RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 IGHV3OR16-8A0A075B7F1 116 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 TRBV7-1A0A0A6YYK4 115 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 TMEM213A2RRL7 107 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 OR2T8A6NH00 312 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 C2orf70A6NJV1 201 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 GGCTO75223 188 aaKnown RBP5.42□□□□□ -1.54
UBE4B-209ENST00000487244 NXPH3O95157 252 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 CDS2O95674 445 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 CLEC3BP05452 202 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 AKR1C4P17516 323 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 ETV6P41212 452 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 HSPE1P61604 102 aaKnown RBP5.42□□□□□ -1.54
UBE4B-209ENST00000487244 BAK1Q16611 211 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 TMEM268Q5VZI3 342 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 THOC7Q6I9Y2 204 aaKnown RBP5.42□□□□□ -1.54
UBE4B-209ENST00000487244 HSD17B13Q7Z5P4 300 aaPredicted RBP5.42□□□□□ -1.54
UBE4B-209ENST00000487244 SELENOHQ8IZQ5 122 aaKnown RBP5.42□□□□□ -1.54
UBE4B-209ENST00000487244 TOMM5Q8N4H5 51 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 OR2C3Q8N628 320 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 SCARB1Q8WTV0 552 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 RBPMSQ93062 196 aaKnown RBP5.42□□□□□ -1.54
UBE4B-209ENST00000487244 CXorf58Q96LI9 332 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 TMEM56Q96MV1 263 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 B9D2Q9BPU9 175 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 PLEKHA3Q9HB20 300 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 FKBP11Q9NYL4 201 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 SCP2D1Q9UJQ7 156 aa5.42□□□□□ -1.54
UBE4B-209ENST00000487244 ZNF320A2RRD8 509 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 I3L2K1 104 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 LGALS9O00182 355 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 TGOLN2O43493 480 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 FOLR2P14207 255 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 CCR6P51684 374 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 CD69Q07108 199 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 TMEM187Q14656 261 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 CD300EQ496F6 205 aaPredicted RBP5.41□□□□□ -1.54
UBE4B-209ENST00000487244 TM4SF20Q53R12 229 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 FAM209BQ5JX69 171 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 SPANXN2Q5MJ10 180 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 TMED4Q7Z7H5 227 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 GPHB5Q86YW7 130 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 Q8N1Y9 231 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 SLC35G3Q8N808 338 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 UBAC2Q8NBM4 344 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 ZNF114Q8NC26 417 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 OR1P1Q8NH06 330 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 RNASE11Q8TAA1 199 aaKnown RBP5.41□□□□□ -1.54
UBE4B-209ENST00000487244 VN1R17PQ8TDU5 208 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 GPR146Q96CH1 333 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 RRNAD1Q96FB5 475 aaKnown RBP5.41□□□□□ -1.54
UBE4B-209ENST00000487244 ASCL2Q99929 193 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 CHRDL1Q9BU40 450 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 C21orf62Q9NYP8 219 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 SIGLEC8Q9NYZ4 499 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 ZMAT5Q9UDW3 170 aaKnown RBP5.41□□□□□ -1.54
UBE4B-209ENST00000487244 CACNG5Q9UF02 275 aa5.41□□□□□ -1.54
UBE4B-209ENST00000487244 LINC00854A0A1B0GVQ3 168 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 A8MWP6 167 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 B3GALNT1O75752 331 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 MT-CO2P00403 227 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 IFNA17P01571 189 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 FRMD6-AS1P0C7T7 363 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 RNASE2P10153 161 aaKnown RBP5.4□□□□□ -1.54
UBE4B-209ENST00000487244 CBLN1P23435 193 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 BTCP35070 178 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 FAUP35544 74 aaKnown RBP5.4□□□□□ -1.54
UBE4B-209ENST00000487244 HOXA1P49639 335 aaPredicted RBP5.4□□□□□ -1.54
UBE4B-209ENST00000487244 AP3S2P59780 193 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 DHODHQ02127 395 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 TATDN3Q17R31 274 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 DEFB114Q30KQ6 69 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 AARDQ4LEZ3 155 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 ZNF57Q68EA5 555 aaPredicted RBP5.4□□□□□ -1.54
UBE4B-209ENST00000487244 PLET1Q6UQ28 207 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 LYZL2Q7Z4W2 148 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 SGPP2Q8IWX5 399 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 DYNLRB2Q8TF09 96 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 PINX1Q96BK5 328 aaKnown RBP5.4□□□□□ -1.54
UBE4B-209ENST00000487244 GALNT14Q96FL9 552 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 ZNF436Q9C0F3 470 aaPredicted RBP5.4□□□□□ -1.54
UBE4B-209ENST00000487244 WFDC10AQ9H1F0 79 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 THYN1Q9P016 225 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 MRPL36Q9P0J6 103 aaKnown RBP5.4□□□□□ -1.54
UBE4B-209ENST00000487244 PEMTQ9UBM1 199 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 MLXQ9UH92 298 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 SMAD5-AS1Q9Y6J3 95 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 TMEM56-RWDD3S4R434 201 aa5.4□□□□□ -1.54
UBE4B-209ENST00000487244 ZNF785A8K8V0 405 aa5.39□□□□□ -1.55
UBE4B-209ENST00000487244 INS-IGF2F8WCM5 200 aa5.39□□□□□ -1.55
UBE4B-209ENST00000487244 CYB5BO43169 146 aa5.39□□□□□ -1.55
UBE4B-209ENST00000487244 ZNF207O43670 478 aaKnown RBP5.39□□□□□ -1.55
UBE4B-209ENST00000487244 ATG12O94817 140 aa5.39□□□□□ -1.55
UBE4B-209ENST00000487244 CTSGP08311 255 aa5.39□□□□□ -1.55
UBE4B-209ENST00000487244 IGHV4-30-4P0DP06 118 aa5.39□□□□□ -1.55
UBE4B-209ENST00000487244 RPL11P62913 178 aaKnown RBP5.39□□□□□ -1.55
UBE4B-209ENST00000487244 ERHP84090 104 aaKnown RBP5.39□□□□□ -1.55
UBE4B-209ENST00000487244 PPP1R1AQ13522 171 aa5.39□□□□□ -1.55
UBE4B-209ENST00000487244 BSXQ3C1V8 233 aa5.39□□□□□ -1.55
UBE4B-209ENST00000487244 ANKRD55Q3KP44 614 aa5.39□□□□□ -1.55
UBE4B-209ENST00000487244 FAM106AQ4KMX7 169 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms