RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 MRPL32Q9BYC8 188 aaKnown RBP9.95□□□□□ -0.82
COL3A1-206ENST00000487010 ZNF331Q9NQX6 463 aaPredicted RBP9.95□□□□□ -0.82
COL3A1-206ENST00000487010 ZNF71Q9NQZ8 489 aaPredicted RBP9.95□□□□□ -0.82
COL3A1-206ENST00000487010 MRPL27Q9P0M9 148 aaKnown RBP9.95□□□□□ -0.82
COL3A1-206ENST00000487010 TANC2Q9HCD6 1990 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 DSCAMO60469 2012 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 PRR33A8MZF0 331 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 CA1P00915 261 aaPredicted RBP9.94□□□□□ -0.82
COL3A1-206ENST00000487010 CT45A6P0DMU7 189 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 CT45A5P0DMU8 189 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 CT45A7P0DMV0 189 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 RNASE2P10153 161 aaKnown RBP9.94□□□□□ -0.82
COL3A1-206ENST00000487010 GNG10P50151 68 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 SLAQ13239 276 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 FAM201AQ5SY85 155 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 DMRTA1Q5VZB9 504 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 RASL11AQ6T310 242 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 Q6ZN92 141 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 C11orf42Q8N5U0 333 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 FAM169BQ8N8A8 192 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 NHLRC2Q8NBF2 726 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 OR1L8Q8NGR8 309 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 C18orf32Q8TCD1 76 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 BORCS7Q96B45 105 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 TXN2Q99757 166 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 SLC25A2Q9BXI2 301 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 WNT10AQ9GZT5 417 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 SLC25A15Q9Y619 301 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 YLPM1P49750 1951 aaKnown RBP9.94□□□□□ -0.82
COL3A1-206ENST00000487010 PSMB11A5LHX3 300 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 IGKV1-16P04430 117 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 HNRNPA3P51991 378 aaKnown RBP9.94□□□□□ -0.82
COL3A1-206ENST00000487010 SELENOVP59797 346 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 CD69Q07108 199 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 HES3Q5TGS1 186 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 DUX4L9Q6RFH8 374 aaPredicted RBP9.94□□□□□ -0.82
COL3A1-206ENST00000487010 KLHDC1Q8N7A1 406 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 STPG4Q8N801 248 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 ITLN1Q8WWA0 313 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 MBD6Q96DN6 1003 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 PPIAL4AQ9Y536 164 aa9.94□□□□□ -0.82
COL3A1-206ENST00000487010 TECTAO75443 2155 aa9.93□□□□□ -0.82
COL3A1-206ENST00000487010 TRAV5A0A0B4J249 113 aa9.93□□□□□ -0.82
COL3A1-206ENST00000487010 SIAH2O43255 324 aa9.93□□□□□ -0.82
COL3A1-206ENST00000487010 SPRY3O43610 288 aa9.93□□□□□ -0.82
COL3A1-206ENST00000487010 NTF3P20783 257 aa9.93□□□□□ -0.82
COL3A1-206ENST00000487010 MORN5Q5VZ52 161 aa9.93□□□□□ -0.82
COL3A1-206ENST00000487010 FAM231DQ6ZW35 169 aa9.93□□□□□ -0.82
COL3A1-206ENST00000487010 OR5B3Q8NH48 314 aa9.93□□□□□ -0.82
COL3A1-206ENST00000487010 FAM222BQ8WU58 562 aa9.93□□□□□ -0.82
COL3A1-206ENST00000487010 LINC00479Q96M42 142 aa9.93□□□□□ -0.82
COL3A1-206ENST00000487010 SSBP3Q9BWW4 388 aaPredicted RBP9.93□□□□□ -0.82
COL3A1-206ENST00000487010 BET1LQ9NYM9 111 aa9.93□□□□□ -0.82
COL3A1-206ENST00000487010 LAMTOR2Q9Y2Q5 125 aa9.93□□□□□ -0.82
COL3A1-206ENST00000487010 CBY1Q9Y3M2 126 aa9.93□□□□□ -0.82
COL3A1-206ENST00000487010 CDX4O14627 284 aaPredicted RBP9.92□□□□□ -0.82
COL3A1-206ENST00000487010 NDUFB8O95169 186 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 UBE2L3P68036 154 aaKnown RBP9.92□□□□□ -0.82
COL3A1-206ENST00000487010 ASPHD1Q5U4P2 390 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 SPACA3Q8IXA5 215 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 OR10W1Q8NGF6 305 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 CLEC7AQ9BXN2 247 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 DNAJC4Q9NNZ3 241 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 PROCRQ9UNN8 238 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 URB1O60287 2271 aaKnown RBP9.92□□□□□ -0.82
COL3A1-206ENST00000487010 KLF3P57682 345 aaPredicted RBP9.92□□□□□ -0.82
COL3A1-206ENST00000487010 PMCHL1Q16048 86 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 TNXAQ16473 311 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 STUMQ69YW2 141 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 SLC25A48Q6ZT89 311 aaKnown RBP9.92□□□□□ -0.82
COL3A1-206ENST00000487010 CACNG8Q8WXS5 425 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 SARAFQ96BY9 339 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 GRAMD2BQ96HH9 432 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 ZNF714Q96N38 554 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 GUCD1Q96NT3 240 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 LINC00574Q9H8X3 128 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 DKK4Q9UBT3 224 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 AMMECR1Q9Y4X0 333 aaPredicted RBP9.92□□□□□ -0.82
COL3A1-206ENST00000487010 KNTC1P50748 2209 aa9.92□□□□□ -0.82
COL3A1-206ENST00000487010 DLL1O00548 723 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 SAA1P0DJI8 122 aaPredicted RBP9.91□□□□□ -0.82
COL3A1-206ENST00000487010 MFAP2P55001 183 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 KLF5Q13887 457 aaPredicted RBP9.91□□□□□ -0.82
COL3A1-206ENST00000487010 TBR1Q16650 682 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 GDF5OSQ5U4N7 250 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 ALKBH2Q6NS38 261 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 ATOH7Q8N100 152 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 NUP35Q8NFH5 326 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 OR2T6Q8NHC8 308 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 ZNF355PQ9NSJ1 428 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 RAI1Q7Z5J4 1906 aaPredicted RBP9.91□□□□□ -0.82
COL3A1-206ENST00000487010 TNCP24821 2201 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 TCF21O43680 179 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 CCL11P51671 97 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 LCN12Q6JVE5 192 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 ZNF329Q86UD4 541 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 NUDT10Q8NFP7 164 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 NUDT11Q96G61 164 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 GAFA1Q96PS6 74 aa9.91□□□□□ -0.82
COL3A1-206ENST00000487010 NDUFA4L2Q9NRX3 87 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms