RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 MAGT1Q9H0U3 335 aa15.39■□□□□ 0.05
COL6A2-208ENST00000485591 GSKIPQ9P0R6 139 aa15.39■□□□□ 0.05
COL6A2-208ENST00000485591 MFSD2BA6NFX1 497 aa15.38■□□□□ 0.05
COL6A2-208ENST00000485591 K7EIM0 57 aa15.38■□□□□ 0.05
COL6A2-208ENST00000485591 CCL24O00175 119 aa15.38■□□□□ 0.05
COL6A2-208ENST00000485591 GOSR2O14653 212 aa15.38■□□□□ 0.05
COL6A2-208ENST00000485591 LY86O95711 162 aa15.38■□□□□ 0.05
COL6A2-208ENST00000485591 PF4P02776 101 aa15.38■□□□□ 0.05
COL6A2-208ENST00000485591 NPY1RP25929 384 aa15.38■□□□□ 0.05
COL6A2-208ENST00000485591 OR11H1Q8NG94 326 aa15.38■□□□□ 0.05
COL6A2-208ENST00000485591 EEF1AKMT3Q96AZ1 226 aa15.38■□□□□ 0.05
COL6A2-208ENST00000485591 MISP3Q96FF7 219 aa15.38■□□□□ 0.05
COL6A2-208ENST00000485591 U3KQ87 197 aa15.38■□□□□ 0.05
COL6A2-208ENST00000485591 DNHD1Q96M86 4753 aa15.37■□□□□ 0.05
COL6A2-208ENST00000485591 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.37■□□□□ 0.05
COL6A2-208ENST00000485591 TRBV7-1A0A0A6YYK4 115 aa15.37■□□□□ 0.05
COL6A2-208ENST00000485591 WRBO00258 174 aa15.37■□□□□ 0.05
COL6A2-208ENST00000485591 SCGB1D2O95969 90 aa15.37■□□□□ 0.05
COL6A2-208ENST00000485591 HSPB1P04792 205 aaKnown RBP15.37■□□□□ 0.05
COL6A2-208ENST00000485591 IAPPP10997 89 aa15.37■□□□□ 0.05
COL6A2-208ENST00000485591 ATP5IP56385 69 aaPredicted RBP15.37■□□□□ 0.05
COL6A2-208ENST00000485591 POLR2GP62487 172 aaKnown RBP eCLIP15.37■□□□□ 0.05
COL6A2-208ENST00000485591 ZNF616Q08AN1 781 aa15.37■□□□□ 0.05
COL6A2-208ENST00000485591 NOXA1Q86UR1 476 aa15.37■□□□□ 0.05
COL6A2-208ENST00000485591 OR1N2Q8NGR9 330 aa15.37■□□□□ 0.05
COL6A2-208ENST00000485591 CCDC140Q96MF4 163 aa15.37■□□□□ 0.05
COL6A2-208ENST00000485591 DUX3Q96PT4 197 aa15.37■□□□□ 0.05
COL6A2-208ENST00000485591 PEF1Q9UBV8 284 aaKnown RBP15.37■□□□□ 0.05
COL6A2-208ENST00000485591 IGHV4OR15-8A0A075B7B6 117 aa15.36■□□□□ 0.05
COL6A2-208ENST00000485591 A0A087WW49 117 aa15.36■□□□□ 0.05
COL6A2-208ENST00000485591 I3L2K1 104 aa15.36■□□□□ 0.05
COL6A2-208ENST00000485591 IFNA10P01566 189 aa15.36■□□□□ 0.05
COL6A2-208ENST00000485591 MBPP02686 304 aaPredicted RBP15.36■□□□□ 0.05
COL6A2-208ENST00000485591 ZNF502Q8TBZ5 544 aa15.36■□□□□ 0.05
COL6A2-208ENST00000485591 SCARB1Q8WTV0 552 aa15.36■□□□□ 0.05
COL6A2-208ENST00000485591 TMEM170AQ8WVE7 144 aa15.36■□□□□ 0.05
COL6A2-208ENST00000485591 RANGRFQ9HD47 186 aaPredicted RBP15.36■□□□□ 0.05
COL6A2-208ENST00000485591 S4R3C0 116 aa15.36■□□□□ 0.05
COL6A2-208ENST00000485591 ANKRD34BA5PLL1 514 aa15.35■□□□□ 0.05
COL6A2-208ENST00000485591 LINC01619G3V211 115 aa15.35■□□□□ 0.05
COL6A2-208ENST00000485591 SSSCA1O60232 199 aa15.35■□□□□ 0.05
COL6A2-208ENST00000485591 MT-CO2P00403 227 aa15.35■□□□□ 0.05
COL6A2-208ENST00000485591 IL15RAQ13261 267 aa15.35■□□□□ 0.05
COL6A2-208ENST00000485591 RNASEH2CQ8TDP1 164 aaKnown RBP15.35■□□□□ 0.05
COL6A2-208ENST00000485591 DPF1Q92782 380 aa15.35■□□□□ 0.05
COL6A2-208ENST00000485591 PINX1Q96BK5 328 aaKnown RBP15.35■□□□□ 0.05
COL6A2-208ENST00000485591 ATP6V0BQ99437 205 aa15.35■□□□□ 0.05
COL6A2-208ENST00000485591 RCL1Q9Y2P8 373 aaKnown RBP15.35■□□□□ 0.05
COL6A2-208ENST00000485591 SIX6O95475 246 aa15.34■□□□□ 0.05
COL6A2-208ENST00000485591 TRBV12-3P01733 135 aa15.34■□□□□ 0.05
COL6A2-208ENST00000485591 IGHV3-23P01764 117 aa15.34■□□□□ 0.05
COL6A2-208ENST00000485591 OR8U8P0C7N1 319 aa15.34■□□□□ 0.05
COL6A2-208ENST00000485591 LINC00482Q8N8I6 264 aa15.34■□□□□ 0.05
COL6A2-208ENST00000485591 RAB40CQ96S21 281 aa15.34■□□□□ 0.05
COL6A2-208ENST00000485591 C21orf62Q9NYP8 219 aa15.34■□□□□ 0.05
COL6A2-208ENST00000485591 MGAT4CQ9UBM8 478 aa15.34■□□□□ 0.05
COL6A2-208ENST00000485591 IGHV3-21A0A0B4J1V1 117 aa15.33■□□□□ 0.04
COL6A2-208ENST00000485591 C15orf62A8K5M9 175 aa15.33■□□□□ 0.04
COL6A2-208ENST00000485591 OPRK1P41145 380 aa15.33■□□□□ 0.04
COL6A2-208ENST00000485591 H2BFSP57053 126 aa15.33■□□□□ 0.04
COL6A2-208ENST00000485591 RPP30P78346 268 aaKnown RBP15.33■□□□□ 0.04
COL6A2-208ENST00000485591 CLEC19AQ6UXS0 136 aa15.33■□□□□ 0.04
COL6A2-208ENST00000485591 SMIM8Q96KF7 97 aa15.33■□□□□ 0.04
COL6A2-208ENST00000485591 NMES1Q9C002 83 aa15.33■□□□□ 0.04
COL6A2-208ENST00000485591 F8W735 103 aaPredicted RBP15.32■□□□□ 0.04
COL6A2-208ENST00000485591 K7EPK0 472 aa15.32■□□□□ 0.04
COL6A2-208ENST00000485591 BMPR1BO00238 502 aa15.32■□□□□ 0.04
COL6A2-208ENST00000485591 ZP3P21754 424 aa15.32■□□□□ 0.04
COL6A2-208ENST00000485591 FCGR2BP31994 310 aaPredicted RBP15.32■□□□□ 0.04
COL6A2-208ENST00000485591 TAS2R30P59541 319 aa15.32■□□□□ 0.04
COL6A2-208ENST00000485591 CYCSP99999 105 aaKnown RBP15.32■□□□□ 0.04
COL6A2-208ENST00000485591 TREML4Q6UXN2 200 aa15.32■□□□□ 0.04
COL6A2-208ENST00000485591 OR4C12Q96R67 309 aa15.32■□□□□ 0.04
COL6A2-208ENST00000485591 MED28Q9H204 178 aa15.32■□□□□ 0.04
COL6A2-208ENST00000485591 FNDC4Q9H6D8 234 aaPredicted RBP15.32■□□□□ 0.04
COL6A2-208ENST00000485591 LSM5Q9Y4Y9 91 aaKnown RBP15.32■□□□□ 0.04
COL6A2-208ENST00000485591 WNK1Q9H4A3 2382 aa15.32■□□□□ 0.04
COL6A2-208ENST00000485591 RPS10-NUDT3A0A1W2PQS6 291 aa15.31■□□□□ 0.04
COL6A2-208ENST00000485591 PPP5D1E7EU14 171 aa15.31■□□□□ 0.04
COL6A2-208ENST00000485591 TMEM50AO95807 157 aa15.31■□□□□ 0.04
COL6A2-208ENST00000485591 CLEC3BP05452 202 aa15.31■□□□□ 0.04
COL6A2-208ENST00000485591 HOXD3P31249 432 aaPredicted RBP15.31■□□□□ 0.04
COL6A2-208ENST00000485591 GPR183P32249 361 aa15.31■□□□□ 0.04
COL6A2-208ENST00000485591 ARL3P36405 182 aa15.31■□□□□ 0.04
COL6A2-208ENST00000485591 SLURP1P55000 103 aa15.31■□□□□ 0.04
COL6A2-208ENST00000485591 MFAP4P55083 255 aa15.31■□□□□ 0.04
COL6A2-208ENST00000485591 PAX9P55771 341 aa15.31■□□□□ 0.04
COL6A2-208ENST00000485591 RAB11AP62491 216 aa15.31■□□□□ 0.04
COL6A2-208ENST00000485591 RAB32Q13637 225 aa15.31■□□□□ 0.04
COL6A2-208ENST00000485591 TXN2Q99757 166 aa15.31■□□□□ 0.04
COL6A2-208ENST00000485591 GAR1Q9NY12 217 aaKnown RBP15.31■□□□□ 0.04
COL6A2-208ENST00000485591 PSENENQ9NZ42 101 aa15.31■□□□□ 0.04
COL6A2-208ENST00000485591 STRAPQ9Y3F4 350 aaKnown RBP15.31■□□□□ 0.04
COL6A2-208ENST00000485591 H3BP45 60 aa15.3■□□□□ 0.04
COL6A2-208ENST00000485591 TSC22D2O75157 780 aa15.3■□□□□ 0.04
COL6A2-208ENST00000485591 IFNA4P05014 189 aa15.3■□□□□ 0.04
COL6A2-208ENST00000485591 S100A10P60903 97 aa15.3■□□□□ 0.04
COL6A2-208ENST00000485591 Q56UQ5 140 aa15.3■□□□□ 0.04
COL6A2-208ENST00000485591 SPANXN5Q5MJ07 72 aa15.3■□□□□ 0.04
COL6A2-208ENST00000485591 WFDC9Q8NEX5 89 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms