RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 RELQ04864 619 aaPredicted RBP9.73□□□□□ -0.85
CHMP3-208ENST00000486404 PYDC2Q56P42 97 aa9.73□□□□□ -0.85
CHMP3-208ENST00000486404 RBPMS2Q6ZRY4 209 aaKnown RBP9.73□□□□□ -0.85
CHMP3-208ENST00000486404 FAM219AQ8IW50 185 aa9.73□□□□□ -0.85
CHMP3-208ENST00000486404 TMEM61Q8N0U2 210 aa9.73□□□□□ -0.85
CHMP3-208ENST00000486404 RBPMSQ93062 196 aaKnown RBP9.73□□□□□ -0.85
CHMP3-208ENST00000486404 SCGB3A2Q96PL1 93 aa9.73□□□□□ -0.85
CHMP3-208ENST00000486404 ZNF436Q9C0F3 470 aaPredicted RBP9.73□□□□□ -0.85
CHMP3-208ENST00000486404 C5orf66Q9H5L9 145 aa9.73□□□□□ -0.85
CHMP3-208ENST00000486404 C19orf73Q9NVV2 129 aa9.73□□□□□ -0.85
CHMP3-208ENST00000486404 MLXQ9UH92 298 aa9.73□□□□□ -0.85
CHMP3-208ENST00000486404 CRYM-AS1A6NIL9 109 aa9.72□□□□□ -0.85
CHMP3-208ENST00000486404 SCAF4O95104 1147 aaKnown RBP9.72□□□□□ -0.85
CHMP3-208ENST00000486404 MT-CO2P00403 227 aa9.72□□□□□ -0.85
CHMP3-208ENST00000486404 P0C879 139 aa9.72□□□□□ -0.85
CHMP3-208ENST00000486404 SUB1P53999 127 aaKnown RBP eCLIP9.72□□□□□ -0.85
CHMP3-208ENST00000486404 MFAP4P55083 255 aa9.72□□□□□ -0.85
CHMP3-208ENST00000486404 AP3S2P59780 193 aa9.72□□□□□ -0.85
CHMP3-208ENST00000486404 DHODHQ02127 395 aa9.72□□□□□ -0.85
CHMP3-208ENST00000486404 ANKRD55Q3KP44 614 aa9.72□□□□□ -0.85
CHMP3-208ENST00000486404 OR52B4Q8NGK2 314 aa9.72□□□□□ -0.85
CHMP3-208ENST00000486404 SPATA25Q9BR10 227 aa9.72□□□□□ -0.85
CHMP3-208ENST00000486404 CHRDL1Q9BU40 450 aa9.72□□□□□ -0.85
CHMP3-208ENST00000486404 NXF2Q9GZY0 626 aaKnown RBP9.72□□□□□ -0.85
CHMP3-208ENST00000486404 SRD5A3Q9H8P0 318 aa9.72□□□□□ -0.85
CHMP3-208ENST00000486404 MRPL27Q9P0M9 148 aaKnown RBP9.72□□□□□ -0.85
CHMP3-208ENST00000486404 TENM3Q9P273 2699 aa9.71□□□□□ -0.85
CHMP3-208ENST00000486404 A0A0B4J293 547 aa9.71□□□□□ -0.86
CHMP3-208ENST00000486404 CORTO00230 105 aa9.71□□□□□ -0.86
CHMP3-208ENST00000486404 GNG7O60262 68 aa9.71□□□□□ -0.86
CHMP3-208ENST00000486404 SCGB2A1O75556 95 aa9.71□□□□□ -0.86
CHMP3-208ENST00000486404 YIF1AO95070 293 aa9.71□□□□□ -0.86
CHMP3-208ENST00000486404 CD7P09564 240 aa9.71□□□□□ -0.86
CHMP3-208ENST00000486404 TMEM268Q5VZI3 342 aa9.71□□□□□ -0.86
CHMP3-208ENST00000486404 TM2D3Q9BRN9 247 aa9.71□□□□□ -0.86
CHMP3-208ENST00000486404 RTBDNQ9BSG5 229 aaPredicted RBP9.71□□□□□ -0.86
CHMP3-208ENST00000486404 IGHV3OR16-8A0A075B7F1 116 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 TRAV25A0A0B4J276 109 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 A0A0G2JRQ6 117 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 ZNF785A8K8V0 405 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 OR11H12B2RN74 326 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 F8W735 103 aaPredicted RBP9.7□□□□□ -0.86
CHMP3-208ENST00000486404 I3L2K1 104 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 ZNF207O43670 478 aaKnown RBP9.7□□□□□ -0.86
CHMP3-208ENST00000486404 CDS2O95674 445 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 IGHV3-48P01763 117 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 ANXA3P12429 323 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 ETV6P41212 452 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 HAGHQ16775 308 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 LAMTOR1Q6IAA8 161 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 TOMM5Q8N4H5 51 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 DEFB125Q8N687 156 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 TXN2Q99757 166 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 WFDC10AQ9H1F0 79 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.7□□□□□ -0.86
CHMP3-208ENST00000486404 CACNG5Q9UF02 275 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 GPR132Q9UNW8 380 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 KCNIP3Q9Y2W7 256 aa9.7□□□□□ -0.86
CHMP3-208ENST00000486404 CEBPZOSA8MTT3 80 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 INS-IGF2F8WCM5 200 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 C8orf88P0DMB2 117 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 AKR1C4P17516 323 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 FCGR2BP31994 310 aaPredicted RBP9.69□□□□□ -0.86
CHMP3-208ENST00000486404 ADMP35318 185 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 OPRK1P41145 380 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 NPBWR1P48145 328 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 SPCS3P61009 180 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 SRPXP78539 464 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 SPANXN2Q5MJ10 180 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 TMED4Q7Z7H5 227 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 DUSP18Q8NEJ0 188 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 LHFPL5Q8TAF8 219 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 GLYATL2Q8WU03 294 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 TRIM63Q969Q1 353 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 HEYLQ9NQ87 328 aaPredicted RBP9.69□□□□□ -0.86
CHMP3-208ENST00000486404 V9GYH0 126 aa9.69□□□□□ -0.86
CHMP3-208ENST00000486404 C15orf62A8K5M9 175 aa9.68□□□□□ -0.86
CHMP3-208ENST00000486404 ZNF701M0R085 212 aaPredicted RBP9.68□□□□□ -0.86
CHMP3-208ENST00000486404 CTSGP08311 255 aa9.68□□□□□ -0.86
CHMP3-208ENST00000486404 RNASE2P10153 161 aaKnown RBP9.68□□□□□ -0.86
CHMP3-208ENST00000486404 BMI1P35226 326 aa9.68□□□□□ -0.86
CHMP3-208ENST00000486404 INPP1P49441 399 aa9.68□□□□□ -0.86
CHMP3-208ENST00000486404 SELENOHQ8IZQ5 122 aaKnown RBP9.68□□□□□ -0.86
CHMP3-208ENST00000486404 IL22RA2Q969J5 263 aa9.68□□□□□ -0.86
CHMP3-208ENST00000486404 SPAG8Q99932 426 aaPredicted RBP9.68□□□□□ -0.86
CHMP3-208ENST00000486404 SOSTQ9BQB4 213 aa9.68□□□□□ -0.86
CHMP3-208ENST00000486404 GINS3Q9BRX5 216 aa9.68□□□□□ -0.86
CHMP3-208ENST00000486404 RBM38Q9H0Z9 239 aaKnown RBP9.68□□□□□ -0.86
CHMP3-208ENST00000486404 CACFD1Q9UGQ2 172 aa9.68□□□□□ -0.86
CHMP3-208ENST00000486404 PIGBOS1A0A0B4J2F0 54 aa9.67□□□□□ -0.86
CHMP3-208ENST00000486404 RPS10-NUDT3A0A1W2PQS6 291 aa9.67□□□□□ -0.86
CHMP3-208ENST00000486404 C3orf84H3BNL1 204 aa9.67□□□□□ -0.86
CHMP3-208ENST00000486404 K7EMT4 169 aa9.67□□□□□ -0.86
CHMP3-208ENST00000486404 NXPH3O95157 252 aa9.67□□□□□ -0.86
CHMP3-208ENST00000486404 SULT1A3P0DMM9 295 aa9.67□□□□□ -0.86
CHMP3-208ENST00000486404 SULT1A4P0DMN0 295 aa9.67□□□□□ -0.86
CHMP3-208ENST00000486404 HTR2BP41595 481 aa9.67□□□□□ -0.86
CHMP3-208ENST00000486404 KLF9Q13886 244 aaPredicted RBP9.67□□□□□ -0.86
CHMP3-208ENST00000486404 TMEM116Q8NCL8 245 aa9.67□□□□□ -0.86
CHMP3-208ENST00000486404 OR52E5Q8NH55 327 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms