RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 RPL11P62913 178 aaKnown RBP10.19□□□□□ -0.78
SCAF4-206ENST00000485790 PRCDQ00LT1 54 aa10.19□□□□□ -0.78
SCAF4-206ENST00000485790 ODF3L2Q3SX64 289 aa10.19□□□□□ -0.78
SCAF4-206ENST00000485790 ZNF114Q8NC26 417 aa10.19□□□□□ -0.78
SCAF4-206ENST00000485790 C15orf40Q8WUR7 153 aa10.19□□□□□ -0.78
SCAF4-206ENST00000485790 AP3S1Q92572 193 aa10.19□□□□□ -0.78
SCAF4-206ENST00000485790 ZNF486Q96H40 463 aaPredicted RBP10.19□□□□□ -0.78
SCAF4-206ENST00000485790 OR10C1Q96KK4 312 aa10.19□□□□□ -0.78
SCAF4-206ENST00000485790 PDCD10Q9BUL8 212 aa10.19□□□□□ -0.78
SCAF4-206ENST00000485790 FXYD6Q9H0Q3 95 aa10.19□□□□□ -0.78
SCAF4-206ENST00000485790 DBX1A6NMT0 343 aa10.18□□□□□ -0.78
SCAF4-206ENST00000485790 FAM25AB3EWG3 89 aa10.18□□□□□ -0.78
SCAF4-206ENST00000485790 FAM25CB3EWG5 89 aa10.18□□□□□ -0.78
SCAF4-206ENST00000485790 FAM25GB3EWG6 89 aa10.18□□□□□ -0.78
SCAF4-206ENST00000485790 APRG1Q8IVJ8 170 aa10.18□□□□□ -0.78
SCAF4-206ENST00000485790 GATAD1Q8WUU5 269 aa10.18□□□□□ -0.78
SCAF4-206ENST00000485790 LINC00476Q8WZB0 136 aa10.18□□□□□ -0.78
SCAF4-206ENST00000485790 MRGPRFQ96AM1 343 aa10.18□□□□□ -0.78
SCAF4-206ENST00000485790 TMEM231Q9H6L2 316 aa10.18□□□□□ -0.78
SCAF4-206ENST00000485790 ENY2Q9NPA8 101 aa10.18□□□□□ -0.78
SCAF4-206ENST00000485790 EPPK1P58107 5090 aaKnown RBP10.17□□□□□ -0.78
SCAF4-206ENST00000485790 IGKV3-7A0A075B6H7 116 aa10.17□□□□□ -0.78
SCAF4-206ENST00000485790 A0A1W2PS18 150 aa10.17□□□□□ -0.78
SCAF4-206ENST00000485790 IFNA4P05014 189 aa10.17□□□□□ -0.78
SCAF4-206ENST00000485790 ELK1P19419 428 aa10.17□□□□□ -0.78
SCAF4-206ENST00000485790 RNASE10Q5GAN6 216 aaKnown RBP10.17□□□□□ -0.78
SCAF4-206ENST00000485790 GBGT1Q8N5D6 347 aa10.17□□□□□ -0.78
SCAF4-206ENST00000485790 ZFAND1Q8TCF1 268 aa10.17□□□□□ -0.78
SCAF4-206ENST00000485790 RRNAD1Q96FB5 475 aaKnown RBP10.17□□□□□ -0.78
SCAF4-206ENST00000485790 LYSTQ99698 3801 aa10.17□□□□□ -0.78
SCAF4-206ENST00000485790 RARRES2Q99969 163 aa10.17□□□□□ -0.78
SCAF4-206ENST00000485790 FUNDC2Q9BWH2 189 aa10.17□□□□□ -0.78
SCAF4-206ENST00000485790 MFFQ9GZY8 342 aa10.17□□□□□ -0.78
SCAF4-206ENST00000485790 IGHV3-49A0A0A0MS15 119 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 M0QYG6 137 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 CORTO00230 105 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 ST8SIA3O43173 380 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 HPGDSO60760 199 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 DFFBO76075 338 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 IGHV3-48P01763 117 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 TBPP20226 339 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 NPPCP23582 126 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 AKR1C2P52895 323 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 RND3P61587 244 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 VBP1P61758 197 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 TOMM20LQ6UXN7 152 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 ZNF600Q6ZNG1 722 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 TCF24Q7RTU0 167 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 ARRDC1Q8N5I2 433 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 SLC35G3Q8N808 338 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 NARS2Q96I59 477 aaKnown RBP10.16□□□□□ -0.78
SCAF4-206ENST00000485790 COPZ2Q9P299 210 aa10.16□□□□□ -0.78
SCAF4-206ENST00000485790 C3orf85A0A1B0GTC6 90 aa10.15□□□□□ -0.78
SCAF4-206ENST00000485790 B3GALNT1O75752 331 aa10.15□□□□□ -0.78
SCAF4-206ENST00000485790 TMEM50AO95807 157 aa10.15□□□□□ -0.78
SCAF4-206ENST00000485790 IGKV1-39P01597 117 aa10.15□□□□□ -0.78
SCAF4-206ENST00000485790 IGKV1D-39P04432 117 aa10.15□□□□□ -0.78
SCAF4-206ENST00000485790 PIGPP57054 158 aa10.15□□□□□ -0.78
SCAF4-206ENST00000485790 NCS1P62166 190 aa10.15□□□□□ -0.78
SCAF4-206ENST00000485790 TRIM16LQ309B1 348 aa10.15□□□□□ -0.78
SCAF4-206ENST00000485790 FAM90A2PQ658T7 463 aa10.15□□□□□ -0.78
SCAF4-206ENST00000485790 CCDC71LQ8N9Z2 235 aa10.15□□□□□ -0.78
SCAF4-206ENST00000485790 TERB2Q8NHR7 220 aa10.15□□□□□ -0.78
SCAF4-206ENST00000485790 RNASE11Q8TAA1 199 aaKnown RBP10.15□□□□□ -0.78
SCAF4-206ENST00000485790 IGHV3OR16-13A0A075B7E8 117 aa10.14□□□□□ -0.79
SCAF4-206ENST00000485790 IGHV3-74A0A0B4J1X5 117 aa10.14□□□□□ -0.79
SCAF4-206ENST00000485790 TRAV2A0A0B4J234 112 aa10.14□□□□□ -0.79
SCAF4-206ENST00000485790 A0A0B4J293 547 aa10.14□□□□□ -0.79
SCAF4-206ENST00000485790 INS-IGF2F8WCM5 200 aa10.14□□□□□ -0.79
SCAF4-206ENST00000485790 ZNF182P17025 639 aaPredicted RBP10.14□□□□□ -0.79
SCAF4-206ENST00000485790 ETV6P41212 452 aa10.14□□□□□ -0.79
SCAF4-206ENST00000485790 CENPSQ8N2Z9 138 aa10.14□□□□□ -0.79
SCAF4-206ENST00000485790 OR11H2Q8NH07 326 aa10.14□□□□□ -0.79
SCAF4-206ENST00000485790 C11orf45Q8TAV5 145 aa10.14□□□□□ -0.79
SCAF4-206ENST00000485790 PHLDA1Q8WV24 401 aaPredicted RBP10.14□□□□□ -0.79
SCAF4-206ENST00000485790 TMEM230Q96A57 120 aa10.14□□□□□ -0.79
SCAF4-206ENST00000485790 KLK11Q9UBX7 282 aa10.14□□□□□ -0.79
SCAF4-206ENST00000485790 PUS1Q9Y606 427 aaKnown RBP eCLIP10.14□□□□□ -0.79
SCAF4-206ENST00000485790 BIRC6Q9NR09 4857 aa10.13□□□□□ -0.79
SCAF4-206ENST00000485790 TRAV30A0A087WSZ9 112 aa10.13□□□□□ -0.79
SCAF4-206ENST00000485790 CD3DP04234 171 aa10.13□□□□□ -0.79
SCAF4-206ENST00000485790 PI3P19957 117 aa10.13□□□□□ -0.79
SCAF4-206ENST00000485790 EIF2B2P49770 351 aaKnown RBP10.13□□□□□ -0.79
SCAF4-206ENST00000485790 TMEM187Q14656 261 aa10.13□□□□□ -0.79
SCAF4-206ENST00000485790 GRAMD2BQ96HH9 432 aa10.13□□□□□ -0.79
SCAF4-206ENST00000485790 METTL26Q96S19 204 aa10.13□□□□□ -0.79
SCAF4-206ENST00000485790 MS4A6AQ9H2W1 248 aa10.13□□□□□ -0.79
SCAF4-206ENST00000485790 VSIRQ9H7M9 311 aa10.13□□□□□ -0.79
SCAF4-206ENST00000485790 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.13□□□□□ -0.79
SCAF4-206ENST00000485790 MTFP1Q9UDX5 166 aa10.13□□□□□ -0.79
SCAF4-206ENST00000485790 IGKV1-5P01602 117 aa10.12□□□□□ -0.79
SCAF4-206ENST00000485790 RPL5P46777 297 aaKnown RBP10.12□□□□□ -0.79
SCAF4-206ENST00000485790 HOXA1P49639 335 aaPredicted RBP10.12□□□□□ -0.79
SCAF4-206ENST00000485790 EWSR1Q01844 656 aaKnown RBP eCLIP10.12□□□□□ -0.79
SCAF4-206ENST00000485790 RBMS2Q15434 407 aaKnown RBP10.12□□□□□ -0.79
SCAF4-206ENST00000485790 SCGB2B2Q4G0G5 96 aa10.12□□□□□ -0.79
SCAF4-206ENST00000485790 SPINK9Q5DT21 86 aa10.12□□□□□ -0.79
SCAF4-206ENST00000485790 LHFPL1Q86WI0 220 aa10.12□□□□□ -0.79
SCAF4-206ENST00000485790 STHQ8IWL8 128 aa10.12□□□□□ -0.79
SCAF4-206ENST00000485790 TMEM229BQ8NBD8 167 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms