RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 ARSJQ5FYB0 599 aaPredicted RBP12.3□□□□□ -0.44
APOE-205ENST00000485628 TMEM65Q6PI78 240 aa12.3□□□□□ -0.44
APOE-205ENST00000485628 TMEM252Q8N6L7 170 aa12.3□□□□□ -0.44
APOE-205ENST00000485628 ZNF491Q8N8L2 437 aa12.3□□□□□ -0.44
APOE-205ENST00000485628 NECAP1Q8NC96 275 aa12.3□□□□□ -0.44
APOE-205ENST00000485628 OR11H4Q8NGC9 324 aa12.3□□□□□ -0.44
APOE-205ENST00000485628 RNASEH2CQ8TDP1 164 aaKnown RBP12.3□□□□□ -0.44
APOE-205ENST00000485628 MBD2Q9UBB5 411 aa12.3□□□□□ -0.44
APOE-205ENST00000485628 COL6A5A8TX70 2615 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 IGSF23A1L1A6 192 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 FAM24AA6NFZ4 105 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 FAM223BA6NKX1 122 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 NDUFB8O95169 186 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 IFNA10P01566 189 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 PET100P0DJ07 73 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 PVALBP20472 110 aaPredicted RBP12.29□□□□□ -0.44
APOE-205ENST00000485628 RPL23AP62750 156 aaKnown RBP12.29□□□□□ -0.44
APOE-205ENST00000485628 RPP30P78346 268 aaKnown RBP12.29□□□□□ -0.44
APOE-205ENST00000485628 RHOGP84095 191 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 ARL16Q0P5N6 197 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 SPANXN5Q5MJ07 72 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 NOXA1Q86UR1 476 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 FAM223AQ8IWN6 122 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 TMEM158Q8WZ71 300 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 USMG5Q96IX5 58 aa12.29□□□□□ -0.44
APOE-205ENST00000485628 STRAPQ9Y3F4 350 aaKnown RBP12.29□□□□□ -0.44
APOE-205ENST00000485628 F8W735 103 aaPredicted RBP12.28□□□□□ -0.44
APOE-205ENST00000485628 H3BP45 60 aa12.28□□□□□ -0.44
APOE-205ENST00000485628 CORTO00230 105 aa12.28□□□□□ -0.44
APOE-205ENST00000485628 RPLP1P05386 114 aaKnown RBP12.28□□□□□ -0.44
APOE-205ENST00000485628 DEFA4P12838 97 aa12.28□□□□□ -0.44
APOE-205ENST00000485628 FCGR2BP31994 310 aaPredicted RBP12.28□□□□□ -0.44
APOE-205ENST00000485628 MLANAQ16655 118 aa12.28□□□□□ -0.44
APOE-205ENST00000485628 SLC25A24Q6NUK1 477 aa12.28□□□□□ -0.44
APOE-205ENST00000485628 LCNL1Q6ZST4 164 aa12.28□□□□□ -0.44
APOE-205ENST00000485628 AKAP14Q86UN6 197 aa12.28□□□□□ -0.44
APOE-205ENST00000485628 VN1R17PQ8TDU5 208 aa12.28□□□□□ -0.44
APOE-205ENST00000485628 UBE2E2Q96LR5 201 aa12.28□□□□□ -0.44
APOE-205ENST00000485628 ATP6V0BQ99437 205 aa12.28□□□□□ -0.44
APOE-205ENST00000485628 ADARB2-AS1A8MUL3 147 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 SMLR1H3BR10 107 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 L7N2F9 121 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 OR2J3O76001 311 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 TRGV3P03979 118 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 PF4V1P10720 104 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 CD28P10747 220 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 GPX4P36969 197 aaPredicted RBP12.27□□□□□ -0.45
APOE-205ENST00000485628 CDX1P47902 265 aaPredicted RBP12.27□□□□□ -0.45
APOE-205ENST00000485628 RIPPLY3P57055 190 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 VAMP2P63027 116 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 CD69Q07108 199 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 EXOSC2Q13868 293 aaKnown RBP12.27□□□□□ -0.45
APOE-205ENST00000485628 THAP6Q8TBB0 222 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 SCARB1Q8WTV0 552 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 CACNG8Q8WXS5 425 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 MS4A10Q96PG2 267 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 AQP10Q96PS8 301 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 CITED1Q99966 193 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 THYN1Q9P016 225 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 FBXL7Q9UJT9 491 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 TNFSF18Q9UNG2 199 aa12.27□□□□□ -0.45
APOE-205ENST00000485628 RNF222A6NCQ9 220 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 MFSD2BA6NFX1 497 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 HMSDA8MTL9 139 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 FNDC10F2Z333 226 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 I3L521 148 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 CYB5BO43169 146 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 MT-CO2P00403 227 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 C1QBP02746 253 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 METTL15P1P0C7V9 234 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 SULT1A1P50225 295 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 RAB11AP62491 216 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 RUNX1Q01196 453 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 C15orf32Q32M92 178 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 ZNF343Q6P1L6 599 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 ETV3LQ6ZN32 361 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 TMEM116Q8NCL8 245 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 OR4X2Q8NGF9 303 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 ZNF502Q8TBZ5 544 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 ZNF414Q96IQ9 312 aa12.26□□□□□ -0.45
APOE-205ENST00000485628 MRPL36Q9P0J6 103 aaKnown RBP12.26□□□□□ -0.45
APOE-205ENST00000485628 A0A0G2JLM5 398 aa12.25□□□□□ -0.45
APOE-205ENST00000485628 RPL12P30050 165 aaKnown RBP12.25□□□□□ -0.45
APOE-205ENST00000485628 TPPP2P59282 170 aa12.25□□□□□ -0.45
APOE-205ENST00000485628 DEFA5Q01523 94 aa12.25□□□□□ -0.45
APOE-205ENST00000485628 EWSR1Q01844 656 aaKnown RBP eCLIP12.25□□□□□ -0.45
APOE-205ENST00000485628 NHLH2Q02577 135 aa12.25□□□□□ -0.45
APOE-205ENST00000485628 VWC2Q2TAL6 325 aa12.25□□□□□ -0.45
APOE-205ENST00000485628 BSCL2Q96G97 398 aaPredicted RBP12.25□□□□□ -0.45
APOE-205ENST00000485628 CXorf58Q96LI9 332 aa12.25□□□□□ -0.45
APOE-205ENST00000485628 CCDC140Q96MF4 163 aa12.25□□□□□ -0.45
APOE-205ENST00000485628 CITED2Q99967 270 aaPredicted RBP12.25□□□□□ -0.45
APOE-205ENST00000485628 SLC25A31Q9H0C2 315 aa12.25□□□□□ -0.45
APOE-205ENST00000485628 ZNF355PQ9NSJ1 428 aa12.25□□□□□ -0.45
APOE-205ENST00000485628 HAX1O00165 279 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 SCAF4O95104 1147 aaKnown RBP12.24□□□□□ -0.45
APOE-205ENST00000485628 IFNA4P05014 189 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 OR8U8P0C7N1 319 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 CAV2P51636 162 aa12.24□□□□□ -0.45
APOE-205ENST00000485628 ATP5G2Q06055 141 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms