RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 LAMTOR1Q6IAA8 161 aa13.32□□□□□ -0.28
VIM-205ENST00000485947 ZNF562Q6V9R5 426 aa13.32□□□□□ -0.28
VIM-205ENST00000485947 C1QL4Q86Z23 238 aa13.32□□□□□ -0.28
VIM-205ENST00000485947 TMEM252Q8N6L7 170 aa13.32□□□□□ -0.28
VIM-205ENST00000485947 HINT2Q9BX68 163 aa13.32□□□□□ -0.28
VIM-205ENST00000485947 STRAPQ9Y3F4 350 aaKnown RBP13.32□□□□□ -0.28
VIM-205ENST00000485947 HSPB11Q9Y547 144 aa13.32□□□□□ -0.28
VIM-205ENST00000485947 U3KQ87 197 aa13.32□□□□□ -0.28
VIM-205ENST00000485947 A0A1W2PRX2 142 aa13.31□□□□□ -0.28
VIM-205ENST00000485947 FAM24AA6NFZ4 105 aa13.31□□□□□ -0.28
VIM-205ENST00000485947 MSGN1A6NI15 193 aa13.31□□□□□ -0.28
VIM-205ENST00000485947 IGF1P05019 195 aa13.31□□□□□ -0.28
VIM-205ENST00000485947 ELANEP08246 267 aa13.31□□□□□ -0.28
VIM-205ENST00000485947 S100A11P31949 105 aa13.31□□□□□ -0.28
VIM-205ENST00000485947 ERHP84090 104 aaKnown RBP13.31□□□□□ -0.28
VIM-205ENST00000485947 EWSR1Q01844 656 aaKnown RBP eCLIP13.31□□□□□ -0.28
VIM-205ENST00000485947 C10orf55Q5SWW7 151 aa13.31□□□□□ -0.28
VIM-205ENST00000485947 TMEM14EPQ6UXP3 125 aa13.31□□□□□ -0.28
VIM-205ENST00000485947 STX12Q86Y82 276 aa13.31□□□□□ -0.28
VIM-205ENST00000485947 RNF152Q8N8N0 203 aa13.31□□□□□ -0.28
VIM-205ENST00000485947 SRSF12Q8WXF0 261 aaKnown RBP13.31□□□□□ -0.28
VIM-205ENST00000485947 ZC4H2Q9NQZ6 224 aa13.31□□□□□ -0.28
VIM-205ENST00000485947 IGSF23A1L1A6 192 aa13.3□□□□□ -0.28
VIM-205ENST00000485947 CGB1A6NKQ9 187 aa13.3□□□□□ -0.28
VIM-205ENST00000485947 FCN1O00602 326 aa13.3□□□□□ -0.28
VIM-205ENST00000485947 CNIH1O95406 144 aa13.3□□□□□ -0.28
VIM-205ENST00000485947 HTR2BP41595 481 aa13.3□□□□□ -0.28
VIM-205ENST00000485947 GNB1P62873 340 aa13.3□□□□□ -0.28
VIM-205ENST00000485947 SSBP2P81877 361 aaPredicted RBP13.3□□□□□ -0.28
VIM-205ENST00000485947 FOXE3Q13461 319 aa13.3□□□□□ -0.28
VIM-205ENST00000485947 KHDC1LQ5JSQ8 128 aa13.3□□□□□ -0.28
VIM-205ENST00000485947 SPANXN5Q5MJ07 72 aa13.3□□□□□ -0.28
VIM-205ENST00000485947 C10orf99Q6UWK7 81 aa13.3□□□□□ -0.28
VIM-205ENST00000485947 TMUB2Q71RG4 321 aa13.3□□□□□ -0.28
VIM-205ENST00000485947 ZNF329Q86UD4 541 aa13.3□□□□□ -0.28
VIM-205ENST00000485947 NOL4LQ96MY1 436 aaPredicted RBP13.3□□□□□ -0.28
VIM-205ENST00000485947 MCRIP2Q9BUT9 160 aaKnown RBP13.3□□□□□ -0.28
VIM-205ENST00000485947 ARL6Q9H0F7 186 aa13.3□□□□□ -0.28
VIM-205ENST00000485947 KANTRA0A1W2PQU2 76 aa13.29□□□□□ -0.28
VIM-205ENST00000485947 H3BP45 60 aa13.29□□□□□ -0.28
VIM-205ENST00000485947 TAAR5O14804 337 aa13.29□□□□□ -0.28
VIM-205ENST00000485947 IFNA10P01566 189 aa13.29□□□□□ -0.28
VIM-205ENST00000485947 MYCNOSP40205 109 aa13.29□□□□□ -0.28
VIM-205ENST00000485947 SULT1A1P50225 295 aa13.29□□□□□ -0.28
VIM-205ENST00000485947 AP2S1P53680 142 aaPredicted RBP13.29□□□□□ -0.28
VIM-205ENST00000485947 CX3CL1P78423 397 aa13.29□□□□□ -0.28
VIM-205ENST00000485947 FXYD3Q14802 87 aa13.29□□□□□ -0.28
VIM-205ENST00000485947 BSXQ3C1V8 233 aa13.29□□□□□ -0.28
VIM-205ENST00000485947 OXLD1Q5BKU9 147 aa13.29□□□□□ -0.28
VIM-205ENST00000485947 SLC24A4Q8NFF2 622 aa13.29□□□□□ -0.28
VIM-205ENST00000485947 ARPC1AQ92747 370 aa13.29□□□□□ -0.28
VIM-205ENST00000485947 OR4C12Q96R67 309 aa13.29□□□□□ -0.28
VIM-205ENST00000485947 IGHV7-81A0A0B4J1V7 117 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 A0A1B0GW64 132 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 C15orf62A8K5M9 175 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 TEX22C9J3V5 150 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 E7EUB6 86 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 BCL2L11O43521 198 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 IGHG4P01861 327 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 NPY1RP25929 384 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 RAB11AP62491 216 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 HBG1P69891 147 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 HBG2P69892 147 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 OPCMLQ14982 345 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 C2orf83Q53S99 150 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 ARPC5LQ9BPX5 153 aa13.28□□□□□ -0.28
VIM-205ENST00000485947 ZMAT5Q9UDW3 170 aaKnown RBP13.28□□□□□ -0.28
VIM-205ENST00000485947 IGLC7A0M8Q6 106 aa13.27□□□□□ -0.29
VIM-205ENST00000485947 OR8U8P0C7N1 319 aa13.27□□□□□ -0.29
VIM-205ENST00000485947 SNCAP37840 140 aa13.27□□□□□ -0.29
VIM-205ENST00000485947 CDX1P47902 265 aaPredicted RBP13.27□□□□□ -0.29
VIM-205ENST00000485947 SUB1P53999 127 aaKnown RBP eCLIP13.27□□□□□ -0.29
VIM-205ENST00000485947 WT1-ASQ06250 92 aa13.27□□□□□ -0.29
VIM-205ENST00000485947 TMEM267Q0VDI3 215 aaPredicted RBP13.27□□□□□ -0.29
VIM-205ENST00000485947 LINC00482Q8N8I6 264 aa13.27□□□□□ -0.29
VIM-205ENST00000485947 ZNF114Q8NC26 417 aa13.27□□□□□ -0.29
VIM-205ENST00000485947 OR10W1Q8NGF6 305 aa13.27□□□□□ -0.29
VIM-205ENST00000485947 LINC01548A6NM66 108 aa13.26□□□□□ -0.29
VIM-205ENST00000485947 METTL15P1P0C7V9 234 aa13.26□□□□□ -0.29
VIM-205ENST00000485947 OR13C7P0DN81 318 aa13.26□□□□□ -0.29
VIM-205ENST00000485947 RNASE2P10153 161 aaKnown RBP13.26□□□□□ -0.29
VIM-205ENST00000485947 NHLH2Q02577 135 aa13.26□□□□□ -0.29
VIM-205ENST00000485947 CFHR3Q02985 330 aa13.26□□□□□ -0.29
VIM-205ENST00000485947 OR10P1Q8NGE3 313 aa13.26□□□□□ -0.29
VIM-205ENST00000485947 OR1S2Q8NGQ3 325 aa13.26□□□□□ -0.29
VIM-205ENST00000485947 ABHD5Q8WTS1 349 aa13.26□□□□□ -0.29
VIM-205ENST00000485947 PINX1Q96BK5 328 aaKnown RBP13.26□□□□□ -0.29
VIM-205ENST00000485947 TMEM68Q96MH6 324 aa13.26□□□□□ -0.29
VIM-205ENST00000485947 FBXL17Q9UF56 701 aa13.26□□□□□ -0.29
VIM-205ENST00000485947 PAIP2BQ9ULR5 123 aaKnown RBP13.26□□□□□ -0.29
VIM-205ENST00000485947 PMS2P5A8MQ11 134 aa13.25□□□□□ -0.29
VIM-205ENST00000485947 NUDT19A8MXV4 375 aa13.25□□□□□ -0.29
VIM-205ENST00000485947 DFFBO76075 338 aa13.25□□□□□ -0.29
VIM-205ENST00000485947 CST7O76096 145 aa13.25□□□□□ -0.29
VIM-205ENST00000485947 IGLL1P15814 213 aa13.25□□□□□ -0.29
VIM-205ENST00000485947 CRIP2P52943 208 aaPredicted RBP13.25□□□□□ -0.29
VIM-205ENST00000485947 NDPQ00604 133 aa13.25□□□□□ -0.29
VIM-205ENST00000485947 ATP6V1FQ16864 119 aa13.25□□□□□ -0.29
VIM-205ENST00000485947 SLC51BQ86UW2 128 aa13.25□□□□□ -0.29
VIM-205ENST00000485947 OR1L6Q8NGR2 347 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms