RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 GPR107Q5VW38 600 aa16.77■□□□□ 0.28
PTPN4-211ENST00000488279 STPG3Q8N7X2 389 aa16.77■□□□□ 0.28
PTPN4-211ENST00000488279 ZFAND1Q8TCF1 268 aa16.77■□□□□ 0.28
PTPN4-211ENST00000488279 TP53RKQ96S44 253 aa16.77■□□□□ 0.28
PTPN4-211ENST00000488279 ABHD1Q96SE0 405 aa16.77■□□□□ 0.28
PTPN4-211ENST00000488279 RNF2Q99496 336 aa16.77■□□□□ 0.28
PTPN4-211ENST00000488279 A0A0B4J293 547 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 KIR2DL5BA0A0G2JN68 375 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 KIR2DL5BA0A0G2JPC4 375 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 C3orf85A0A1B0GTC6 90 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 IGKV1-5P01602 117 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 BMI1P35226 326 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 AKR1C2P52895 323 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 SPINK9Q5DT21 86 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 WFDC3Q8IUB2 231 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 KIR2DL5AQ8N109 375 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 KIR2DL5BQ8NHK3 375 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 TERB2Q8NHR7 220 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 ZNF414Q96IQ9 312 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 COPZ2Q9P299 210 aa16.76■□□□□ 0.27
PTPN4-211ENST00000488279 IFNA17P01571 189 aa16.75■□□□□ 0.27
PTPN4-211ENST00000488279 SMIM18P0DKX4 95 aa16.75■□□□□ 0.27
PTPN4-211ENST00000488279 CMC4P56277 68 aaPredicted RBP16.75■□□□□ 0.27
PTPN4-211ENST00000488279 SLC35G3Q8N808 338 aa16.75■□□□□ 0.27
PTPN4-211ENST00000488279 TMEM229BQ8NBD8 167 aa16.75■□□□□ 0.27
PTPN4-211ENST00000488279 DUSP18Q8NEJ0 188 aa16.75■□□□□ 0.27
PTPN4-211ENST00000488279 GALNT14Q96FL9 552 aa16.75■□□□□ 0.27
PTPN4-211ENST00000488279 PDCD10Q9BUL8 212 aa16.75■□□□□ 0.27
PTPN4-211ENST00000488279 IGHV3-49A0A0A0MS15 119 aa16.74■□□□□ 0.27
PTPN4-211ENST00000488279 ST8SIA3O43173 380 aa16.74■□□□□ 0.27
PTPN4-211ENST00000488279 P0C879 139 aa16.74■□□□□ 0.27
PTPN4-211ENST00000488279 RPL35AP18077 110 aaKnown RBP16.74■□□□□ 0.27
PTPN4-211ENST00000488279 NPBWR1P48145 328 aa16.74■□□□□ 0.27
PTPN4-211ENST00000488279 PPP5CP53041 499 aa16.74■□□□□ 0.27
PTPN4-211ENST00000488279 SUB1P53999 127 aaKnown RBP eCLIP16.74■□□□□ 0.27
PTPN4-211ENST00000488279 TAS2R19P59542 299 aa16.74■□□□□ 0.27
PTPN4-211ENST00000488279 TRIM16LQ309B1 348 aa16.74■□□□□ 0.27
PTPN4-211ENST00000488279 DEFB135Q30KP9 77 aa16.74■□□□□ 0.27
PTPN4-211ENST00000488279 SCGB2B2Q4G0G5 96 aa16.74■□□□□ 0.27
PTPN4-211ENST00000488279 CCDC71LQ8N9Z2 235 aa16.74■□□□□ 0.27
PTPN4-211ENST00000488279 OR4D10Q8NGI6 311 aa16.74■□□□□ 0.27
PTPN4-211ENST00000488279 GINS3Q9BRX5 216 aa16.74■□□□□ 0.27
PTPN4-211ENST00000488279 C6orf62Q9GZU0 229 aaPredicted RBP16.74■□□□□ 0.27
PTPN4-211ENST00000488279 A0A0J9YWU9 116 aa16.73■□□□□ 0.27
PTPN4-211ENST00000488279 INS-IGF2F8WCM5 200 aa16.73■□□□□ 0.27
PTPN4-211ENST00000488279 RAB3DO95716 219 aa16.73■□□□□ 0.27
PTPN4-211ENST00000488279 CD74P04233 296 aa16.73■□□□□ 0.27
PTPN4-211ENST00000488279 TNFRSF9Q07011 255 aa16.73■□□□□ 0.27
PTPN4-211ENST00000488279 SP6Q3SY56 376 aa16.73■□□□□ 0.27
PTPN4-211ENST00000488279 RRNAD1Q96FB5 475 aaKnown RBP16.73■□□□□ 0.27
PTPN4-211ENST00000488279 PLECQ15149 4684 aaKnown RBP16.72■□□□□ 0.27
PTPN4-211ENST00000488279 GABARAPH6UMI1 98 aa16.72■□□□□ 0.27
PTPN4-211ENST00000488279 RGS5O15539 181 aa16.72■□□□□ 0.27
PTPN4-211ENST00000488279 B3GALNT1O75752 331 aa16.72■□□□□ 0.27
PTPN4-211ENST00000488279 TFPI2P48307 235 aa16.72■□□□□ 0.27
PTPN4-211ENST00000488279 PAFAH1B2P68402 229 aa16.72■□□□□ 0.27
PTPN4-211ENST00000488279 STEAP1BQ6NZ63 245 aa16.72■□□□□ 0.27
PTPN4-211ENST00000488279 TOMM20LQ6UXN7 152 aa16.72■□□□□ 0.27
PTPN4-211ENST00000488279 APRG1Q8IVJ8 170 aa16.72■□□□□ 0.27
PTPN4-211ENST00000488279 OR13C8Q8NGS7 320 aa16.72■□□□□ 0.27
PTPN4-211ENST00000488279 RNF183Q96D59 192 aa16.72■□□□□ 0.27
PTPN4-211ENST00000488279 MAP6D1Q9H9H5 199 aa16.72■□□□□ 0.27
PTPN4-211ENST00000488279 HYDINQ4G0P3 5121 aa16.72■□□□□ 0.27
PTPN4-211ENST00000488279 IGKV3-7A0A075B6H7 116 aa16.71■□□□□ 0.27
PTPN4-211ENST00000488279 IGHV3OR16-13A0A075B7E8 117 aa16.71■□□□□ 0.27
PTPN4-211ENST00000488279 IGHV3-74A0A0B4J1X5 117 aa16.71■□□□□ 0.27
PTPN4-211ENST00000488279 CORTO00230 105 aa16.71■□□□□ 0.27
PTPN4-211ENST00000488279 CD5P06127 495 aa16.71■□□□□ 0.27
PTPN4-211ENST00000488279 ETV6P41212 452 aa16.71■□□□□ 0.27
PTPN4-211ENST00000488279 FAM90A2PQ658T7 463 aa16.71■□□□□ 0.27
PTPN4-211ENST00000488279 LYG2Q86SG7 212 aa16.71■□□□□ 0.27
PTPN4-211ENST00000488279 RNASE11Q8TAA1 199 aaKnown RBP16.71■□□□□ 0.27
PTPN4-211ENST00000488279 ENY2Q9NPA8 101 aa16.71■□□□□ 0.27
PTPN4-211ENST00000488279 CXorf65A6NEN9 183 aa16.7■□□□□ 0.26
PTPN4-211ENST00000488279 TMEM50AO95807 157 aa16.7■□□□□ 0.26
PTPN4-211ENST00000488279 UCP1P25874 307 aa16.7■□□□□ 0.26
PTPN4-211ENST00000488279 HOXA1P49639 335 aaPredicted RBP16.7■□□□□ 0.26
PTPN4-211ENST00000488279 SSBP1Q04837 148 aaKnown RBP16.7■□□□□ 0.26
PTPN4-211ENST00000488279 PVRIGQ6DKI7 326 aa16.7■□□□□ 0.26
PTPN4-211ENST00000488279 ZNF600Q6ZNG1 722 aa16.7■□□□□ 0.26
PTPN4-211ENST00000488279 GPR141Q7Z602 305 aa16.7■□□□□ 0.26
PTPN4-211ENST00000488279 GBGT1Q8N5D6 347 aa16.7■□□□□ 0.26
PTPN4-211ENST00000488279 MARCH1Q8TCQ1 289 aa16.7■□□□□ 0.26
PTPN4-211ENST00000488279 MIXL1Q9H2W2 232 aa16.7■□□□□ 0.26
PTPN4-211ENST00000488279 MRPS10P82664 201 aaKnown RBP16.69■□□□□ 0.26
PTPN4-211ENST00000488279 TCF24Q7RTU0 167 aa16.69■□□□□ 0.26
PTPN4-211ENST00000488279 MRPS26Q9BYN8 205 aaKnown RBP16.69■□□□□ 0.26
PTPN4-211ENST00000488279 CSTL1Q9H114 145 aa16.69■□□□□ 0.26
PTPN4-211ENST00000488279 PUS1Q9Y606 427 aaKnown RBP eCLIP16.69■□□□□ 0.26
PTPN4-211ENST00000488279 CTDSP2O14595 271 aa16.68■□□□□ 0.26
PTPN4-211ENST00000488279 RNASE2P10153 161 aaKnown RBP16.68■□□□□ 0.26
PTPN4-211ENST00000488279 PMS2P11Q13670 270 aa16.68■□□□□ 0.26
PTPN4-211ENST00000488279 MEF2DQ14814 521 aa16.68■□□□□ 0.26
PTPN4-211ENST00000488279 VSIRQ9H7M9 311 aa16.68■□□□□ 0.26
PTPN4-211ENST00000488279 C14orf166Q9Y224 244 aaKnown RBP16.68■□□□□ 0.26
PTPN4-211ENST00000488279 EPPK1P58107 5090 aaKnown RBP16.67■□□□□ 0.26
PTPN4-211ENST00000488279 CDS2O95674 445 aa16.67■□□□□ 0.26
PTPN4-211ENST00000488279 ZNF124Q15973 351 aa16.67■□□□□ 0.26
PTPN4-211ENST00000488279 FAM219AQ8IW50 185 aa16.67■□□□□ 0.26
PTPN4-211ENST00000488279 TMEM217Q8N7C4 229 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms