RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 RBM11P57052 281 aaKnown RBP2.8□□□□□ -1.96
PTCD3-216ENST00000487043 ACTBP60709 375 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 ACTG1P63261 375 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 TNFAIP6P98066 277 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-216ENST00000487043 NDPQ00604 133 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 BAMBIQ13145 260 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 GUCA2BQ16661 112 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 MPV17LQ2QL34 196 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 PIGYQ3MUY2 71 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 RNF212Q495C1 297 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 SPRNQ5BIV9 151 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 SPIN3Q5JUX0 258 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 TRIQKQ629K1 86 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 Q6P435 159 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 CLEC18BQ6UXF7 455 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 ACP7Q6ZNF0 438 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 ZNF826PQ6ZT77 177 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 LINC00596Q86U02 117 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 MUC15Q8N387 334 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 TOMM5Q8N4H5 51 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 C8orf31Q8N9H6 132 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 SUMF2Q8NBJ7 301 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 RDH5Q92781 318 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 ARHGAP5-AS1Q96IT6 56 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 ZNF488Q96MN9 340 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 OR2V2Q96R30 315 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 FAAP24Q9BTP7 215 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 PECRQ9BY49 303 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 SPACA1Q9HBV2 294 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 HES4Q9HCC6 221 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 C12orf4Q9NQ89 552 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 PLEKHJ1Q9NW61 149 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 RBFOX1Q9NWB1 397 aaKnown RBP2.8□□□□□ -1.96
PTCD3-216ENST00000487043 TAS2R8Q9NYW2 309 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 ZMAT5Q9UDW3 170 aaKnown RBP2.8□□□□□ -1.96
PTCD3-216ENST00000487043 MTFP1Q9UDX5 166 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 GLS2Q9UI32 602 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 MYO18BQ8IUG5 2567 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 SPTBN1Q01082 2364 aaKnown RBP2.8□□□□□ -1.96
PTCD3-216ENST00000487043 DOPEY1Q5JWR5 2465 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 ICE1Q9Y2F5 2266 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 LINC00854A0A1B0GVQ3 168 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 NAP1L6A6NFF2 107 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 RFPL4AA6NLU0 287 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 FAM25EA8MYX2 175 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 MCRIP1C9JLW8 97 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 RFPL4AL1F8VTS6 287 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 SMKR1H3BMG3 65 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 NUPL2O15504 423 aaKnown RBP2.79□□□□□ -1.96
PTCD3-216ENST00000487043 LYRM1O43325 122 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 INSP01308 110 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 CD8AP01732 235 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 MBP02144 154 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 CD74P04233 296 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 IGHV3-43DP0DP04 118 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 HLA-DMAP28067 261 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 GPX4P36969 197 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-216ENST00000487043 CTRLP40313 264 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 PPOXP50336 477 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 AP3S2P59780 193 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 LYZP61626 148 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 SNRPD2P62316 118 aaKnown RBP2.79□□□□□ -1.96
PTCD3-216ENST00000487043 GNB2P62879 340 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 CTAG1AP78358 180 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 CCL8P80075 99 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 COA6Q5JTJ3 125 aaKnown RBP2.79□□□□□ -1.96
PTCD3-216ENST00000487043 TEX36Q5VZQ5 186 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 C12orf54Q6X4T0 127 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 Q6ZS49 121 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 C6orf201Q7Z4U5 140 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 TRAPPC6BQ86SZ2 158 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 ZCCHC24Q8N2G6 241 aaKnown RBP2.79□□□□□ -1.96
PTCD3-216ENST00000487043 TMEM229BQ8NBD8 167 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 DUSP18Q8NEJ0 188 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 OR11L1Q8NGX0 322 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 LRRC29Q8WV35 223 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 CMSS1Q9BQ75 279 aaKnown RBP2.79□□□□□ -1.96
PTCD3-216ENST00000487043 SULT4A1Q9BR01 284 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 C7orf50Q9BRJ6 194 aaKnown RBP2.79□□□□□ -1.96
PTCD3-216ENST00000487043 CHST6Q9GZX3 395 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 RAB1BQ9H0U4 201 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 HRASLSQ9HDD0 168 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 DYNLRB1Q9NP97 96 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 ZC4H2Q9NQZ6 224 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 CBLN4Q9NTU7 201 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 ANAPC10Q9UM13 185 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 F11RQ9Y624 299 aaKnown RBP2.79□□□□□ -1.96
PTCD3-216ENST00000487043 CACNG2Q9Y698 323 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 USP9XQ93008 2570 aaPredicted RBP2.79□□□□□ -1.96
PTCD3-216ENST00000487043 FAM208BQ5VWN6 2430 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 ROS1P08922 2347 aa2.79□□□□□ -1.96
PTCD3-216ENST00000487043 RELNP78509 3460 aa2.78□□□□□ -1.96
PTCD3-216ENST00000487043 DYSFO75923 2080 aa2.78□□□□□ -1.96
PTCD3-216ENST00000487043 CHD3Q12873 2000 aaKnown RBP2.78□□□□□ -1.96
PTCD3-216ENST00000487043 IGKV1D-17A0A075B6S4 117 aa2.78□□□□□ -1.96
PTCD3-216ENST00000487043 TRBV6-6A0A0A6YYG2 114 aa2.78□□□□□ -1.96
PTCD3-216ENST00000487043 TRAV39A0A0B4J263 110 aa2.78□□□□□ -1.96
PTCD3-216ENST00000487043 TRAV38-1A0A0B4J264 116 aa2.78□□□□□ -1.96
PTCD3-216ENST00000487043 IGHV1-69-2A0A0G2JMI3 117 aa2.78□□□□□ -1.96
PTCD3-216ENST00000487043 A0A1W2PRD5 423 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms