RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 UBE2CO00762 179 aa9.27□□□□□ -0.93
SREBF1-215ENST00000487401 ATG12O94817 140 aa9.27□□□□□ -0.93
SREBF1-215ENST00000487401 IGKV1-39P01597 117 aa9.27□□□□□ -0.93
SREBF1-215ENST00000487401 IGKV1D-39P04432 117 aa9.27□□□□□ -0.93
SREBF1-215ENST00000487401 CTSDP07339 412 aaPredicted RBP9.27□□□□□ -0.93
SREBF1-215ENST00000487401 HNRNPCP07910 306 aaKnown RBP eCLIP9.27□□□□□ -0.93
SREBF1-215ENST00000487401 CTSGP08311 255 aa9.27□□□□□ -0.93
SREBF1-215ENST00000487401 PRCDQ00LT1 54 aa9.27□□□□□ -0.93
SREBF1-215ENST00000487401 RNASE10Q5GAN6 216 aaKnown RBP9.27□□□□□ -0.93
SREBF1-215ENST00000487401 PINX1Q96BK5 328 aaKnown RBP9.27□□□□□ -0.93
SREBF1-215ENST00000487401 ZNF486Q96H40 463 aaPredicted RBP9.27□□□□□ -0.93
SREBF1-215ENST00000487401 SMPXQ9UHP9 88 aa9.27□□□□□ -0.93
SREBF1-215ENST00000487401 PLECQ15149 4684 aaKnown RBP9.27□□□□□ -0.93
SREBF1-215ENST00000487401 I3L2K1 104 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 SPRY2O43597 315 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 MT-CO2P00403 227 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 PI3P19957 117 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 SNCAP37840 140 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 RND3P61587 244 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 IFITM3Q01628 133 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 STPG3Q8N7X2 389 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 TMEM116Q8NCL8 245 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 OR52I2Q8NH67 350 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 C15orf40Q8WUR7 153 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 RHPN1-AS1Q9BWJ2 59 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 C6orf62Q9GZU0 229 aaPredicted RBP9.26□□□□□ -0.93
SREBF1-215ENST00000487401 EXTL2Q9UBQ6 330 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 KLK11Q9UBX7 282 aa9.26□□□□□ -0.93
SREBF1-215ENST00000487401 TRAV14DV4A0A0A6YYC5 116 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 IGHV7-4-1A0A0J9YVY3 117 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 GNG7O60262 68 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 IFNA17P01571 189 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 IGHV3-48P01763 117 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 CD3DP04234 171 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 TBPP20226 339 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 FCGR2BP31994 310 aaPredicted RBP9.25□□□□□ -0.93
SREBF1-215ENST00000487401 NPBWR1P48145 328 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 CMC4P56277 68 aaPredicted RBP9.25□□□□□ -0.93
SREBF1-215ENST00000487401 PIGPP57054 158 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 SPINK9Q5DT21 86 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 Q6ZWC4 215 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 ARRDC1Q8N5I2 433 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 ZNF114Q8NC26 417 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 DUSP18Q8NEJ0 188 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 ZFAND1Q8TCF1 268 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 RNF2Q99496 336 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 PDCD10Q9BUL8 212 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 COPZ2Q9P299 210 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 TP53TG1Q9Y2A0 90 aa9.25□□□□□ -0.93
SREBF1-215ENST00000487401 IGHV3-49A0A0A0MS15 119 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 KIR2DL5BA0A0G2JN68 375 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 KIR2DL5BA0A0G2JPC4 375 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 C3orf85A0A1B0GTC6 90 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 CXorf65A6NEN9 183 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 CHEK1O14757 476 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 RPL35AP18077 110 aaKnown RBP9.24□□□□□ -0.93
SREBF1-215ENST00000487401 BMI1P35226 326 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 TFPI2P48307 235 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 AKR1C2P52895 323 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 SUB1P53999 127 aaKnown RBP eCLIP9.24□□□□□ -0.938e-8■■□□□ 11.8
SREBF1-215ENST00000487401 PAFAH1B2P68402 229 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 IZUMO4Q1ZYL8 232 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 ODF3L2Q3SX64 289 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 SCGB2B2Q4G0G5 96 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 LHFPL1Q86WI0 220 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 KIR2DL5AQ8N109 375 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 SLC35G3Q8N808 338 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 CCDC71LQ8N9Z2 235 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 KIR2DL5BQ8NHK3 375 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 GALNT14Q96FL9 552 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 GINS3Q9BRX5 216 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 ENY2Q9NPA8 101 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 MTFP1Q9UDX5 166 aa9.24□□□□□ -0.93
SREBF1-215ENST00000487401 IGKV3-7A0A075B6H7 116 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 A0A0B4J293 547 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 A0A0J9YWU9 116 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 UPK1BO75841 260 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 RAB3DO95716 219 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 IGKV1-5P01602 117 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 ETV6P41212 452 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 PMS2P11Q13670 270 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 DEFB135Q30KP9 77 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 WFDC3Q8IUB2 231 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 TMEM229BQ8NBD8 167 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 TERB2Q8NHR7 220 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 RNASE11Q8TAA1 199 aaKnown RBP9.23□□□□□ -0.93
SREBF1-215ENST00000487401 RRNAD1Q96FB5 475 aaKnown RBP9.23□□□□□ -0.93
SREBF1-215ENST00000487401 OR10C1Q96KK4 312 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 TP53RKQ96S44 253 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 ABHD1Q96SE0 405 aa9.23□□□□□ -0.93
SREBF1-215ENST00000487401 IGHV3OR16-13A0A075B7E8 117 aa9.22□□□□□ -0.93
SREBF1-215ENST00000487401 IGHV3-74A0A0B4J1X5 117 aa9.22□□□□□ -0.93
SREBF1-215ENST00000487401 RGS5O15539 181 aa9.22□□□□□ -0.93
SREBF1-215ENST00000487401 ST8SIA3O43173 380 aa9.22□□□□□ -0.93
SREBF1-215ENST00000487401 CD5P06127 495 aa9.22□□□□□ -0.93
SREBF1-215ENST00000487401 S100A5P33763 92 aa9.22□□□□□ -0.93
SREBF1-215ENST00000487401 HOXA1P49639 335 aaPredicted RBP9.22□□□□□ -0.93
SREBF1-215ENST00000487401 TAS2R19P59542 299 aa9.22□□□□□ -0.93
SREBF1-215ENST00000487401 TNFRSF9Q07011 255 aa9.22□□□□□ -0.93
SREBF1-215ENST00000487401 SP6Q3SY56 376 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms