RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 Q6ZRM9 215 aa16.94■□□□□ 0.3
CDHR3-212ENST00000487084 Q8N1Y9 231 aa16.94■□□□□ 0.3
CDHR3-212ENST00000487084 CHRDL1Q9BU40 450 aa16.94■□□□□ 0.3
CDHR3-212ENST00000487084 TECRQ9NZ01 308 aaKnown RBP16.94■□□□□ 0.3
CDHR3-212ENST00000487084 CACNG5Q9UF02 275 aa16.94■□□□□ 0.3
CDHR3-212ENST00000487084 UFC1Q9Y3C8 167 aa16.94■□□□□ 0.3
CDHR3-212ENST00000487084 IGHV3-48P01763 117 aa16.93■□□□□ 0.3
CDHR3-212ENST00000487084 IGHV4-30-4P0DP06 118 aa16.93■□□□□ 0.3
CDHR3-212ENST00000487084 INPP1P49441 399 aa16.93■□□□□ 0.3
CDHR3-212ENST00000487084 TMEM187Q14656 261 aa16.93■□□□□ 0.3
CDHR3-212ENST00000487084 SPSB3Q6PJ21 355 aa16.93■□□□□ 0.3
CDHR3-212ENST00000487084 TMED4Q7Z7H5 227 aa16.93■□□□□ 0.3
CDHR3-212ENST00000487084 UXS1Q8NBZ7 420 aa16.93■□□□□ 0.3
CDHR3-212ENST00000487084 GPR146Q96CH1 333 aa16.93■□□□□ 0.3
CDHR3-212ENST00000487084 ZNF436Q9C0F3 470 aaPredicted RBP16.93■□□□□ 0.3
CDHR3-212ENST00000487084 SRRQ9GZT4 340 aa16.93■□□□□ 0.3
CDHR3-212ENST00000487084 F8W735 103 aaPredicted RBP16.92■□□□□ 0.3
CDHR3-212ENST00000487084 I3L2K1 104 aa16.92■□□□□ 0.3
CDHR3-212ENST00000487084 MFAP4P55083 255 aa16.92■□□□□ 0.3
CDHR3-212ENST00000487084 SBSPONQ8IVN8 264 aa16.92■□□□□ 0.3
CDHR3-212ENST00000487084 TMEM190Q8WZ59 177 aa16.92■□□□□ 0.3
CDHR3-212ENST00000487084 GALNT14Q96FL9 552 aa16.92■□□□□ 0.3
CDHR3-212ENST00000487084 ATP6V0BQ99437 205 aa16.92■□□□□ 0.3
CDHR3-212ENST00000487084 C20orf24Q9BUV8 137 aa16.92■□□□□ 0.3
CDHR3-212ENST00000487084 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.92■□□□□ 0.3
CDHR3-212ENST00000487084 GAR1Q9NY12 217 aaKnown RBP16.92■□□□□ 0.3
CDHR3-212ENST00000487084 TMEM56-RWDD3S4R434 201 aa16.92■□□□□ 0.3
CDHR3-212ENST00000487084 IGHV3OR16-8A0A075B7F1 116 aa16.91■□□□□ 0.3
CDHR3-212ENST00000487084 ANXA3P12429 323 aa16.91■□□□□ 0.3
CDHR3-212ENST00000487084 SUB1P53999 127 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDHR3-212ENST00000487084 SPCS3P61009 180 aa16.91■□□□□ 0.3
CDHR3-212ENST00000487084 TRIQKQ629K1 86 aa16.91■□□□□ 0.3
CDHR3-212ENST00000487084 BTNL8Q6UX41 500 aa16.91■□□□□ 0.3
CDHR3-212ENST00000487084 WDR89Q96FK6 387 aaPredicted RBP16.91■□□□□ 0.3
CDHR3-212ENST00000487084 NDUFA13Q9P0J0 144 aa16.91■□□□□ 0.3
CDHR3-212ENST00000487084 MLXQ9UH92 298 aa16.91■□□□□ 0.3
CDHR3-212ENST00000487084 INS-IGF2F8WCM5 200 aa16.9■□□□□ 0.3
CDHR3-212ENST00000487084 NDUFA4O00483 81 aa16.9■□□□□ 0.3
CDHR3-212ENST00000487084 NUPL2O15504 423 aaKnown RBP16.9■□□□□ 0.3
CDHR3-212ENST00000487084 NXPH3O95157 252 aa16.9■□□□□ 0.3
CDHR3-212ENST00000487084 ADMP35318 185 aa16.9■□□□□ 0.3
CDHR3-212ENST00000487084 CD81P60033 236 aa16.9■□□□□ 0.3
CDHR3-212ENST00000487084 SUPT4H1P63272 117 aaKnown RBP16.9■□□□□ 0.3
CDHR3-212ENST00000487084 IL22RA2Q969J5 263 aa16.9■□□□□ 0.3
CDHR3-212ENST00000487084 MARC2Q969Z3 335 aa16.9■□□□□ 0.3
CDHR3-212ENST00000487084 U3KQK5 164 aa16.9■□□□□ 0.3
CDHR3-212ENST00000487084 COL7A1Q02388 2944 aa16.89■□□□□ 0.29
CDHR3-212ENST00000487084 ZNF785A8K8V0 405 aa16.89■□□□□ 0.29
CDHR3-212ENST00000487084 GNG7O60262 68 aa16.89■□□□□ 0.29
CDHR3-212ENST00000487084 RNASE2P10153 161 aaKnown RBP16.89■□□□□ 0.29
CDHR3-212ENST00000487084 ELLP55199 621 aaPredicted RBP16.89■□□□□ 0.29
CDHR3-212ENST00000487084 TMEM61Q8N0U2 210 aa16.89■□□□□ 0.29
CDHR3-212ENST00000487084 DEDD2Q8WXF8 326 aa16.89■□□□□ 0.29
CDHR3-212ENST00000487084 TXN2Q99757 166 aa16.89■□□□□ 0.29
CDHR3-212ENST00000487084 TUBA4BQ9H853 241 aa16.89■□□□□ 0.29
CDHR3-212ENST00000487084 DAZ1Q9NQZ3 744 aaKnown RBP16.89■□□□□ 0.29
CDHR3-212ENST00000487084 CEBPZOSA8MTT3 80 aa16.88■□□□□ 0.29
CDHR3-212ENST00000487084 ZNF207O43670 478 aaKnown RBP16.88■□□□□ 0.29
CDHR3-212ENST00000487084 SCAF4O95104 1147 aaKnown RBP16.88■□□□□ 0.29
CDHR3-212ENST00000487084 CTSGP08311 255 aa16.88■□□□□ 0.29
CDHR3-212ENST00000487084 SULT1A3P0DMM9 295 aa16.88■□□□□ 0.29
CDHR3-212ENST00000487084 SULT1A4P0DMN0 295 aa16.88■□□□□ 0.29
CDHR3-212ENST00000487084 SRPXP78539 464 aa16.88■□□□□ 0.29
CDHR3-212ENST00000487084 RELQ04864 619 aaPredicted RBP16.88■□□□□ 0.29
CDHR3-212ENST00000487084 LGI3Q8N145 548 aa16.88■□□□□ 0.29
CDHR3-212ENST00000487084 OR52E5Q8NH55 327 aa16.88■□□□□ 0.29
CDHR3-212ENST00000487084 SLC25A21Q9BQT8 299 aaPredicted RBP16.88■□□□□ 0.29
CDHR3-212ENST00000487084 NEURL2Q9BR09 285 aa16.88■□□□□ 0.29
CDHR3-212ENST00000487084 MRPL27Q9P0M9 148 aaKnown RBP16.88■□□□□ 0.29
CDHR3-212ENST00000487084 CORTO00230 105 aa16.87■□□□□ 0.29
CDHR3-212ENST00000487084 YIF1AO95070 293 aa16.87■□□□□ 0.29
CDHR3-212ENST00000487084 VAMP1P23763 118 aa16.87■□□□□ 0.29
CDHR3-212ENST00000487084 BAK1Q16611 211 aa16.87■□□□□ 0.29
CDHR3-212ENST00000487084 AARDQ4LEZ3 155 aa16.87■□□□□ 0.29
CDHR3-212ENST00000487084 LYZL2Q7Z4W2 148 aa16.87■□□□□ 0.29
CDHR3-212ENST00000487084 DUSP18Q8NEJ0 188 aa16.87■□□□□ 0.29
CDHR3-212ENST00000487084 HEYLQ9NQ87 328 aaPredicted RBP16.87■□□□□ 0.29
CDHR3-212ENST00000487084 A0A0B4J2A0 478 aa16.86■□□□□ 0.29
CDHR3-212ENST00000487084 LINC00854A0A1B0GVQ3 168 aa16.86■□□□□ 0.29
CDHR3-212ENST00000487084 CD7P09564 240 aa16.86■□□□□ 0.29
CDHR3-212ENST00000487084 C8orf88P0DMB2 117 aa16.86■□□□□ 0.29
CDHR3-212ENST00000487084 FCGR2BP31994 310 aaPredicted RBP16.86■□□□□ 0.29
CDHR3-212ENST00000487084 OPRK1P41145 380 aa16.86■□□□□ 0.29
CDHR3-212ENST00000487084 NPBWR1P48145 328 aa16.86■□□□□ 0.29
CDHR3-212ENST00000487084 TMEM128Q5BJH2 165 aa16.86■□□□□ 0.29
CDHR3-212ENST00000487084 RBPMS2Q6ZRY4 209 aaKnown RBP16.86■□□□□ 0.29
CDHR3-212ENST00000487084 C19orf73Q9NVV2 129 aa16.86■□□□□ 0.29
CDHR3-212ENST00000487084 SHPKQ9UHJ6 478 aa16.86■□□□□ 0.29
CDHR3-212ENST00000487084 CCR6P51684 374 aa16.85■□□□□ 0.29
CDHR3-212ENST00000487084 A8MZ25 164 aa16.84■□□□□ 0.29
CDHR3-212ENST00000487084 HTR2BP41595 481 aa16.84■□□□□ 0.29
CDHR3-212ENST00000487084 SMCO1Q147U7 214 aa16.84■□□□□ 0.29
CDHR3-212ENST00000487084 RBMS2Q15434 407 aaKnown RBP16.84■□□□□ 0.29
CDHR3-212ENST00000487084 NMSQ5H8A3 153 aa16.84■□□□□ 0.29
CDHR3-212ENST00000487084 WFDC10AQ9H1F0 79 aa16.84■□□□□ 0.29
CDHR3-212ENST00000487084 ZMAT4Q9H898 229 aa16.84■□□□□ 0.29
CDHR3-212ENST00000487084 PVRIGQ6DKI7 326 aa16.83■□□□□ 0.28
CDHR3-212ENST00000487084 SLC16A13Q7RTY0 426 aa16.83■□□□□ 0.28
CDHR3-212ENST00000487084 CENPSQ8N2Z9 138 aa16.83■□□□□ 0.28
CDHR3-212ENST00000487084 DEFB125Q8N687 156 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms