RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 CLEC5AQ9NY25 188 aa11.02□□□□□ -0.65
MCF2L-228ENST00000487354 A0A1B0GU03 582 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 KNCNA6PVL3 124 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 K7EQG2 157 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 ST8SIA3O43173 380 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 SCGNO76038 276 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 MT-CO2P00403 227 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 KRASP01116 189 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 SPP1P10451 314 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 F2RP25116 425 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 MFAP4P55083 255 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 PAFAH1B2P68402 229 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 OR5H6Q8NGV6 325 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 MISP3Q96FF7 219 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 DAPK2Q9UIK4 370 aa11.01□□□□□ -0.65
MCF2L-228ENST00000487354 PGLYRP1O75594 196 aaPredicted RBP11□□□□□ -0.65
MCF2L-228ENST00000487354 CD5P06127 495 aa11□□□□□ -0.65
MCF2L-228ENST00000487354 LPAR6P43657 344 aa11□□□□□ -0.65
MCF2L-228ENST00000487354 ERVK-16P61578 105 aa11□□□□□ -0.65
MCF2L-228ENST00000487354 TMEM41BQ5BJD5 291 aa11□□□□□ -0.65
MCF2L-228ENST00000487354 MORN3Q6PF18 240 aaPredicted RBP11□□□□□ -0.65
MCF2L-228ENST00000487354 NRG4Q8WWG1 115 aa11□□□□□ -0.65
MCF2L-228ENST00000487354 PRNDQ9UKY0 176 aa11□□□□□ -0.65
MCF2L-228ENST00000487354 TBC1D24Q9ULP9 559 aa11□□□□□ -0.65
MCF2L-228ENST00000487354 TRAV18A0A075B6X5 111 aa10.99□□□□□ -0.65
MCF2L-228ENST00000487354 DNASE2O00115 360 aaPredicted RBP10.99□□□□□ -0.65
MCF2L-228ENST00000487354 UBE2UQ5VVX9 321 aa10.99□□□□□ -0.65
MCF2L-228ENST00000487354 SFXN4Q6P4A7 337 aa10.99□□□□□ -0.65
MCF2L-228ENST00000487354 Q6ZRM9 215 aa10.99□□□□□ -0.65
MCF2L-228ENST00000487354 OR5AP2Q8NGF4 316 aa10.99□□□□□ -0.65
MCF2L-228ENST00000487354 DCANP1Q8TF63 244 aa10.99□□□□□ -0.65
MCF2L-228ENST00000487354 GRAMD2BQ96HH9 432 aa10.99□□□□□ -0.65
MCF2L-228ENST00000487354 TMEM56Q96MV1 263 aa10.99□□□□□ -0.65
MCF2L-228ENST00000487354 GINS3Q9BRX5 216 aa10.99□□□□□ -0.65
MCF2L-228ENST00000487354 NDUFAF3Q9BU61 184 aa10.99□□□□□ -0.65
MCF2L-228ENST00000487354 FXYD6Q9H0Q3 95 aa10.99□□□□□ -0.65
MCF2L-228ENST00000487354 TXNL4BQ9NX01 149 aaKnown RBP10.99□□□□□ -0.65
MCF2L-228ENST00000487354 PLA2G2EQ9NZK7 142 aa10.99□□□□□ -0.65
MCF2L-228ENST00000487354 PUS1Q9Y606 427 aaKnown RBP eCLIP10.99□□□□□ -0.65
MCF2L-228ENST00000487354 DNAH5Q8TE73 4624 aa10.98□□□□□ -0.65
MCF2L-228ENST00000487354 IGLV2-18A0A075B6J9 118 aa10.98□□□□□ -0.65
MCF2L-228ENST00000487354 GNG7O60262 68 aa10.98□□□□□ -0.65
MCF2L-228ENST00000487354 FGF9P31371 208 aaPredicted RBP10.98□□□□□ -0.65
MCF2L-228ENST00000487354 DUSP18Q8NEJ0 188 aa10.98□□□□□ -0.65
MCF2L-228ENST00000487354 MOB3AQ96BX8 217 aa10.98□□□□□ -0.65
MCF2L-228ENST00000487354 VCXQ9H320 206 aa10.98□□□□□ -0.65
MCF2L-228ENST00000487354 AUNIPQ9H7T9 357 aa10.98□□□□□ -0.65
MCF2L-228ENST00000487354 RABAC1Q9UI14 185 aa10.98□□□□□ -0.65
MCF2L-228ENST00000487354 MEIS3P1A6NDR6 274 aa10.97□□□□□ -0.65
MCF2L-228ENST00000487354 SNAPC5O75971 98 aa10.97□□□□□ -0.65
MCF2L-228ENST00000487354 IGKV1-39P01597 117 aa10.97□□□□□ -0.65
MCF2L-228ENST00000487354 IGKV1D-39P04432 117 aa10.97□□□□□ -0.65
MCF2L-228ENST00000487354 EIF4EP06730 217 aaKnown RBP10.97□□□□□ -0.65
MCF2L-228ENST00000487354 ZNF688P0C7X2 276 aa10.97□□□□□ -0.65
MCF2L-228ENST00000487354 PRCDQ00LT1 54 aa10.97□□□□□ -0.65
MCF2L-228ENST00000487354 ZNF600Q6ZNG1 722 aa10.97□□□□□ -0.65
MCF2L-228ENST00000487354 PINX1Q96BK5 328 aaKnown RBP10.97□□□□□ -0.65
MCF2L-228ENST00000487354 MRPL36Q9P0J6 103 aaKnown RBP10.97□□□□□ -0.65
MCF2L-228ENST00000487354 ANAPC10Q9UM13 185 aa10.97□□□□□ -0.65
MCF2L-228ENST00000487354 RRP15Q9Y3B9 282 aaKnown RBP10.97□□□□□ -0.65
MCF2L-228ENST00000487354 EBAG9O00559 213 aa10.96□□□□□ -0.65
MCF2L-228ENST00000487354 CLEC2LP0C7M8 214 aa10.96□□□□□ -0.65
MCF2L-228ENST00000487354 HERV-K104P61576 105 aa10.96□□□□□ -0.65
MCF2L-228ENST00000487354 RPL11P62913 178 aaKnown RBP10.96□□□□□ -0.65
MCF2L-228ENST00000487354 ACTL10Q5JWF8 245 aa10.96□□□□□ -0.65
MCF2L-228ENST00000487354 DHRS11Q6UWP2 260 aa10.96□□□□□ -0.65
MCF2L-228ENST00000487354 STXBP6Q8NFX7 210 aa10.96□□□□□ -0.65
MCF2L-228ENST00000487354 SEC22AQ96IW7 307 aa10.96□□□□□ -0.65
MCF2L-228ENST00000487354 FKBP11Q9NYL4 201 aa10.96□□□□□ -0.65
MCF2L-228ENST00000487354 CDK2AP2O75956 126 aa10.95□□□□□ -0.66
MCF2L-228ENST00000487354 RFX2P48378 723 aa10.95□□□□□ -0.66
MCF2L-228ENST00000487354 PPP5CP53041 499 aa10.95□□□□□ -0.66
MCF2L-228ENST00000487354 TPRA1Q86W33 373 aa10.95□□□□□ -0.66
MCF2L-228ENST00000487354 EHFQ9NZC4 300 aa10.95□□□□□ -0.66
MCF2L-228ENST00000487354 A0A0A6YYH2 397 aa10.94□□□□□ -0.66
MCF2L-228ENST00000487354 A6NJ64 397 aa10.94□□□□□ -0.66
MCF2L-228ENST00000487354 TMEM50AO95807 157 aa10.94□□□□□ -0.66
MCF2L-228ENST00000487354 CRYBB3P26998 211 aa10.94□□□□□ -0.66
MCF2L-228ENST00000487354 P2RY1P47900 373 aa10.94□□□□□ -0.66
MCF2L-228ENST00000487354 TSC22D3Q99576 134 aa10.94□□□□□ -0.66
MCF2L-228ENST00000487354 ZNF2Q9BSG1 426 aaPredicted RBP10.94□□□□□ -0.66
MCF2L-228ENST00000487354 SDC2P34741 201 aa10.93□□□□□ -0.66
MCF2L-228ENST00000487354 SCAND1P57086 179 aa10.93□□□□□ -0.66
MCF2L-228ENST00000487354 SPINK9Q5DT21 86 aa10.93□□□□□ -0.66
MCF2L-228ENST00000487354 BORCS5Q969J3 196 aa10.93□□□□□ -0.66
MCF2L-228ENST00000487354 RAB40CQ96S21 281 aa10.93□□□□□ -0.66
MCF2L-228ENST00000487354 FNDC4Q9H6D8 234 aaPredicted RBP10.93□□□□□ -0.66
MCF2L-228ENST00000487354 RNF167Q9H6Y7 350 aa10.93□□□□□ -0.66
MCF2L-228ENST00000487354 U3KQE9 123 aa10.93□□□□□ -0.66
MCF2L-228ENST00000487354 GPR31O00270 319 aa10.92□□□□□ -0.66
MCF2L-228ENST00000487354 IFNA10P01566 189 aa10.92□□□□□ -0.66
MCF2L-228ENST00000487354 CBX5P45973 191 aa10.92□□□□□ -0.66
MCF2L-228ENST00000487354 NPBWR1P48145 328 aa10.92□□□□□ -0.66
MCF2L-228ENST00000487354 HSPE1P61604 102 aaKnown RBP10.92□□□□□ -0.66
MCF2L-228ENST00000487354 IZUMO4Q1ZYL8 232 aa10.92□□□□□ -0.66
MCF2L-228ENST00000487354 ZNF705AQ6ZN79 300 aaPredicted RBP10.92□□□□□ -0.66
MCF2L-228ENST00000487354 CENPSQ8N2Z9 138 aa10.92□□□□□ -0.66
MCF2L-228ENST00000487354 MAPKAPK5-AS1Q8N8E1 139 aa10.92□□□□□ -0.66
MCF2L-228ENST00000487354 TMEM231Q9H6L2 316 aa10.92□□□□□ -0.66
MCF2L-228ENST00000487354 ZNF705FA8MVS1 300 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms