RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 LYL1P12980 280 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 CTRB1P17538 263 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 SPCS3P61009 180 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 DEFA5Q01523 94 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 ZNF616Q08AN1 781 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 IAH1Q2TAA2 248 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-226ENST00000486210 CTRB2Q6GPI1 263 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 ZBTB8BQ8NAP8 495 aaPredicted RBP13.55□□□□□ -0.24
MCF2L-226ENST00000486210 OR4D5Q8NGN0 318 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 MS4A10Q96PG2 267 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 SRSF8Q9BRL6 282 aaKnown RBP13.55□□□□□ -0.24
MCF2L-226ENST00000486210 PLEKHA3Q9HB20 300 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 HSPB7Q9UBY9 170 aa13.55□□□□□ -0.24
MCF2L-226ENST00000486210 GOSR2O14653 212 aa13.54□□□□□ -0.24
MCF2L-226ENST00000486210 SSNA1O43805 119 aa13.54□□□□□ -0.24
MCF2L-226ENST00000486210 TNFRSF9Q07011 255 aa13.54□□□□□ -0.24
MCF2L-226ENST00000486210 KIAA0141Q14154 515 aaPredicted RBP13.54□□□□□ -0.24
MCF2L-226ENST00000486210 OR2C3Q8N628 320 aa13.54□□□□□ -0.24
MCF2L-226ENST00000486210 ZNF491Q8N8L2 437 aa13.54□□□□□ -0.24
MCF2L-226ENST00000486210 RBKSQ9H477 322 aa13.54□□□□□ -0.24
MCF2L-226ENST00000486210 ZNF355PQ9NSJ1 428 aa13.54□□□□□ -0.24
MCF2L-226ENST00000486210 DMRT1Q9Y5R6 373 aa13.54□□□□□ -0.24
MCF2L-226ENST00000486210 C5orf51A6NDU8 294 aa13.53□□□□□ -0.24
MCF2L-226ENST00000486210 HOXA1P49639 335 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-226ENST00000486210 RAB9AP51151 201 aa13.53□□□□□ -0.24
MCF2L-226ENST00000486210 RUNX1Q01196 453 aa13.53□□□□□ -0.24
MCF2L-226ENST00000486210 MYOZ3Q8TDC0 251 aa13.53□□□□□ -0.24
MCF2L-226ENST00000486210 WDR89Q96FK6 387 aaPredicted RBP13.53□□□□□ -0.24
MCF2L-226ENST00000486210 FANCD2OSQ96PS1 177 aa13.53□□□□□ -0.24
MCF2L-226ENST00000486210 OR5B12Q96R08 314 aa13.53□□□□□ -0.24
MCF2L-226ENST00000486210 MAGT1Q9H0U3 335 aa13.53□□□□□ -0.24
MCF2L-226ENST00000486210 GNB4Q9HAV0 340 aa13.53□□□□□ -0.24
MCF2L-226ENST00000486210 GSKIPQ9P0R6 139 aa13.53□□□□□ -0.24
MCF2L-226ENST00000486210 SORL1Q92673 2214 aa13.53□□□□□ -0.24
MCF2L-226ENST00000486210 CEBPZOSA8MTT3 80 aa13.52□□□□□ -0.25
MCF2L-226ENST00000486210 MFAP2P55001 183 aa13.52□□□□□ -0.25
MCF2L-226ENST00000486210 GSG1LQ6UXU4 331 aa13.52□□□□□ -0.25
MCF2L-226ENST00000486210 HSD17B13Q7Z5P4 300 aaPredicted RBP13.52□□□□□ -0.25
MCF2L-226ENST00000486210 C2orf50Q96LR7 162 aa13.52□□□□□ -0.25
MCF2L-226ENST00000486210 INS-IGF2F8WCM5 200 aa13.51□□□□□ -0.25
MCF2L-226ENST00000486210 I3L521 148 aa13.51□□□□□ -0.25
MCF2L-226ENST00000486210 OVOL1O14753 267 aa13.51□□□□□ -0.25
MCF2L-226ENST00000486210 TRGV3P03979 118 aa13.51□□□□□ -0.25
MCF2L-226ENST00000486210 IAPPP10997 89 aa13.51□□□□□ -0.25
MCF2L-226ENST00000486210 POLR2GP62487 172 aaKnown RBP eCLIP13.51□□□□□ -0.25
MCF2L-226ENST00000486210 ERHP84090 104 aaKnown RBP13.51□□□□□ -0.25
MCF2L-226ENST00000486210 ID3Q02535 119 aa13.51□□□□□ -0.25
MCF2L-226ENST00000486210 ZFAND6Q6FIF0 208 aa13.51□□□□□ -0.25
MCF2L-226ENST00000486210 ENY2Q9NPA8 101 aa13.51□□□□□ -0.25
MCF2L-226ENST00000486210 MGAT4CQ9UBM8 478 aa13.51□□□□□ -0.25
MCF2L-226ENST00000486210 F11RQ9Y624 299 aaKnown RBP13.51□□□□□ -0.25
MCF2L-226ENST00000486210 TRBV9A0A0B4J1U6 114 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 FAM90A26D6RGX4 464 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 H3BUA1 57 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 SAP30O75446 220 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 OR2J3O76001 311 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 BRI3O95415 125 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 SCGB1D2O95969 90 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 NKX2-1P43699 371 aaPredicted RBP13.5□□□□□ -0.25
MCF2L-226ENST00000486210 H2BFSP57053 126 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 TPPP2P59282 170 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 IL15RAQ13261 267 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 FCN2Q15485 313 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 KLK9Q2XQG4 91 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 DTD1Q8TEA8 209 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 CITED4Q96RK1 184 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 KLK9Q9UKQ9 250 aa13.5□□□□□ -0.25
MCF2L-226ENST00000486210 IGLV11-55A0A075B6I3 123 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 LINC01619G3V211 115 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 NDUFB8O95169 186 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 MBPP02686 304 aaPredicted RBP13.49□□□□□ -0.25
MCF2L-226ENST00000486210 RNASE2P10153 161 aaKnown RBP13.49□□□□□ -0.25
MCF2L-226ENST00000486210 DEFA4P12838 97 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 CXCL3P19876 107 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 RHOGP84095 191 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 SLC25A24Q6NUK1 477 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 ZNF114Q8NC26 417 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 OR11H7Q8NGC8 314 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 TMEM170AQ8WVE7 144 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 DCUN1D4Q92564 292 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 MED28Q9H204 178 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 SLA2Q9H6Q3 261 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 HEYLQ9NQ87 328 aaPredicted RBP13.49□□□□□ -0.25
MCF2L-226ENST00000486210 CACFD1Q9UGQ2 172 aa13.49□□□□□ -0.25
MCF2L-226ENST00000486210 WRBO00258 174 aa13.48□□□□□ -0.25
MCF2L-226ENST00000486210 SYNGR2O43760 224 aa13.48□□□□□ -0.25
MCF2L-226ENST00000486210 FRMD6-AS1P0C7T7 363 aa13.48□□□□□ -0.25
MCF2L-226ENST00000486210 BSXQ3C1V8 233 aa13.48□□□□□ -0.25
MCF2L-226ENST00000486210 Q6ZNX1 250 aa13.48□□□□□ -0.25
MCF2L-226ENST00000486210 OR1P1Q8NH06 330 aa13.48□□□□□ -0.25
MCF2L-226ENST00000486210 FBXL7Q9UJT9 491 aa13.48□□□□□ -0.25
MCF2L-226ENST00000486210 PLECQ15149 4684 aaKnown RBP13.48□□□□□ -0.25
MCF2L-226ENST00000486210 SSSCA1O60232 199 aa13.47□□□□□ -0.25
MCF2L-226ENST00000486210 MED6O75586 246 aa13.47□□□□□ -0.25
MCF2L-226ENST00000486210 TMEM50AO95807 157 aa13.47□□□□□ -0.25
MCF2L-226ENST00000486210 IGHV3-11P01762 117 aa13.47□□□□□ -0.25
MCF2L-226ENST00000486210 LGALS1P09382 135 aaKnown RBP13.47□□□□□ -0.25
MCF2L-226ENST00000486210 SNCAP37840 140 aa13.47□□□□□ -0.25
MCF2L-226ENST00000486210 ADAMTSL5Q6ZMM2 481 aa13.47□□□□□ -0.25
MCF2L-226ENST00000486210 KRTAP17-1Q9BYP8 105 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms