RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 DNASE2O00115 360 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-209ENST00000486618 TNFRSF11BO00300 401 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 ZNF593O00488 134 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-209ENST00000486618 PRYO14603 147 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 ANGPTL7O43827 346 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 OR7C2O60412 319 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 SEMG1P04279 462 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 H1F0P07305 194 aaKnown RBP5.37□□□□□ -1.55
HDAC3-209ENST00000486618 GZMMP51124 257 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 DLX1P56177 255 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 TAS2R30P59541 319 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 ZNF92Q03936 586 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 GNMTQ14749 295 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 SCGB2B2Q4G0G5 96 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 CLLU1Q5K131 121 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 FAM27D1Q5T7N8 215 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 SLC18B1Q6NT16 456 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 NAA40Q86UY6 237 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 MMD2Q8IY49 270 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 OSR2Q8N2R0 312 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 FTMTQ8N4E7 242 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 FAM24BQ8N5W8 94 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 BEST4Q8NFU0 473 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 OR52L1Q8NGH7 329 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 OR10R2Q8NGX6 335 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 OR5K1Q8NHB7 308 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 GATAD1Q8WUU5 269 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 DCUN1D4Q92564 292 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 ZNF799Q96GE5 643 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 ERMAPQ96PL5 475 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-209ENST00000486618 GPHA2Q96T91 129 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 ZNF184Q99676 751 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-209ENST00000486618 KCTD14Q9BQ13 255 aaPredicted RBP5.37□□□□□ -1.55
HDAC3-209ENST00000486618 SNHG12Q9BXW3 62 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 HEXA-AS1Q9H8Q6 139 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 ZNF702PQ9H963 129 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 IDI2-AS1Q9NZ38 188 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 ERG28Q9UKR5 140 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 U3KQK5 164 aa5.37□□□□□ -1.55
HDAC3-209ENST00000486618 A0A087WUU8 490 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 A0A087WX48 190 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 TRAV39A0A0B4J263 110 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 A0A1B0GX51 115 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 CDC42EP2O14613 210 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 ARPC2O15144 300 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 IFNA7P01567 189 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 IL6RP08887 468 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-209ENST00000486618 IL7P13232 177 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 CDKN2AP42771 156 aaKnown RBP5.36□□□□□ -1.55
HDAC3-209ENST00000486618 VDAC2P45880 294 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-209ENST00000486618 CAV3P56539 151 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 KRTAP10-11P60412 298 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 HSPE1P61604 102 aaKnown RBP5.36□□□□□ -1.55
HDAC3-209ENST00000486618 EGFEM1PQ0D2K5 195 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 FHL2Q14192 279 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 ZNF846Q147U1 533 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 WDR82Q6UXN9 313 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 ZNF788Q6ZQV5 615 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 FAM231DQ6ZW35 169 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 C11orf53Q8IXP5 236 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 OR2K2Q8NGT1 345 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 RPS4Y2Q8TD47 263 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 FGGYQ96C11 551 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 GPX7Q96SL4 187 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-209ENST00000486618 PDCD1LG2Q9BQ51 273 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 AGMATQ9BSE5 352 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 ELL3Q9HB65 397 aaPredicted RBP5.36□□□□□ -1.55
HDAC3-209ENST00000486618 TAF9BQ9HBM6 251 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 MRPL16Q9NX20 251 aaKnown RBP5.36□□□□□ -1.55
HDAC3-209ENST00000486618 EXOSC1Q9Y3B2 195 aaKnown RBP5.36□□□□□ -1.55
HDAC3-209ENST00000486618 DNAH3Q8TD57 4116 aa5.36□□□□□ -1.55
HDAC3-209ENST00000486618 IGLV1-36A0A0B4J1U3 117 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 A0A1W2PPI3 338 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 TCRBV4S1A1TA0A5B7 111 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.35□□□□□ -1.55
HDAC3-209ENST00000486618 J3KT08 172 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 SPINT2O43291 252 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 EDF1O60869 148 aaKnown RBP5.35□□□□□ -1.55
HDAC3-209ENST00000486618 NDUFB4O95168 129 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 SMIM17P0DL12 118 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 LMO1P25800 156 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 NUDT2P50583 147 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 RUNX1Q01196 453 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 SRSF7Q16629 238 aaKnown RBP eCLIP5.35□□□□□ -1.55
HDAC3-209ENST00000486618 ANXA2RQ3ZCQ2 193 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 GAGE13Q4V321 117 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 GLYATL3Q5SZD4 288 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 HCP5Q6MZN7 132 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 SHFQ7M4L6 423 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 SNX29P2Q8IUI4 249 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 H1FOOQ8IZA3 346 aaPredicted RBP5.35□□□□□ -1.55
HDAC3-209ENST00000486618 C11orf42Q8N5U0 333 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 PRR26Q8N8Z3 221 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 OR2T4Q8NH00 348 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 PIFOQ8TCI5 191 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 S100ZQ8WXG8 99 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 HIST1H2BAQ96A08 127 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 SMIM8Q96KF7 97 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 SCGB3A2Q96PL1 93 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms