V9GYH0 126 aa13.29□□□□□ -0.28
ITGB1-215ENST00000488494 C15orf62A8K5M9 175 aa13.28□□□□□ -0.28
ITGB1-215ENST00000488494 YIF1AO95070 293 aa13.28□□□□□ -0.28
ITGB1-215ENST00000488494 RNASE2P10153 161 aaKnown RBP13.28□□□□□ -0.28
ITGB1-215ENST00000488494 ANKRD55Q3KP44 614 aa13.28□□□□□ -0.28
ITGB1-215ENST00000488494 PYDC2Q56P42 97 aa13.28□□□□□ -0.28
ITGB1-215ENST00000488494 SELENOHQ8IZQ5 122 aaKnown RBP13.28□□□□□ -0.28
ITGB1-215ENST00000488494 TMEM230Q96A57 120 aa13.28□□□□□ -0.28
ITGB1-215ENST00000488494 SPAG8Q99932 426 aaPredicted RBP13.28□□□□□ -0.28
ITGB1-215ENST00000488494 K7EMT4 169 aa13.27□□□□□ -0.29
ITGB1-215ENST00000488494 SPCS3P61009 180 aa13.27□□□□□ -0.29
ITGB1-215ENST00000488494 AARDQ4LEZ3 155 aa13.27□□□□□ -0.29
ITGB1-215ENST00000488494 FAM110AQ9BQ89 295 aa13.27□□□□□ -0.29
ITGB1-215ENST00000488494 HIPK2Q9H2X6 1198 aa13.27□□□□□ -0.29
ITGB1-215ENST00000488494 IGHV3-49A0A0A0MS15 119 aa13.26□□□□□ -0.29
ITGB1-215ENST00000488494 CORTO00230 105 aa13.26□□□□□ -0.29
ITGB1-215ENST00000488494 TSPAN4O14817 238 aa13.26□□□□□ -0.29
ITGB1-215ENST00000488494 SUB1P53999 127 aaKnown RBP eCLIP13.26□□□□□ -0.29
ITGB1-215ENST00000488494 KLF9Q13886 244 aaPredicted RBP13.26□□□□□ -0.29
ITGB1-215ENST00000488494 ZNF79Q15937 498 aa13.26□□□□□ -0.29
ITGB1-215ENST00000488494 PVRIGQ6DKI7 326 aa13.26□□□□□ -0.29
ITGB1-215ENST00000488494 DUSP18Q8NEJ0 188 aa13.26□□□□□ -0.29
ITGB1-215ENST00000488494 SCGB3A2Q96PL1 93 aa13.26□□□□□ -0.29
ITGB1-215ENST00000488494 EDA2RQ9HAV5 297 aa13.26□□□□□ -0.29
ITGB1-215ENST00000488494 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.26□□□□□ -0.29
ITGB1-215ENST00000488494 TMEM56-RWDD3S4R434 201 aa13.26□□□□□ -0.29
ITGB1-215ENST00000488494 IGHV7-4-1A0A0J9YVY3 117 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 NXPH3O95157 252 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 AKR1C4P17516 323 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 S100A5P33763 92 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 FAUP35544 74 aaKnown RBP13.25□□□□□ -0.29
ITGB1-215ENST00000488494 OPRK1P41145 380 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 NPBWR1P48145 328 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 AP3S2P59780 193 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 TMEM187Q14656 261 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 BSXQ3C1V8 233 aa13.25□□□□□ -0.29
ITGB1-215ENST00000488494 LAMTOR1Q6IAA8 161 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms